Template-based Modeling Results for NRFE_ECOLI


  Submitted Primary Sequence

>Length 552
MLTPLTAFAGVRLRWPAMMRLTCIGILAQFALLLLAFGVLTYCFLISDFSVIYVAQHSYSLLSWELKLAAVWGGHEGSLLLWVLLLSAWSALFAWHYRQQTDPLFPLTLAVLSLMLAALLLFVVLWSDPFVRIFPPAIEGRDLNPMLQHPGLIFHPPLLYLGYGGLMVAASVALASLLRGEFDGACARICWRWALPGWSALTAGIILGSWWAYCELGWGGWWFWDPVENASLLPWLSATALLHSLSLTRQRGIFCHWSLLLAIVTLMLSLLGTLIVRSGILVSVHAFALDNVRAVPLFSLFALISLASLALYGWRARDGGPAVHFSGLSREMLILATLLLFCAVLLIVLVGTLYPMIYGLLGWGRLSVGAPYFNRATLPFGLLMLVVIVLATFVSGKRVQLPALVAHAGVLLFAAGVVVSSVSRQEISLNLQPGQQVTLAGYTFRFECLDLQAKGNYTSEKAIVALFDHQQRIGELTPERRFYEARRQQMMEPSIRWNGIHDWYAVMGEKTGPDRYAFRLYVQSGVRWIWGGGLLMIAGALLSGWRGKKRDE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLTPLTAFAGVRLRWPAMMRLTCIGILAQFALLLLAFGVLTYCFLISDFSVIYVAQHSYSLLSWELKLAAVWGGHEGSLLLWVLLLSAWSALFAWHYRQQTDPLFPLTLAVLSLMLAALLLFVVLWSDPFVRIFPPAIEGRDLNPMLQHPGLIFHPPLLYLGYGGLMVAASVALASLLRGEFDGACARICWRWALPGWSALTAGIILGSWWAYCELGWGGWWFWDPVENASLLPWLSATALLHSLSLTRQRGIFCHWSLLLAIVTLMLSLLGTLIVRSGILVSVHAFALDNVRAVPLFSLFALISLASLALYGWRARDGGPAVHFSGLSREMLILATLLLFCAVLLIVLVGTLYPMIYGLLGWGRLSVGAPYFNRATLPFGLLMLVVIVLATFVSGKRVQLPALVAHAGVLLFAAGVVVSSVSRQEISLNLQPGQQVTLAGYTFRFECLDLQAKGNYTSEKAIVALFDHQQRIGELTPERRFYEARRQQMMEPSIRWNGIHDWYAVMGEKTGPDRYAFRLYVQSGVRWIWGGGLLMIAGALLSGWRGKKRDE
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHEEEEEECCCCEEEECCEEEEEEEEEECCCCCEEEEEEEEEEEECCEEEEEEEHHHHHCCCCCCCCCHHHHHCCCCCHHEEECCEECCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MLTPLTAFAGVRLRWPAMMRLTCIGILAQFALLLLAFGVLTYCFLISDFSVIYVAQHSYSLLSWELKLAAVWGGHEGSLLLWVLLLSAWSALFAWHYRQQTDPLFPLTLAVLSLMLAALLLFVVLWSDPFVRIFPPAIEGRDLNPMLQHPGLIFHPPLLYLGYGGLMVAASVALASLLRGEFDGACARICWRWALPGWSALTAGIILGSWWAYCELGWGGWWFWDPVENASLLPWLSATALLHSLSLTRQRGIFCHWSLLLAIVTLMLSLLGTLIVRSGILVSVHAFALDNVRAVPLFSLFALISLASLALYGWRARDGGPAVHFSGLSREMLILATLLLFCAVLLIVLVGTLYPMIYGLLGWGRLSVGAPYFNRATLPFGLLMLVVIVLATFVSGKRVQLPALVAHAGVLLFAAGVVVSSVSRQEISLNLQPGQQVTLAGYTFRFECLDLQAKGNYTSEKAIVALFDHQQRIGELTPERRFYEARRQQMMEPSIRWNGIHDWYAVMGEKTGPDRYAFRLYVQSGVRWIWGGGLLMIAGALLSGWRGKKRDE
321100110113121200110000000000000000000000000011000000011112211100100000111200000000000000000012133223200000000000000000000001111112012112213311111210000000000000000000000000000021312010020011001000000000000001000022011000010010000000000000000010023221200000000000000000000000210101211011223221100000000000000001013243223222221212200000010000000000000000100001012130111011112000000000000000010020122100100000000000000001101311100202212102022010101101222312120110101002342200201011211313323001000211001100000012133220000000100010000000000000000023244444
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMLTPLTAFAGVRLRWPAMMRLTCIGILAQFALLLLAFGVLTYCFLISDFSVIYVAQHSYSLLSWELKLAAVWGGHEGSLLLWVLLLSAWSALFAWHYRQQTDPLFPLTLAVLSLMLAALLLFVVLWSDPFVRIFPPAIEGRDLNPMLQHPGLIFHPPLLYLGYGGLMVAASVALASLLRGEFDGACARICWRWALPGWSALTAGIILGSWWAYCELGWGGWWFWDPVENASLLPWLSATALLHSLSLTRQRGIFCHWSLLLAIVTLMLSLLGTLIVRSGILVSVHAFALDNVRAVPLFSLFALISLASLALYGWRARDGGPAVHFSGLSREMLILATLLLFCAVLLIVLVGTLYPMIYGLLGWGRLSVGAPYFNRATLPFGLLMLVVIVLATFVSGKRVQLPALVAHAGVLLFAAGVVVSSVSRQEISLNLQPGQQVTLAGYTFRFECLDLQAKGNYTSEKAIVALFDHQQRIGELTPERRFYEARRQQMMEPSIRWNGIHDWYAVMGEKTGPDRYAFRLYVQSGVRWIWGGGLLMIAGALLSGWRGKKRDE
1SPARKS2xwub0.1110.9171.018threading_1LKAQLFTQITRFASGS-------KIVLTRLCVALASLALSMMPDAWPCA-VADMVRLFQAPVD-------------GQGRCLALLELLTVLPEEFQTSRLPQYRKGLVRTSLAVCGAVFPLLEQLLQQPSSKVLKCFSSWVQLEVPLQDCEALIQAAFAALQDSELFDSSVEAIVNAISQPRYVNTLLKLIPLVLGLQEQLRQAVQNG----------------DMETSHGICRIAVALGENHSRALLDQVEHWQSFLALVNMIMFCTGIPGHYPVNETTSSLTLTFSFEAEKQAVYQQVYRPVYFQLVDVLLHKAQFPSDEEYGFWSSQFRIYRVDISDTLMYVYEMLGAELLSNLYDKLGRLLTSYSWQHTEALLYGFQSIADVVPGLIGLIPRISISNVQLADTVMFTIGALSEWLADHPVMINSVALGNPELSVSSVSTLKKRECKYDLPPYAANIVAVSDVLMKQQCMWLMQALGFLLSALQVEEILKNLHS-LISPYIQQLEKLAEEI--------PNPSNKLAIVHILGLLSNLFTTLDISHPNP
2PROSPECT23a6pA10.0990.7502.101threading_2LCEQLVKAVTVMMDPEEFKEKCPICVPCGLRLVRHFGLQILEHVVKFRWNMELIANGTL-------------NILEEENHIKDALSRIVVEMIKREWPQHWPDMLIELDTLSKQGETQTELVMFILLRLAEDVVTFQTLPPQRRRDIQQ-TLTQNMERIFSFLLNTLQENVNKYQQVKTDTSQESKAQANCRVGVAALNTLA-----------------GYIDWVSMSHITLLEILCLAAECLLIAVSRKGKLEDRKPLMVLFGDVAMHYILSAAQT----------ADGGGLVEKHYVFLKRLCQVLCALGNQLCALLGADSDVETPSNFGKYLESFLAFTTHPSQFLRSSTQMTWGALFRHEILS-RDPLLLAIIPKYLRASMTNLVKMGFPSKTDSPSCEYSRFDFDSDEDFNAFFNSSRAQ--------------------------------------------------------------------------QGEV----------------------MRLACRLDPKTSFQMAGEWLKYQLSTF
3PROSPECT21b3ua0.1050.8592.045threading_3TRSELLPFLTDTIYDEDEVLLALAEQLGTFTYVHCLLPPLESLATVEETVVRDKAVES------LRAISHEHSPSDLEAHFVPLVKRLACGLFSVCYPRVSSAVKAELRQYFRNLAAASKLGEFAKVLELDNVKSEIIPMSDEQDSVRLLAVEACVNIAQLLPQEDLEALVMPTLRQAAEDKSWRVRYMVADKFTELQKAVGPEITKTDLVPAFQNLMKDC---EAEVRAAASHKVKEFCILPCIKELVSDANQHVKSALASVIMGLSPILGKDNTIEHLLPLFLAQLKDECPEVRLNIIVNEVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWLVDHV-----YAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMYLHRMTTLFCINVLSEVCGQDITTKHM--------------------------------------------LPTVLRMAGDPVANVRFNVAK--SLQKIGPILD------------------NSTLQSEVKPILEKLTQDQDVDVKYF
4PROSPECT21jdha0.0900.7832.041threading_4VNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQCTAGTLHNLSHHREGLLAIFKSG-GIPALVKM-----LGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQVKFLAITTDCLQILAYGNQESK-----------LIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRA---------------GDREDITEPAICALRHLEMAQNAVRLHYGLPVVVKLLHPPSHWPL-----IKATVGLIRNLALCPANHAPLREQGAIPRLVQLLVRAHQDTMEEIVEGCTGALHILARDVHNRIVIRGLNTIPLFVQLLYSPIENIQR--------------------------------------------------------------VAAGVLCELAQDKEA---------------------AEAIEAEGATAPLTELLHSRNEGVATY
5PROSPECT21qgra0.1070.9982.037threading_5MLVELSRVLSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLHTLGTETYACAEIPVNQWPELIPQLVANVTNPNSTEHMKESTLEAIGYICIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMELFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQYLVPILAAGVCLMLLATCCEDDIVPHVDTAAWTVGRICELLPEAAINDVYLAPLLQCLIEGLSAEPRVASNVCWAFSSLAEAAYEAADVADDQEEPATYRSSAYESLMEIVKYPAVQKTTLVIMERLQQVLQMESHIQSTSDRIQFNDLQSLLCATLVMASLLRMFSGGVQEDALMAVSTLVEVLGGEFLKYMEAGIGLKNYAEYQVCLAAVGLVMQLLLENLGNENVHRSVKPQILSVFGDIALAIGGQQASQAQVDKSDYDMVDYLNYTGIVQGLKGDQENVHPDVM-LVQPRVEFILVACAAGLIGDLCTAFGKDVNQA
6PROSPECT22bkuB0.0891.0001.942threading_6FAGLSSQVLIDENTKLEGRILAALTLTQQFAQRWIQIKTNALTALVSIIAAIADIELPHGAWPELMKIMVDNTGAEQPENVKRASLLALGYMCESADALVSSSNNILIAIVQGAVRLAALNALADSLIFIKNNMEREGERNYLMQVVAEDIEVQAAAFGCLCKIMSKYYLYALTIATMKSPNDKVASMTVEFWSTICEEEIDIAVVPNLLNLLTRQNEDPEDDDWNVSMSAGACLQLFAQNCGNHILEPVLEFVEQNETTAWCIGRIADSVAESIDPQQHLPGVVQACLIGLQDHPKVATNCSWTIINLVEQLAEATPSPIYNFNRIDNEFNARASAFSALTTMVSASISTFVMDKLGQTMSVDENQLTLEDAQSLQELQSNILTVLAAVPSSVEPVADMLMGLFFRLDDVFYAISALAASLGKGFEKYALNQVDSSNSLEEDFRLAQMISNPNARRELKPAVLSVADFIPYLNDIMALCVAAQNTKPENGTLEALDYQIKDAYVGIVAGLHDKPEALFPYVGTIFQFIASRAAVGLIGDIAAMFPDGSIKQ
7MUSTER3orgA0.1500.8550.891threading_7-------------------SLMYLLRLVCFLTLLGVTAALFIFAV--DLAVHGLEE---------LRMKISRAGRFAGYILYVVSGVALCLLSTFWCAVLSTEAE--LPQMKSILSG------------FYDKMRSALELRVL--FAKALGLICAIGGLPVGWEGPNVHIACIIAHQFYGVFKELCTRALRLQTLAAACAVGLASSFGGGVLYSIETIASFYL------QAFWKGVLSALSGAIVYELDVSRT---QTLLYAILGALMGVLGALFIR--CVRSIYELRMRHYPGTNRYFLVGVVALFASALQY--FPRATINDLFKAVTELILMPIIKFILVALSIGLPAGVFVPSFLIGAGFGRL-YGE-LMRVVFVPGSYAVVGAAAFTAGVTRALSCAVIIFEVTGLVPVLISVLLAVIYETLVLMKMHPIEGEPHLFPDSEPQHIKGIKFPNRL----VFPVIDANGYLLGAISRKEIVDRLQHVVV-----PCDVSPIVVTSYSLVRQ---LHFLFVMLMPSMI--GKLV----GIVEREDYGYSN-
8SPARKS3m1ic0.0920.8860.938threading_8IRNFVVGMIISMCQDDEVFKTQ-KNLINKSDLTLVQILKQEWPQNWPEF-IPELIGSSSS-------------SVNVCENNMIVLKLLSEEVFDFSAEQMTLHLKNSMSKEFEQIFKLCFQVLEQGSSSTLESLLRYLHWIPYRYIYETNILELLS-TKFMTSPDTRAITLKCLTEVSNLKIPQDNDLIKRQTVLFFQNTLQQIAVTADLKATYANANG-----NDQSFLQDLAMFLTTYLARNRALLESDESLRELLLNAHQYLIQLSKIEERELFKTTLDYWHNLVYEPLKKHIYEEICSQLRLVIIENMVRVENDEGEIVREFVKESDTIQLYKSEREVLVYLTHLVIDTEEIMISKL--ARQIDGSEWSWHNINTLSWAIGSISG-----TMSEDTEKRFVVTVIKDLLDL---TVKKRGKDNKAVVASDIMYVVGQY------------PRF--------LKAHWNFLTVILKLFEFMHETHEGVQDMACDTKIVQKCKYHFVIQQPRES-------EPF-----IQTIIRDIQKTTADLQPQQVHT
9PROSPECT23a0oA0.0900.8641.925threading_9QLSAFADAVAKDPNHCGWAEFYQMYIDCQEVIYAIRHLAIAGRVLGRDASRKWLLAVAAWDTKG-------ATSRAYNDEAGFRVVVALAWGYDWLYDHLSEDERRTVRSVLLERTREVADHVIAHARIHVFPYD--------------------------SHAVRSLSAVLTPACIALQGESDEA----GEWLDYTVEFLATLYSPW-------AGTDGGWAEGPHYWMTGMAYLIEAANLIRSYIGYD------LYQRPFFQNTGRFPLYTKAPGTRRANFGDDSTLGDLPGLKLGYNVRQFAGVTGNGHYQWYFDHIKADATGTEMAFYNYGWWDLNFDDLVYRHDYPQVEAVSPADLPALAVFDDIGWAKDMEDPDRHLQFVFKSSPYGSLYYVAFNSQMHLNWRRQTRSDKALARRAAGRIVSVEEQPGHVRIVGDAEVECSEPQELQLGAPQTGRSSFRYNGRKAGFYGQF----VYSSGGTPQISPKEFEGLDIHHHVCATIDDQGFSTDIYFSDVD---------------------DERFKPK
10PPA-I3l1lA0.1200.6500.961threading_10GLSMVYAKMSFLDPGPFLGYQTNVLYWLACWIGNIAMVVIGVGYLSY-----------------------FFPILKDPWVLTITCVVVLWIFVLLNIVG--PKMITRVQAVATVLALIPIVGIAVFGWFWFRGETYMA---------------------AIQSTLNVTLWSFESASVAAGVVKN-PKRNVPIATIGGVLIAAVCYVLSTTAIMGMIPNA-----ALRVSASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPI--FARVNKAGTPVAGLIIVGILMTIFQLS-------------SISPNATKEFGLVSSVSVIFTLVPYLYTCAALLLLGHGHFGKA-----RPAYLAVTTIAFLYCIWAVVGSGAKEVMWSFVTLMVITAMYALNYNRLHKNPYPLDA-------------------------------------------------------------------------------------------------------------------------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.735 to 1kpkA
SCOP code=f.20.1.1
TM-score=0.559 to 1xm9A
SCOP code=a.118.1.24
TM-score=0.537 to 1ialA
SCOP code=a.118.1.1
TM-score=0.508 to 2q6hA
SCOP code=f.54.1.1
TM-score=0.727 to 1b3uA
SCOP code=a.118.1.2