Template-based Modeling Results for NRFC_ECOLI

Submitted Primary Sequence

>Length 223
MTWSRRQFLTGVGVLAAVSGTAGRVVAKTLNINGVRYGMVHDESLCIGCTACMDACREVNKVPEGVSRLTIIRSEPQGEFPDVKYRFFRKSCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPYRVRFIHPVTKTADKCDFCRKTNLQAGKLPACVEACPTKALTFGNLDDPNSEISQLLRQKPTYRYKLALGTKPKLYRVPFKYGEVSQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTWSRRQFLTGVGVLAAVSGTAGRVVAKTLNINGVRYGMVHDESLCIGCTACMDACREVNKVPEGVSRLTIIRSEPQGEFPDVKYRFFRKSCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPYRVRFIHPVTKTADKCDFCRKTNLQAGKLPACVEACPTKALTFGNLDDPNSEISQLLRQKPTYRYKLALGTKPKLYRVPFKYGEVSQ
CCCCHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCEEEEEEEEHHHCCCCHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEEEEEEECCCCCCCCCHHHHCCCCCCEEECCCCCCEEECCCCCCCCHHHHHHCCCCCCEECCCCCEEECCCCCHHHHHHCCCCCHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCHHHCCCCCEEEECCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MTWSRRQFLTGVGVLAAVSGTAGRVVAKTLNINGVRYGMVHDESLCIGCTACMDACREVNKVPEGVSRLTIIRSEPQGEFPDVKYRFFRKSCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPYRVRFIHPVTKTADKCDFCRKTNLQAGKLPACVEACPTKALTFGNLDDPNSEISQLLRQKPTYRYKLALGTKPKLYRVPFKYGEVSQ
5532122012000000000000031123223242110000000210110200010024124123211101002123424232121100221011032000031011200022322000001231020010002001140110232222011020013101423320000200113000001132122200300432222212222122120010123323245
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MTWSRRQFLTGVGVLAAVSGTAGRVVAKTLNINGVRYGMVHDESLCIGCTACMDACREVNKVPEGVSRLTIIRSEPQGEFPDVKYRFFRKSCQHCDHAPCVDVCPTGASFRDAASGIVDVNPDLCVGCQYCIAACPYRVRFIHPVTKTADKCDFCRKTNLQAGKLPACVEACPTKALTFGNLDDPNSEISQLLRQKPTYRYKLALGTKPKLYRVPFKYGEVSQ
1	MUSTER	2vpzB	0.446	0.834	4.067	threading_1	---------------------------------MPRYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWIRER-EVGEYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQT-KDGLVLVDPKKCIACGACIAACPYDARYLHP-AGYVSKCTFC-AHRLEKGKVPACVETCPTYCRTFGDLEDPESPVAKALKAAERVDLRPEQGTRPKLFYLNSKKGLTRE
2	SPARKS	2vpwb	0.457	0.834	5.290	threading_2	---------------------------------MPRYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWIRERE-VGEYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQTK-DGLVLVDPKKCIACGACIAACPYDARYLHP-AGYVSKCTFC-AHRLEKGKVPACVETCPTYCRTFGDLEDPESPVAKALKAAEVDVLRPEQGTRPKLFYLPSKKGLTRE
3	PROSPECT2	2vpwB	0.446	0.834	4.679	threading_3	MP---------------------------------RYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWIRERE-VGEYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQT-KDGLVLVDPKKCIACGACIAACPYDARYLHP-AGYVSKCTFCAH-RLEKGKVPACVETCPTYCRTFGDLEDPESPVAKALKAAERDVLRPEQGTRPKLFYLNAPSKKGLH
4	PPA-I	2vpzB	0.441	0.834	7.851	threading_4	---------------------------------MPRYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWIRERE-VGEYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQT-KDGLVLVDPKKCIACGACIAACPYDARYLHP-AGYVSKCTFC-AHRLEKGKVPACVETCPTYCRTFGDLEDPESPVAKALKAAERDVLRPEQGTRPKLFYLNAPSKKGLT
5	HHPRED-l	2ivf_B	0.293	0.843	5.266	threading_5	---------------------------------KRQLVTVIDLNKCLGCQTCTVACKNIWTKRPGTRWNNVTTYPGGGKWPNPFFFYLARMCNHCTNPACLAACPTGAIYKREDNGIVLVDQERCKGHRHCVEACPYKAIYFNPVSQTSEKCILCY-PRIEKGIANACNRQCPGRVRAFGYLDDTTSHVHKLVKKWKALPLHAEYGTGPNIYYVPPMGARGG-
6	HHPRED-g	2ivf_B	0.291	0.848	4.999	threading_6	---------------------------------KRQLVTVIDLNKCLGCQTCTVACKNIWTKRPGTEHMRVTTYQGGGKWPNPFFFYLARMCNHCTNPACLAACPTGAIYKREDNGIVLVDQERCKGHRHCVEACPYKAIYFNPVSQTSEKCILCYP-RIEKGIANACNRQCPGRVRAFGYLDDTTSHVHKLVKKWKALPLHAEYGTGPNIYYVPPMGARGFG
7	SP3	2vpwb	0.446	0.834	4.851	threading_7	---------------------------------MPRYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWIRERE-VGEYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQTK-DGLVLVDPKKCIACGACIAACPYDARYLHP-AGYVSKCTFC-AHRLEKGKVPACVETCPTYCRTFGDLEDPESPVAKALKAAEVDVLRPEQGTRPKLFYLNAPSGLTRE
8	SAM-T99	2vpzB	0.469	0.794	6.098	threading_8	MP---------------------------------RYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWI-REREVGEYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQT-KDGLVLVDPKKCIACGACIAACPYDARYLHPA-GYVSKCTFCAHR-LEKGKVPACVETCPTYCRTFGDLEDPESPVAKALKAAEVDVLRPEQGTRPKLFYL---------
9	MUSTER	1ti4B1	0.273	0.821	3.602	threading_9	---------------------------------MEQYYMVIDVAKCQDCNNCFMGCMDEHELNEGHRWMNIERR-ERGTYPRNDINYRPTPCMHCENAPCV-AKGNGAVYQR-EDGIVLIDPEKAKGKKELLDTCPYGVMYWNEEENVAQKCTMCAHLLDDAPKMPRCAHNCGSFV--YEFLKTTPEAMAKKVEEEGLEVIKPELGTKPRVYYKNLYRFEK--
10	SPARKS	1kqfb	0.252	0.960	5.283	threading_10	-AMETQDIIKR-------SATNSITPPSQVRDYKAEVAKLIDVSTCIGCKACQVACSEWNDIRDEVGHCTVMRFSETEQNGKLEWLIRKDGCMHCEDPGCLKACPSAGAIIQYANGIVDFQSENCIGCGYCIAGCPFNIPRLNKEDNRVYKCTLCVDRV-SVGQEPACVKTCPTGAIHFGTKKEMLELAEQRVAKLKARGYEPEGVGGTHVMYVLHHADQPEL

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.767 to 1ti4B SCOP code=b.3.5.1	TM-score=0.774 to 1ti4B SCOP code=b.3.5.1	TM-score=0.762 to 1ti4B SCOP code=b.3.5.1	TM-score=0.771 to 1ti4B SCOP code=b.3.5.1	TM-score=0.776 to 1ti4B SCOP code=b.3.5.1