Template-based Modeling Results for PURE_ECOLI


  Submitted Primary Sequence

>Length 169
MSSRNNPARVAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSAHRTPDKLFSFAESAEENGYQVIIAGAGGAAHLPGMIAAKTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILATHDKELHQRLNDWRKAQTDEVLENPDPRGAA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSSRNNPARVAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSAHRTPDKLFSFAESAEENGYQVIIAGAGGAAHLPGMIAAKTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILATHDKELHQRLNDWRKAQTDEVLENPDPRGAA
CCCCCCCCEEEEEECCHHCHHHHHHHHHHHHHCCCCEEEEEEEHHCCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MSSRNNPARVAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSAHRTPDKLFSFAESAEENGYQVIIAGAGGAAHLPGMIAAKTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILATHDKELHQRLNDWRKAQTDEVLENPDPRGAA
5544433120000000301120022002002204020101000012002101100220353201000000102010000000202100000103122120020000012003100000000021101000000000011213302210221132102203433334234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMSSRNNPARVAIVMGSKSDWATMQFAAEIFEILNVPHHVEVVSAHRTPDKLFSFAESAEENGYQVIIAGAGGAAHLPGMIAAKTLVPVLGVPVQSAALSGVDSLYSIVQMPRGIPVGTLAIGKAGAANAALLAAQILATHDKELHQRLNDWRKAQTDEVLENPDPRGAA
1MUSTER3orsA0.4780.9533.747threading_1------AMKVAVIMGSSSDWKIMQESCNMLDYFEIPYEKQVVSAHRTPKMMVQFASEARERGINIIIAGAGGAAHLPGMVASLTTLPVIGVPIETKSLKGIDSLLSIVQMPGGIPVATTAIGAAGAKNAGILAARMLSIQNPSLVEKLNQYESSLIQKVEDMQNELQ--
2SPARKS3rg8a0.2660.9114.718threading_2------RPLVIILMGSSSDMGHAEKIASELKTFGIEYAIRIGSAHKTAEHVVSMLKEYEALDPKLYITIAGRSNALSGFVDGFVKGATIACPPPSDSFAGADI-YSSLRMPSGISPALV----LEPKNAALLAARIFSLYDKEIADSVKSYMESNAQKIIEDDSK----
3PROSPECT23orsA0.4780.9533.683threading_3------AMKVAVIMGSSSDWKIMQESCNMLDYFEIPYEKQVVSAHRTPKMMVQFASEARERGINIIIAGAGGAAHLPGMVASLTTLPVIGVPIETKSLKGIDSLLSIVQMPGGIPVATTAIGAAGAKNAGILAARMLSIQNPSLVEKLNQYESSLIQKVEDMQNELQ--
4PPA-I3orsA0.4780.9533.872threading_4------AMKVAVIMGSSSDWKIMQESCNMLDYFEIPYEKQVVSAHRTPKMMVQFASEARERGINIIIAGAGGAAHLPGMVASLTTLPVIGVPIETKSLKGIDSLLSIVQMPGGIPVATTAIGAAGAKNAGILAARMLSIQNPSLVEKLNQYESSLIQKVEDMQNELQ--
5HHPRED-l1u11_A0.5970.9414.363threading_5-----SAPVVGIIMGSQSDWETMRHADALLTELEIPHETLIVSAHRTPDRLADYARTAAERGLNVIIAGAGGAAHLPGMCAAWTRLPVLGVPVESRALKGMDSLLSIVQMPGGVPVGTLAIGASGAKNAALLAASILALYNPALAARLETWRALQTASVPNSPI-----
6HHPRED-g1u11_A0.5970.9413.875threading_6-----SAPVVGIIMGSQSDWETMRHADALLTELEIPHETLIVSAHRTPDRLADYARTAAERGLNVIIAGAGGAAHLPGMCAAWTRLPVLGVPVESRALKGMDSLLSIVQMPGGVPVGTLAIGASGAKNAALLAASILALYNPALAARLETWRALQTASVPNSPI-----
7SP33rg8a0.2600.9115.024threading_7------RPLVIILMGSSSDMGHAEKIASELKTFGIEYAIRIGSAHKTAEHVVSMLKEYEALRPKLYITIAGRSNALSGFVDGFVKGATIACPPPSDSFAG-ADIYSSLRMPSGISPALV----LEPKNAALLAARIFSLYDKEIADSVKSYMESNAQKIIEDDSK----
8SAM-T991o4vA0.5090.9414.991threading_8-------PRVGIIMGSDSDLPVMKQAAEILEEFGIDYEITIVSAHRTPDRMFEYAKNAEERGIEVIIAGAGGAAHLPGMVASITHLPVIGVPVKTSTLNGLDSLFSIVQMPGGVPVATVAIN--NAKNAGILAASILGIKYPEIARKVKEYKERMKREVLEKAQRLEQ-
9MUSTER3lp6A0.4880.9593.601threading_9-----ERPRVGVIMGSDSDWPVMADAAAALAEFDIPAEVRVVSAHRTPEAMFSYARGAAARGLEVIIAGAGGAAHLPGMVAAATPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSIG--GAGNAGLLAVRMLGAANPQLRARIVAFQDRLADVVAAKDAELQRL
10SPARKS1qcza0.9370.9354.379threading_10-------PARVAIVGSKSDWA-TQFAAEIFEILNVPHHVEVVSAHRTPDKLFSFAESAEENGYQVIIAGAGGAAHLPGIAA-KTLVPVLGVPVQSAALSGVDSLYSIVQ-PRGIPVGTLAIGKAGAANAALLAAQILATHDKELHQRLNDWRKAQTDEVLENPDPRGA-

  Predicted Tertiary Structure

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TM-score=0.916 to 1o4vA
TM-score=0.942 to native
SCOP code=c.23.8.1
TM-score=0.916 to 1o4vA
TM-score=0.942 to native
SCOP code=c.23.8.1
TM-score=0.853 to 1xmpC
TM-score=0.844 to native
SCOP code=c.23.8.1
TM-score=0.916 to 1o4vA
TM-score=0.942 to native
SCOP code=c.23.8.1
TM-score=0.916 to 1o4vA
TM-score=0.942 to native
SCOP code=c.23.8.1

  Experimental Structure

Download 2nshA
SCOP code=c.23.8.1