Template-based Modeling Results for RMUC_ECOLI

Submitted Primary Sequence

>Length 475
MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDEAYQRDDEYNQQSR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDEAYQRDDEYNQQSR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCEECCEEEEECCCCCCCEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCEEEEEECCHHHHHHHHHCCHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDEAYQRDDEYNQQSR
4412101100000001000201211221223131222222122212102321221221221022023113212211221221133112213212320222132012113301320221033112201331232033102211220332032033203311131132222022103302311120121022002103123321021000001200321112421211111102343322110100020142430001030012002201423233112200320110023103300522132022230020000000010001100311230022014210000001000000200010022211121022003201300320210121022003102301320330043012012201210210331223244313331132122333324232233333332334333233324
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MDFSIMVYAVIALVGVAIGWLFASYQHAQQKAEQLAEREEMVAELSAAKQQITQSEHWRAECELLNNEVRSLQSINTSLEADLREVTTRMEAAQQHADDKIRQMINSEQRLSEQFENLANRIFEHSNRRVDEQNRQSLNSLLSPLREQLDGFRRQVQDSFGKEAQERHTLTHEIRNLQQLNAQMAQEAINLTRALKGDNKTQGNWGEVVLTRVLEASGLREGYEYETQVSIENDARSRMQPDVIVRLPQGKDVVIDAKMTLVAYERYFNAEDDYTRESALQEHIASVRNHIRLLGRKDYQQLPGLRTLDYVLMFIPVEPAFLLALDRQPELITEALKNNIMLVSPTTLLVALRTIANLWRYEHQSRNAQQIADRASKLYDKMRLFIDDMSAIGQSLDKAQDNYRQAMKKLSSGRGNVLAQAEAFRGLGVEIKREINPDLAEQAVSQDEEYRLRSVPEQPNDEAYQRDDEYNQQSR
1	MUSTER	2ooeA	0.090	0.962	1.027	threading_1	YDLDAWSILIREAQNQ---PIDKARKTYERLVAQFPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLH-IDLWKCYLSYVRETKGKLPSYKEKMAQAYDFALDKIGMMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVINIEQLWRDYNKYEEGIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVQEAQQVDMWKKYI-----QWEKSNPLRTEDQTLITKRVMFAY--EQCLLVLGHHPWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLK----KNMLLYF--AYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEG-IKSGRMIFKKAREDHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDTSGSLPPEVEKRRFEYEGKETALLVDRYKFMDLYPCSASELKAGY
2	PROSPECT2	1w63A	0.095	0.994	2.007	threading_2	MPAPIRLRELIRTIRTARTQAEEREMIQKECAAIRSSFRENTYRCRNVAKLLYMHMLGYPAHFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATHGVLHTSVVLLTEMCERSPDMLAHFRKLVPQLVRILKNLIMSGYSPEPFLQVRILRLLRILGRNDDDSSEAQVATNTETSKNVGNAILYDIKSESGLRVLA---INILGRFLLNNDKNIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGNNIRGMMKELLYFLDSCEPEFKADCASGIFLAAEKPSKRWHIDTIMRVLTTAGSYVPNLIQLITNSVEMHAYTVQRLYKAILGVQVAAWCIGEYGDLLVSGQCEEEEPIQVTEDEVLDILESVLISNMSTSTRFTCTVNRIKKVVSIEK
3	PPA-I	3edvA	0.124	0.661	1.022	threading_3	---------------------SHMRHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQERVDTVNHLADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILAASYELHKFYHDAKEIFGRIQDKHKKLQNTVETLQRMHTTFEHDIQALGTQVRQLQEDAARLQAAYAGDKA---DDIQKRENEVLEA--------------------------------------------WKSLLDACESRVRLVDTGDKFRFFSMVRDLMLWMEDVIRQIEAQEKPRD--------VSSVELLMNNHQGIKAEIDAR------NDSFTTCIELGKSLLARKH--YASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRL-----------------------------------------------------------------------------
4	HHPRED-g	2dfs_A	0.128	0.594	1.284	threading_4	AGQVAYLEKRADKLRAACIRI---QKTIRGWLM-----RKKYMRMRRAAITIQ--RYVRGHQARCYATFLRRTRAAIIIQKFQRMVRKRYQCMRDATIALQALLRGVRNKYQMMLREHKSIIIQKHVRGW----------------------LARVH--Y------H-------------------------RTLKAIVYLQCCYRRMMAKRELKK--L---------------------------------------M--NNLE------------ITYSTETEKLRSDVERLRMSEE-EAKN------------ATNR-VLSLQE--EI--AKLRK---------ELHQTQTEKKTI-EEWADKYKHETEQLVSELKEQNTLLKTEKEELNRRIHDQAKEITETMEK------KLVEETKQLEL-------DLN---DERLRYQ-----------------------------
5	PROSPECT2	1b3ua	0.096	0.983	2.004	threading_5	AAIAVLIVQLRLNSIKKLSTIALALGVERTRSELLPFLTDTDEVLLALAEQLGTFTTLVGGPEYVHCLLPPLESLETVVRDKAVESLRAISDLEAHFVPLVKRLAGGDWFTSRTSACGLFSVCSAVKAELRQYFRNLCPMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNEACVNIAQLQEDLEALVMPTLRQAAEDKSWRVRYMVADFTELQKAVGPEITKTDLVPAFQNLMKDCEAEVRAAANLSADCRENVIMSQILPCIKELVSDANQHVKSALADNTIEHLLPLFLAQLKDECPEVRLNSNLDCVNEVIGIRQLSQSLLP----AIVELAEDA----KWRVRLAIIEYMPLLAGQLGVEFFDEKLNSLCMAWYAIREAATSNLKKLVEKFGKEWAHATFCINVLSEVCGQDITTLPTVLRMAGDPVANVRFNVAKSGPILDNSTLQSEVKPILEKLTQDQDVDVKYFLA
6	HHPRED-g	2dfs_A	0.124	0.509	1.075	threading_6	LEACIRIQ---KTIR---GWLMRK-KYMRMRRAAITIQRYVRGHQARCYRAAIIIQKFQ-RMYVVRKRYQCMRDATIALQALLRGYLVRNKYQM-MLREHKSIIIQKHVRGWVHYHRTLKAIVYQCCKKL-------------------------------------------MNNLEI---TYSTETEKLRSD------------------------------------------------------------------VERLRMSEEAKNATNRIAKLRKELHQTQTEKKTIEEW-------------------------------ADKYKHETE---------QLVSELKEQNTLLKTEKEELNR-RIHDQAKEITETMEKKLEETKQLELDLNDERLRYQ-----------------------------------------------------------------------
7	PROSPECT2	3ripA	0.099	0.874	1.998	threading_7	M-IHELLLALETSVLNRLCRLGTDYIRFTEFIEQDSVLQPYRQALLDLEQEFLGISHVNYFLDQFQLLFPSVMVVVEQIKSQLETVYKHSCGGLPPVRSALEKILAVCHGVMYKQVRVAEKILFVGESVQEDTFAAELHRLLVDFEQVVDRIRSTVAEHLWKLMVEESDLLGQLKIIKDFRGELFQAFIDTAQHMLKTPPTAVTEHDVNFQQSAHKVLLDDDNLLPLLHLTIEYHGASGWAALGLS--------YKVQWPLHI------LFTPAVLEKYNVVFKYLLSRRVQAELQHCWALQMQRKHLKSNQTDAIKWRLRNHMAFLVDNLQYYLQV--------DVLESQFSQLLHQINRLAHDHFLSNLLAQSFILLKPVFHCLNEILDLCHSFERGAAQLSILVKGFSRQSSLLFKILSSVRN-------------------------------------HQINSDLAQKYY
8	PROSPECT2	1jdha	0.088	0.981	1.979	threading_8	IRAIPELTKLLQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMDSVLFYAITTLHNLLLHQEGAKMAVRL--AGGLQKMVALLNKTNVKFLAITTDCLQILAYGNQE-----SKLIILASGGPQALVNIMRTYTEKLLWTTSRVLKVLSVCSSNKPAIVEAGGMQALGLHLTDPSQRLVQNCAATKQEGMEGLLGTLVQLLGSDDINV-VTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGDREDITEPAICALRHLTSRHQEAEMAQNAVRLHYGLPVVVKLLHPP-SHWPLIKATVGLIRNLALCPANHAPLREAIPRLVQLLVRAHQDTQFMEEIVEGCTGALHILRDVHNRIVIRGLNTIPLFVQLLYSPIENIQRQDKEAAEAIEAEGATAPLTELLHSRNEGVATYAAAVLFRMS
9	PROSPECT2	2ooeA	0.080	0.895	1.947	threading_9	MDLDAWSILIREAQNQPIDKARKTYERLGRFWKLYIEAEIKAKNYDKVEKLFQRIDLWKCYLSYVRETKGKLPSYKEKMAQAYDFALDKIGMMSYQIWVDYINFLKGENQRITAVRRVYQRGCVNPMINIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLEAQQVDMWKKYIQWEKSNPLRTEDQTLRVMFAYEQCLLVLGH----------------------------------------HPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAA-NIYERAISTLLKKNMLLYF----AYADYEESRMSIYNRLLAIE-----DIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPNNTRVLFERVLTSGSLPPEKSGEAFESNIGDYEGKETALLVDRYKFMDLYPCSASELKKDV
10	MUSTER	1b3uA	0.121	0.989	0.912	threading_10	DSLYPIAVLIDELRNEDVQLRLNSIKKLSTIALALGVERTRSELLPFLTDTIYDEDEVLLALAEQLGTFTTLVGGPEYVHCLLPPLESLATVVRDKAVESLRAISHSPSDLEAHFVPLVKRLAGGDWFTSRTSACGLFSVCYPRVSAVKAELRQYFRNLCSDTPMVRRAAASKLGEFAKVLDNVKSEIIPMFSNLASDEQDS-LLAVEACVNIAQLLPQEDLEALPTLRQAAEDKSWRVRYMVADKFTEGPEITKT----VPAFQNLMKDCEAEVRAAASHKVKEFCENLSADCRENVIMSQANQHVKSALASVIMGLPLFLAQLKDCPEVRLNIISNCVNVIGIRQLSQSLLPAIVELAEDAKWRVRLAIIEYMPLLAGQLGVFDEKLNSLCMAWYAIREAATSNLKKLVEKFGKEWAHATIIPKVLAMSGDPNYLHLSEVCGQDITTKHLRMAGDPVANKIGPILDNSTLQSE

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.847 to 2ooeA SCOP code=a.118.8.7	TM-score=0.881 to 2ooeA SCOP code=a.118.8.7	TM-score=0.799 to 1w63C SCOP code=i.23.1.1	TM-score=0.558 to 1cunA SCOP code=a.7.1.1	TM-score=0.432 to 1xi4K SCOP code=i.23.1.1