Template-based Modeling Results for PINQ_ECOLI


  Submitted Primary Sequence

>Length 196
MSQIFAYCRISTLDQTTENQRREIESAGFKIKPQQIIEEHISGSAATSERPGFNRLLARLKCGDQLIVTKLDRLGCNAMDIRKTVEQLTETGIRVHCLALGGIDLTSPTGKMMMQVISAVAEFERDLLLERTHSGIVRARGAGKRFGRPPVLNEEQKQAVFERIKSGVSISAIAREFKTSRQTILRAKAKLQTPDI
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSQIFAYCRISTLDQTTENQRREIESAGFKIKPQQIIEEHISGSAATSERPGFNRLLARLKCGDQLIVTKLDRLGCNAMDIRKTVEQLTETGIRVHCLALGGIDLTSPTGKMMMQVISAVAEFERDLLLERTHSGIVRARGAGKRFGRPPVLNEEQKQAVFERIKSGVSISAIAREFKTSRQTILRAKAKLQTPDI
CCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MSQIFAYCRISTLDQTTENQRREIESAGFKIKPQQIIEEHISGSAATSERPGFNRLLARLKCGDQLIVTKLDRLGCNAMDIRKTVEQLTETGIRVHCLALGGIDLTSPTGKMMMQVISAVAEFERDLLLERTHSGIVRARGAGKRFGRPPVLNEEQKQAVFERIKSGVSISAIAREFKTSRQTILRAKAKLQTPDI
5311000000042322231012102311031322100212112322223120022003303311100001012110202101300220252202010022211112120020002000000211231012113210210231333212332233311210121142311021004204011200120124234344
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMSQIFAYCRISTLDQTTENQRREIESAGFKIKPQQIIEEHISGSAATSERPGFNRLLARLKCGDQLIVTKLDRLGCNAMDIRKTVEQLTETGIRVHCLALGGIDLTSPTGKMMMQVISAVAEFERDLLLERTHSGIVRARGAGKRFGRPPVLNEEQKQAVFERIKSGVSISAIAREFKTSRQTILRAKAKLQTPDI
1MUSTER1gdtA0.3220.9343.676threading_1M-RLFGYARVSTSQQSLDIQVRALKDAGV--KANRIFTDKASGSS--SDRKGLDLLRMKVEEGDVILVKKLDRLGRDTADMIQLIKEFDAQGVSIRFIDDG-ISTDGEMGKMVVTILSAVAQAERQRILERTNEGRQEAMAKGVVFGRKRKID---RDAVLNMWQQGLGASHISKTMNIARSTVYKVINESN----
2SPARKS1gdta0.3170.9343.778threading_2-MRLFGYARVSTSQQSLDIQVRALKDAGV--KANRIFTDKASGSS--SDRKGLDLLRMKVEEGDVILVKKLDRLGRDTADMIQLIKEFDAQGVSIRFIDDG-ISTDGEMGKMVVTILSAVAQAERQRILERTNEGRQEAMAKGVVFGRKRKID---RDAVLNMWQQGLGASHISKTMNIARSTVYKVINESN----
3PROSPECT22r0qC0.3200.9083.287threading_3M--IIGYARVSSLDQNLERQLENLKTFGA----EKIFTEK--------NRPILQKALNFVRMGDRFIVESIDRLGRNYNEVIHTVNYLKDKEVQLMITSLGNPLLDKFMKDLIIQILAMVSEQERNESKRRQAQGIQVAKEKGVYKGRPLLYSRVIYHRVVEMLEEGQAISKIAKEVNITRQTVYRIK----HDNG
4PPA-I1gdtA0.3170.9346.166threading_4-MRLFGYARVSTSQQSLDIQVRALKDAGV--KANRIFTDKASGSS--SDRKGLDLLRMKVEEGDVILVKKLDRLGRDTADMIQLIKEFDAQGVSIRFIDDG-ISTDGEMGKMVVTILSAVAQAERQRILERTNEGRQEAMAKGVVFGRKRKID---RDAVLNMWQQGLGASHISKTMNIARSTVYKVINESN----
5HHPRED-l1gdt_A0.3220.9344.120threading_5MR-LFGYARVSTSQQSLDIQVRALKDAGVK--ANRIFTDKASGS--SSDRKGLDLLRMKVEEGDVILVKKLDRLGRDTADMIQLIKEFDAQGVSIRFIDDG-ISTDGEMGKMVVTILSAVAQAERQRILERTNEGRQEAMAKGVVFGRKRKIDRD---AVLNMWQQGLGASHISKTMNIARSTVYKVINESN----
6HHPRED-g1gdt_A0.3130.9293.842threading_6--MRFGYARVSTSQQSLDIQVRALKDAGVKA--NRIFTDKASGS--SSDRKGLDLLRMKVEEGDVILVKKLDRLGRDTADMIQLIKEFDAQGVSIRFIDD-GISTDGEMGKMVVTILSAVAQAERQRILERTNEGRQEAMAKGVVFGRKRKIDRDA---VLNMWQQGLGASHISKTMNIARSTVYKVINESN----
7SP31gdta0.3220.9343.978threading_7M-RLFGYARVSTSQQSLDIQVRALKDAGVKA--NRIFTDKASGS--SSDRKGLDLLRMKVEEGDVILVKKLDRLGRDTADMIQLIKEFDAQGVSIRFIDDG-ISTDGEMGKMVVTILSAVAQAERQRILERTNEGRQEAMAKGVVFGRKRKID---RDAVLNMWQQGLGASHISKTMNIARSTVYKVINESN----
8SAM-T991gdtA0.3150.9234.778threading_8-MRLFGYARVSTSQQSLDIQVRALKDAGV--KANRIFTDKASGSSS--DRKGLDLLRMKVEEGDVILVKKLDRLGRDTADMIQLIKEFDAQGVSIRFIDDG-ISTDGEMGKMVVTILSAVAQAERQRILERTNEGRQEAMAKGVVFGRKRKID---RDAVLNMWQQGLGASHISKTMNIARSTVYKVINE------
9MUSTER2r0qC0.3090.9083.117threading_9--MIIGYARVSSLDQNLERQLENLKTFGA----EKIFTEK--------NRPILQKALNFVRMGDRFIVESIDRLGRNYNEVIHTVNYLKDKEVQLMITSLPMMNLDKFMKDLIIQILAMVSEQERNESKRRQAQGIQVAKEKGVYKGRPLLYSRVIYHRVVEMLEEGQAISKIAKEVNITRQTVYRIKHDNG----
10SPARKS2r0qc0.2980.9083.410threading_10--MIIGYARVSSLDQNLERQLENLKTFGAE----KIFT--------EKNRPILQKALNFVRMGDRFIVESIDRLGRNYNEVIHTVNYLKDKEVQLMITSLPMMNEVKFMKDLIIQILAMVSEQERNESKRRQAQGIQVAKEKGVYKGRPLLYSRVIYHRVVEMLEEGQAISKIAKEVNITRQTVYRIKHDNG----

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.776 to 1gdtA
SCOP code=a.4.1.2
TM-score=0.784 to 1gdtA
SCOP code=a.4.1.2
TM-score=0.770 to 1gdtA
SCOP code=a.4.1.2
TM-score=0.679 to 1gdtA
SCOP code=a.4.1.2
TM-score=0.770 to 1gdtA
SCOP code=a.4.1.2