Template-based Modeling Results for RNFB_ECOLI


  Submitted Primary Sequence

>Length 192
MNAIWIAVAAVSLLGLAFGAILGYASRRFAVEDDPVVEKIDEILPQSQCGQCGYPGCRPYAEAISCNGEKINRCAPGGEAVMLKIAELLNVEPQPLDGEAQEITPARMVAVIDENNCIGCTKCIQACPVDAIVGATRAMHTVMSDLCTGCNLCVDPCPTHCISLQPVAETPDSWKWDLNTIPVRIIPVEHHA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNAIWIAVAAVSLLGLAFGAILGYASRRFAVEDDPVVEKIDEILPQSQCGQCGYPGCRPYAEAISCNGEKINRCAPGGEAVMLKIAELLNVEPQPLDGEAQEITPARMVAVIDENNCIGCTKCIQACPVDAIVGATRAMHTVMSDLCTGCNLCVDPCPTHCISLQPVAETPDSWKWDLNTIPVRIIPVEHHA
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCEEEECCCCCCCCCHHHHHCCHHHEEECCCCCEEECHHHCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MNAIWIAVAAVSLLGLAFGAILGYASRRFAVEDDPVVEKIDEILPQSQCGQCGYPGCRPYAEAISCNGEKINRCAPGGEAVMLKIAELLNVEPQPLDGEAQEITPARMVAVIDENNCIGCTKCIQACPVDAIVGATRAMHTVMSDLCTGCNLCVDPCPTHCISLQPVAETPDSWKWDLNTIPVRIIPVEHHA
443101000000000000000000013202023130022023002302012011100200020012323302300100320012002112132322113122221031000013320210120020012300102341112001210210110022012300101212331322313232022321223445
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMNAIWIAVAAVSLLGLAFGAILGYASRRFAVEDDPVVEKIDEILPQSQCGQCGYPGCRPYAEAISCNGEKINRCAPGGEAVMLKIAELLNVEPQPLDGEAQEITPARMVAVIDENNCIGCTKCIQACPVDAIVGATRAMHTVMSDLCTGCNLCVDPCPTHCISLQPVAETPDSWKWDLNTIPVRIIPVEHHA
1MUSTER1h7wD10.2570.8701.122threading_1VDLVDFTVIQDYCTGLKALLYLKSIEELWD-GQSPGTESHQKGKPVPELMGKKLPNFGPYLEQRKK-----------IIAEEKMRLKEQNAAFPPLERKPFIPKKPIVVAVIDEEMCINCGKCYMTCGYQAIQFDPETHLPTVTDTCTGCTLCLSVCPIDCIRMVSRT---------TPYEPKRGLPL----
2SPARKS1gtea50.2160.7971.977threading_2------------------------ELQGWDGQSPGTESHQKGVPRIAELMGKKLPNFKIIAEEKMRLKEQNERKPFIPKKPIPAIKDVIGKALQYLGTFGELSNIEQVVAVIDEEMCINCGKCYMTCNDQAIQFDPETHLPTVTDTCTGCTLCLSVCPIDCIRMVSRTTPYEPKRGL---------------
3PROSPECT21gtea50.2260.8072.165threading_3ELQ----------------------GWDGQSPGTESHQKGKPVPRIAELMGKKLPNFGPYAEEKMRLKEQNERKPFIPKKPIPAIKDVIGKALQYLGTFGELSNIEQVVAVIDEEMCINCGKCYMTCNDSGIQFDPETHLPTVTDTCTGCTLCLSVCPIDCIRMVSRTTPYEP---------------KRGL
4PPA-I2vkrA0.2000.4951.620threading_4------------------------------------------------------------------------GIDPNYRTSRQVVGEHQGHKVYGPVDPPKVLGIHGTIVGVDFDLCIADGSCITACPVNVFQWYDTPGDPINEQACIFCMACVNVCPVAAIDVKPP-------------------------
5HHPRED-l1gte_A0.2560.9172.643threading_5VTD-IVSIARAAKEGGADGVTATVSGTPWAVGGTPAVTTIARALPGFPIATGGIDSAESGLQFLHSGASVLQVCSAVDFTVIQDYKALLGKALQYLGTFGELSNIEQVVAVIDEEMCINCGKCYMTCGYQAIQFDPETHLPTVTDTCTGCTLCLSVCPIDCIRMVSRTT---------PYEPKRGL------
6HHPRED-g1gte_A0.2880.8852.558threading_6GTAIRIALRAVTTIARALFLHSGASVLAVQNQDFTVIQDLKALLPGTESHGKKLPNFGPYLEQIAEN-------ERKPKKPIPAIKDVIGKALQYLGTFGELSNIEQVVAVIDEEMCINCGKCYMTCGYQAIQFDPETHLPTVTDTCTGCTLCLSVCPIDCIRMVSRTT-PYEPKRGL--------------
7SP31gtea50.2160.7971.743threading_7------------------------ELQGWDGQSPGTESHQKPVPRIAELMGKKLPNFKIIAEEKMRLKEQNERKPFIPKKPIPAIKDVIGKALQYLGTFGELSNIEQVVAVIDEEMCINCGKCYMTCNYQAIQFDPETHLPTVTDTCTGCTLCLSVCPIDCIRMVSRT---TPYEPKRGL------------
8SAM-T991h7wD0.3560.4692.266threading_8---------------------------------------------------------------------------PGTESHQKRIAELMGKKLPNFGPYLEQRKKIIVVAVIDEEMCINCGKCYMTCGYQAIQFDPETHLPTVTDTCTGCTLCLSVCPIDCIRMV---------------------------
9MUSTER1h7wD0.2130.9271.096threading_9SAVQNQDFTVIQDYCTGLKALLYLKSIEWDGQSPGTESH-KPVPRIAELMGKKLPNFKIIAEEKMRAFPPLERKPFIPKKPIPAIKDVIGKALQYLGTFGELSNIEQVVAVIDEEMCINCGKCYMTCGYQAIQFDPETHLPTVTDTCTGCTLCLSVCPIDCIRMVSR---------TTPYEPKRGLPL----
10SPARKS1gtea0.2230.9111.807threading_10VIQDYCTGLKALLYLKSIEELQGWDGQSPGTESHRIAELMGKKLPNF--GPYLEQRKKIIAEEKMRLKEQNERKPFIPKKPIPAIKDVIGKALQYLGTFGELSNIEQVVAVIDEEMCINCGKCYMTCNYQAIQFDPETHLPTVTDTCTGCTLCLSVCPIDCIRMVSRTTPYEPKRGL---------------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.546 to 2fdnA
SCOP code=d.58.1.1
TM-score=0.534 to 1durA
SCOP code=d.58.1.1
TM-score=0.514 to 1durA
SCOP code=d.58.1.1
TM-score=0.504 to 1durA
SCOP code=d.58.1.1
TM-score=0.510 to 1durA
SCOP code=d.58.1.1