Template-based Modeling Results for NLPC_ECOLI


  Submitted Primary Sequence

>Length 154
MRFCLILITALLLAGCSHHKAPPPNARLSDSITVIAGLNDQLQSWHGTPYRYGGMTRRGVDCSGFVVVTMRDRFDLQLPRETKQQASIGTQIDKDELLPGDLVFFKTGSGQNGLHVGIYDTNNQFIHASTSKGVMRSSLDNVYWQKNFWQARRI
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MRFCLILITALLLAGCSHHKAPPPNARLSDSITVIAGLNDQLQSWHGTPYRYGGMTRRGVDCSGFVVVTMRDRFDLQLPRETKQQASIGTQIDKDELLPGDLVFFKTGSGQNGLHVGIYDTNNQFIHASTSKGVMRSSLDNVYWQKNFWQARRI
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHCCCCCEEEEECCCCCCCCEEEEEECCCEEEECCCCCCEEEECCCCHHHHHHCEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MRFCLILITALLLAGCSHHKAPPPNARLSDSITVIAGLNDQLQSWHGTPYRYGGMTRRGVDCSGFVVVTMRDRFDLQLPRETKQQASIGTQIDKDELLPGDLVFFKTGSGQNGLHVGIYDTNNQFIHASTSKGVMRSSLDNVYWQKNFWQARRI
4210010000000000133322323242232220010002101212111021102043100000000000123141301211310122123133320230000001011243000000000201000011231001011212102420110112
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMRFCLILITALLLAGCSHHKAPPPNARLSDSITVIAGLNDQLQSWHGTPYRYGGMTRRGVDCSGFVVVTMRDRFDLQLPRETKQQASIGTQIDKDELLPGDLVFFKTGSGQNGLHVGIYDTNNQFIHASTSKGVMRSSLDNVYWQKNFWQARRI
1MUSTER2k1gA0.4800.7994.277threading_1-----------------------------MNVDVKSRIMDQYADWKGVRYRLGGSTKKGIDCSGFVQRTFREQFGLELPRSTYEQQEMGKSVSRSNLRTGDLVLFRA--GSTGRHVGIYIGNNQFVHASTSSGVIISSMNEPYWKKRYNEARRV
2SPARKS2jyxa0.4880.7994.336threading_2-----------------------------MNVDVKSRIMDQYADWKGVRYRLGGSTKKGIDCSGFVQRTFREQFGLELPRSTYEQQEMGKSVSRSNLRTGDLVLFRAGST--GRHVGIYIGNNQFVHASTSSGVIISSMNEPYWKKRYNEARRV
3PROSPECT22jyxA0.4880.7993.044threading_3M-----------------------------NVDVKSRIMDQYADWKGVRYRLGGSTKKGIDCSGFVQRTFREQFGLELPRSTYEQQEMGKSVSRSNLRTGDLVLFRA--GSTGRHVGIYIGNNQFVHASTSSGVIISSMNEPYWKKRYNEARRV
4PPA-I2k1gA0.4800.7995.392threading_4-----------------------------MNVDVKSRIMDQYADWKGVRYRLGGSTKKGIDCSGFVQRTFREQFGLELPRSTYEQQEMGKSVSRSNLRTGDLVLFRA--GSTGRHVGIYIGNNQFVHASTSSGVIISSMNEPYWKKRYNEARRV
5HHPRED-l2jyx_A0.4840.7924.818threading_5-----------------------------MNVDVKSRIMDQYADWKGVRYRLGGSTKKGIDCSGFVQRTFREQFGLELPRSTYEQQEMGKSVSRSNLRTGDLVLFRAG--STGRHVGIYIGNNQFVHASTSSGVIISSMNEPYWKKRYNEARR-
6HHPRED-g2jyx_A0.4880.7994.243threading_6-----------------------------MNVDVKSRIMDQYADWKGVRYRLGGSTKKGIDCSGFVQRTFREQFGLELPRSTYEQQEMGKSVSRSNLRTGDLVLFRAGS--TGRHVGIYIGNNQFVHASTSSGVIISSMNEPYWKKRYNEARRV
7SP32jyxa0.4800.7993.775threading_7-----------------------------MNVDVKSRIMDQYADWKGVRYRLGGSTKKGIDCSGFVQRTFREQFGLELPRSTYEQQEMGKSVSRSNLRTGDLVLFRA--GSTGRHVGIYIGNNQFVHASTSSGVIISSMNEPYWKKRYNEARRV
8SAM-T992k1gA0.4800.7996.545threading_8-----------------------------MNVDVKSRIMDQYADWKGVRYRLGGSTKKGIDCSGFVQRTFREQFGLELPRSTYEQQEMGKSVSRSNLRTGDLVLFRA--GSTGRHVGIYIGNNQFVHASTSSGVIISSMNEPYWKKRYNEARRV
9MUSTER3h41A20.2540.8183.900threading_9--------------------------SQNDIPTPAADDLINTGKFLGLPYIWAGTSGFGFD-SGFTHTIYKSH-GITIPRDSGPQSRNGVAVDKEHLQKGDLIFFAHDQGKGSVHHVAYIGDGNIHSPRAERSVEIIPLNTPGYIEEYAGARRY
10SPARKS2k1ga0.4800.7994.310threading_10-----------------------------MNVDVKSRIMDQYADWKGVRYRLGGSTKKGIDCSGFVQRTFREQFGLELPRSTYEQQEMGKSVSRSNLRTGDLVLFRA--GSTGRHVGIYIGNNQFVHASTSSGVIISSMNEPYWKKRYNEARRV

  Predicted Tertiary Structure

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TM-score=0.515 to 2iobB
SCOP code=c.30.1.7
TM-score=0.515 to 2iobB
SCOP code=c.30.1.7
TM-score=0.516 to 2iobB
SCOP code=c.30.1.7
TM-score=0.524 to 2iobB
SCOP code=c.30.1.7
TM-score=0.515 to 2iobB
SCOP code=c.30.1.7