Template-based Modeling Results for PBL_ECOLI

Submitted Primary Sequence

>Length 158
MRSPKVKFLTIFTFCIFITKMSFASNSCSNEAGTMFRIEPNLIKAIALVESNLKKDSIGKNRDKNNNIKSLDYWLMQINQMHIPLLKKRGIIKDERDLLDNPCLNIKIGTEILYNHFSRCGVTWQCLGTYNAGFAMDNQKKRQQYAPKYILYIPGLMN
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MRSPKVKFLTIFTFCIFITKMSFASNSCSNEAGTMFRIEPNLIKAIALVESNLKKDSIGKNRDKNNNIKSLDYWLMQINQMHIPLLKKRGIIKDERDLLDNPCLNIKIGTEILYNHFSRCGVTWQCLGTYNAGFAMDNQKKRQQYAPKYILYIPGLMN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MRSPKVKFLTIFTFCIFITKMSFASNSCSNEAGTMFRIEPNLIKAIALVESNLKKDSIGKNRDKNNNIKSLDYWLMQINQMHIPLLKKRGIIKDERDLLDNPCLNIKIGTEILYNHFSRCGVTWQCLGTYNAGFAMDNQKKRQQYAPKYILYIPGLMN
44221110000000000001000002000120032140112001000112031323110323332131311110111013100210342212333231021001002000100110023010001000010012223123212200110121022125
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MRSPKVKFLTIFTFCIFITKMSFASNSCSNEAGTMFRIEPNLIKAIALVESNLKKDSIGKNRDKNNNIKSLDYWLMQINQMHIPLLKKRGIIKDERDLLDNPCLNIKIGTEILYNHFSRCGVTWQCLGTYNAGFAMDNQKKRQQYAPKYILYIPGLMN
1	MUSTER	1slyA	0.181	0.943	1.526	threading_1	NQWWDLSVQATIAGKLLEERFPLAYNDLFKRYTSGKEIPQSYAMAIARQESAWNPKVKSPVG---------ASGLMQIMPGTATHTVKMFPGYSSPGQLLDPETNINIGTSYLQYVYQQFNNRIFSSAAYNAGLGRVRFSETRGYVKNVLAYDAYYRY
2	SPARKS	1qsaa2	0.228	0.804	3.675	threading_2	----------------------LAYNDLFKRYTSGKEIPQSYAMAIARQESAWNPKVKSP---------VGASGLMQIMPGTATHTVKFSIPGSSPGQLLDPETNINIGTSYLQYVYQQFGNRIFSSAAYNAGPGRVRFSETRGYVKNVLAYDAYYRY
3	PROSPECT2	1qsaa2	0.220	0.804	1.628	threading_3	L----------------------AYNDLFKRYTSGKEIPQSYAMAIARQESAWNPKVKSPVG---------ASGLMQIMPGTATHTVKMIPGYSSPGQLLDPETNINIGTSYLQYVYQQFGNRIFSSAAYNAGPGRVRTWLGNGYVKNVLAYDAYYRY
4	PPA-I	1slyA4	0.242	0.576	1.882	threading_4	----------------------LAYNDLFKRYTSGKEIPQSYAMAIARQESAWNPKVKSP---------VGASGLMQIMPGTATHTVKMFPGYSSPGQLLDPETNINIGTSYLQYVYQQFGN------------------------------------
5	HHPRED-l	1qsa_A	0.209	0.937	4.861	threading_5	SKSKTEWDLSVQATIALEERFPLAYNDLFKRYTSGKEIPQSYAMAIARQESAWNPKVKSPVGA---------SGLMQIMPGTATHTVKMSIPYSSPGQLLDPETNINIGTSYLQYVYQQFNNRIFSSAAYNAGPGRVRTWETRGYVKNVLAYDAYFM-
6	HHPRED-g	1qsa_A	0.181	0.943	5.341	threading_6	NQWWDLSVQATIAWDHLEERFPLAYNDLFKRYTSGKEIPQSYAMAIARQESAWNPKVKSP---------VGASGLMQIMPGTATHTVMFSIPGSSPGQLLDPETNINIGTSYLQYVYQQFNNRIFSSAAYNAGPGRVRTWETRGYVKNVLAYDAYYRY
7	SP3	2y8pa	0.193	0.918	3.566	threading_7	----KHDYTNPPWNAKVPVQRAMQWMPISQKAGAAWGVDPQLITAIIAIESGGNPNAVSK---------SNAIGLMQLKASTSGRDVYRRMGEPTTSELKNPERNISMGAAYLNILETGPLAQYALVVSYANGAGALLAPQAPRYIYKLEQALDAMLE
8	SAM-T99	1slyA	0.192	0.924	2.812	threading_8	WDLSVQATIAGKLWDHLEERFPLAYNDLFKRYTSGKEIPQSYAMAIARQESAWNPKVKS---------PVGASGLMQIMPGTAKMFSIPGYSSP--GQLLDPETNINIGTSYLQYVYQQFGNNRISSAAYNAGLGRIPFSETRGYVKNVLAYDAYYR-
9	MUSTER	3mgwA	0.162	0.899	1.310	threading_9	DKLTLQGVDASHKLAEHDLVRMNKYKELITRVGQKHGLDPAIIAGIISRESRAGSALDHGWGDHGK-----GFGLMQVDKRYHKIV---GA--------WDSEKHISQGTEILIEFIRRIQALKGGISAYNAGDKNVRTYTGGDYSNDVVARSQWFKS
10	SPARKS	2y8pa	0.197	0.867	3.482	threading_10	WN------------AKVPVQRAMQWMPISQKAGAAWGVDPQLITAIIAIESGGNPNAVSK---------SNAIGLMQLKASTSGRDVYRRMGEPTTSELKNPERNISMGAAYLNILETGPLAQYALVVSYANGAGALLAPQAPRYIYKLEQALDAMLE

Predicted Tertiary Structure


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TM-score=0.739 to 1slyA SCOP code=a.118.5.1	TM-score=0.677 to 1slyA SCOP code=a.118.5.1	TM-score=0.756 to 1slyA SCOP code=a.118.5.1	TM-score=0.751 to 1slyA SCOP code=a.118.5.1	TM-score=0.758 to 1slyA SCOP code=a.118.5.1