Template-based Modeling Results for NUDK_ECOLI


  Submitted Primary Sequence

>Length 191
MTQQITLIKDKILSDNYFTLHNITYDLTRKDGEVIRHKREVYDRGNGATILLYNTKKKTVVLIRQFRVATWVNGNESGQLIESCAGLLDNDEPEVCIRKEAIEETGYEVGEVRKLFELYMSPGGVTELIHFFIAEYSDNQRANAGGGVEDEDIEVLELPFSQALEMIKTGEIRDGKTVLLLNYLQTSHLMD
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MTQQITLIKDKILSDNYFTLHNITYDLTRKDGEVIRHKREVYDRGNGATILLYNTKKKTVVLIRQFRVATWVNGNESGQLIESCAGLLDNDEPEVCIRKEAIEETGYEVGEVRKLFELYMSPGGVTELIHFFIAEYSDNQRANAGGGVEDEDIEVLELPFSQALEMIKTGEIRDGKTVLLLNYLQTSHLMD
CCCCEEEEEEEEEECCCEEEEEEEEEEECCCCCEEEEEEEEEEECCEEEEEEEECCCCEEEEEEEEEEEEEECCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MTQQITLIKDKILSDNYFTLHNITYDLTRKDGEVIRHKREVYDRGNGATILLYNTKKKTVVLIRQFRVATWVNGNESGQLIESCAGLLDNDEPEVCIRKEAIEETGYEVGEVRKLFELYMSPGGVTELIHFFIAEYSDNQRANAGGGVEDEDIEVLELPFSQALEMIKTGEIRDGKTVLLLNYLQTSHLMD
55422202212002331020210101021441311312110021020000000114431000021010001122332110020111123332122001120032122311202200100102101210000000211333323222223322010010102201300331303101000000001023124
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMTQQITLIKDKILSDNYFTLHNITYDLTRKDGEVIRHKREVYDRGNGATILLYNTKKKTVVLIRQFRVATWVNGNESGQLIESCAGLLDNDEPEVCIRKEAIEETGYEVGEVRKLFELYMSPGGVTELIHFFIAEYSDNQRANAGGGVEDEDIEVLELPFSQALEMIKTGEIRDGKTVLLLNYLQTSHLMD
1MUSTER1viuB0.9780.9323.823threading_1--QQITLIKDKILSDNYFTLHNITYDLTRKDGEVIRHKREVYDRGNGATILLYNTKKKTVVLIRQFRVATWVNGNESGQLIESCAGLLDNDEPEVCIRKEAIEETGYEVGEVRKLFELY-SPGGVTELIHFFIAEYSDN--------QRAEDIEVLELPFSQALEI-KTGEIRDGKTVLLLNYLQTSHL-D
2SPARKS1viua0.9600.9274.474threading_2--QQITLIKDKILSDNYFTLHNITYDLTRKDGEVIRHKREVYDRGNGATILLYNTKKKTVVLIRQFRVATWVNGNESGQLIESCAGLLDNDEPEVCIRKEAIEETGYEVGEVRKLFELY-SPGGVTELIHFFIAEY---------SDNQREDIEVLELPFSQAL-EIKTGEIRDGKTVLLLNYLQTSHLD-
3PROSPECT22yvmA0.2580.9323.334threading_3MSPW-ERILLEEILSEPVRLVKE--RVRTHTGR--ELTYVYRPGPVAASFVLPVTERGTALLVRQYRHPT------GKFLLEVPAGKVDGETPEAAARRELREEVGAEAETLIPLPSFHPQPSFTAVVFHPFLALKAR--VVTPPTLEEGELLESLELPLTEVYALLAKGEIQDASTALTLFYAEPHLGLL
4PPA-I1viuB0.9720.9324.653threading_4--QQITLIKDKILSDNYFTLHNITYDLTRKDGEVIRHKREVYDRGNGATILLYNTKKKTVVLIRQFRVATWVNGNESGQLIESCAGLLDNDEPEVCIRKEAIEETGYEVGEVRKLFELY-SPGGVTELIHFFIAEYSDN--------QRAEDIEVLELPFSQALEI-KTGEIRDGKTVLLLNYLQTSHLD-
5HHPRED-l1g0s_A0.2750.9534.431threading_5GKNDVEIIARETLYRGFFSLDLYRFRHRLFNGQMSEVRREIFERGHAAVLLPFDPVRDEVVLIEQIRIAAYDTSE-TPWLLEMVAGMIEEESVEDVARREAIEEAGLIVKRTKPVLSFLASPGGTSERSSIMVGEVDATTAS-------NEDIRVHVVSREQAYQWVEEGKIDNAASVIALQWLQLHHQA-
6HHPRED-g1g0s_A0.2730.9584.954threading_6GKNDVEIIARETLYRGFFSLDLYRFRHRLFNGQMSEVRREIFERGHAAVLLPFDPVRDEVVLIEQIRIAAYDTSE-TPWLLEMVAGMIEGESVEDVARREAIEEAGLIVKRTKPVLSFLASPGGTSERSSIMVGEVDATTAS-------NEDIRVHVVSREQAYQWVEEGKIDNAASVIALQWLQLHHQAL
7SP31viua0.9660.9274.505threading_7--QQITLIKDKILSDNYFTLHNITYDLTRKDGEVIRHKREVYDRGNGATILLYNTKKKTVVLIRQFRVATWVNGNESGQLIESCAGLLDNDEPEVCIRKEAIEETGYEVGEVRKLFELY-SPGGVTELIHFFIAEY---------SDNQREDIEVLELPFSQAL-EIKTGEIRDGKTVLLLNYLQTSHL-D
8SAM-T991viqA0.2730.9794.460threading_8GKNDVEIIARETLYRGFSSLDLYRFRHRLFNGQMHEVRREIFERGHAAVLLPFDPVRDEVVLIEQIRIAAYD-TSETPWLLEMVAGMIEEGEVEDVARREAIEEAGLIVKRTKPVLSFLASPGGTSERSSIMVGEVDATTASGI---HGNEDIRVHVVSREQAYQWVEEGKIDNAASVIALQWLQLHHQAL
9MUSTER1viqA0.2740.9743.408threading_9GKNDVEIIARETLYRGFSSLDLYRFRHRLFNGQMSEVRREIFERGHAAVLLPFDPVRDEVVLIEQIRIAAYDTS-ETPWLLEMVAGMIEGESVEDVARREAIEEAGLIVKRTKPVLSFLASPGGTSERSSIMVGEVDATTAS---GIHGNEDIRVHVVSREQAYQWVEEGKIDNAASVIALQWLQLHH-QA
10SPARKS1g0sa0.2840.9584.361threading_10GKNDVEIIARETLYRGFFSLDLYRFRHRLFNGQMSEVRREIFERGHAAVLLPFDPVRDEVVLIEQIRIAAY-DTSETPWLLEMVAGMIEGESVEDVARREAIEEAGLIVKRTKPVLSFLASPGGTSERSSIMVGEVDATT-------ASNEDIRVHVVSREQAYQWVEEGKIDNAASVIALQWLQLHHLKN

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.877 to 1viuB
TM-score=0.878 to native
SCOP code=d.113.1.1
TM-score=0.885 to 1viuB
TM-score=0.884 to native
SCOP code=d.113.1.1
TM-score=0.819 to 1viuB
TM-score=0.819 to native
SCOP code=d.113.1.1
TM-score=0.770 to 1viuB
TM-score=0.790 to native
SCOP code=d.113.1.1
TM-score=0.889 to 1viuB
TM-score=0.885 to native
SCOP code=d.113.1.1

  Experimental Structure

Download 3o61D
SCOP code=d.113.1.1