Template-based Modeling Results for RPIR_ECOLI


  Submitted Primary Sequence

>Length 296
MSQSEFDSALPNGIGLAPYLRMKQEGMTENESRIVEWLLKPGNLSCAPAIKDVAEALAVSEAMIVKVSKLLGFSGFRNLRSALEDYFSQSEQVLPSELAFDEAPQDVVNKVFNITLRTIMEGQSIVNVDEIHRAARFFYQARQRDLYGAGGSNAICADVQHKFLRIGVRCQAYPDAHIMMMSASLLQEGDVVLVVTHSGRTSDVKAAVELAKKNGAKIICITHSYHSPIAKLADYIICSPAPETPLLGRNASARILQLTLLDAFFVSVAQLNIEQANINMQKTGAIVDFFSPGALK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSQSEFDSALPNGIGLAPYLRMKQEGMTENESRIVEWLLKPGNLSCAPAIKDVAEALAVSEAMIVKVSKLLGFSGFRNLRSALEDYFSQSEQVLPSELAFDEAPQDVVNKVFNITLRTIMEGQSIVNVDEIHRAARFFYQARQRDLYGAGGSNAICADVQHKFLRIGVRCQAYPDAHIMMMSASLLQEGDVVLVVTHSGRTSDVKAAVELAKKNGAKIICITHSYHSPIAKLADYIICSPAPETPLLGRNASARILQLTLLDAFFVSVAQLNIEQANINMQKTGAIVDFFSPGALK
CCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCHHHHHHCCHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MSQSEFDSALPNGIGLAPYLRMKQEGMTENESRIVEWLLKPGNLSCAPAIKDVAEALAVSEAMIVKVSKLLGFSGFRNLRSALEDYFSQSEQVLPSELAFDEAPQDVVNKVFNITLRTIMEGQSIVNVDEIHRAARFFYQARQRDLYGAGGSNAICADVQHKFLRIGVRCQAYPDAHIMMMSASLLQEGDVVLVVTHSGRTSDVKAAVELAKKNGAKIICITHSYHSPIAKLADYIICSPAPETPLLGRNASARILQLTLLDAFFVSVAQLNIEQANINMQKTGAIVDFFSPGALK
55423232223321100210221143013111200200031031003010320042031020000100420303102101100121033233222231224321320022002101310220132022310220030023020000000000100011001101300110000100100010012034100000001113122011002103523020000011230100310100000113223122420101000000000000000211132023103200200221232224
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMSQSEFDSALPNGIGLAPYLRMKQEGMTENESRIVEWLLKPGNLSCAPAIKDVAEALAVSEAMIVKVSKLLGFSGFRNLRSALEDYFSQSEQVLPSELAFDEAPQDVVNKVFNITLRTIMEGQSIVNVDEIHRAARFFYQARQRDLYGAGGSNAICADVQHKFLRIGVRCQAYPDAHIMMMSASLLQEGDVVLVVTHSGRTSDVKAAVELAKKNGAKIICITHSYHSPIAKLADYIICSPAPETPLLGRNASARILQLTLLDAFFVSVAQLNIEQANINMQKTGAIVDFFSPGALK
1MUSTER3fxaA0.1770.6281.503threading_1---------------------------------------------------------------------------------------------------DKQAILDNIHQTWQEEANAISRLPEVTSEEALVKTVEKIAECTKIVVAGCGTSGVAAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILISKGGNTGELLNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPVSVSKEPDPFNLATASTAVIASFDAVIVCLTYNY----------TKEQFSVIHPGGA-
2SPARKS3shoa0.1540.6152.787threading_2------------------------------------------------------------------------------------------------------DRQQLPVQVFTNDIENLNQTLNQTQPEAIEAAVEAIRADHVIVV--GGFSAAVAVFLGHGLNSLGIRTTVLTEGGSTLTITLANLRPTDLIGVSVWRYLRDTVAALAGAAERGVPT-ALTDSSVSPPARIADHVLVAATRGV----GHSLSPVGLIAVVNLLLAEIAVREPERALAVLREVDRLYREQ--G---
3PROSPECT23shoA0.1480.6152.123threading_3------------------------------------------------------------------------------------------------------DRQQLPVQVFTNDIENLNQTLNQTQPEAIEAAVEAIRADHVI--VVGGFSAAVAVFLGHGLNSLGIRTTVLTEGGSTLTITLANLRPTDLIGVSVWRYLRDTVAALAGAAERGVPTA-LTDSSVSPPARIADHVLVAATRG----VGHSLSPVGLIAVVNLLLAEIAVREPERALAVLREVDRLYREQ-----G
4PPA-I3fxaA0.1770.6282.477threading_4---------------------------------------------------------------------------------------------------DKQAILDNIHQTWQEEANAISRLPEVTSEEALVKTVEKIAECTKIVVAGCGTSGVAAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILISKGGNTGELLNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPVSVSKEPDPFNLATASTAVIASFDAVIVCLTYNY----------TKEQFSVIHPGGA-
5HHPRED-l3sho_A0.1710.6112.491threading_5------------------------------------------------------------------------------------------------------DRQQLPVQVFTNDIENLNQTLNQTQPEAIEAAVEAI-RADHVIVVG-GFSAAVAVFLGHGLNSLGIRTTVLEGGSTLTITLANLRPTDL-IGVSVWRYLRDTVAALAGAAERGVPT-ALTDSSVSPPARIADHVLVAATRGVG----HSLSPVGLIAVVNLLLAEIAVREPERALAVLREVDRLYREQG-----
6HHPRED-g3etn_A0.1880.5952.617threading_6-----------------------------------------------------------------------------------------------------------IESIQELLQKEAQAVLNIPVTDAYEKAVELIVEQGKLVTSG-GKAGQIA-NIATTFCSTGIPSVFLHPSEAQHGDLGILQENDLLLLISNSGKTREIVELTQLAHNPGLKFIVITGNPDSPLASESDVCLSTGHPACTLG-TPTTSTTV-TVIGDILVVQT-KRTEFTIEEYSKR-------HHGGYL-
7SP33fxaa0.1770.6282.762threading_7---------------------------------------------------------------------------------------------------DKQAILDNIHQTWQEEANAISRLPEVTSEEALVKTVEKIAECTKIVVAGCGTSGVAAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILISKGGNTGELLNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPVSVSKEPDPFNLATASTAVIASFDAVIVCLT----------YNYTKEQFSVIHPGGA-
8SAM-T991vimA0.1670.6282.814threading_8---------HGGHMSLLRFLEVVSEH--------------------------------------------------------------------------------------------IKNLRNHIDLETVGEMIKLIDSARSIFVIGAGRSGYIAKAFAMRLMHLGYTVYVVGE-----TVTPRITDQDVLVGISGSGETTSVVNISKKAKDIGSKLVAVTGKRDSSLAKMADVVMVVKGKMKQERDEILSQLAPLGTMFELTAMIFLDALVAEIMMQKHLTEKDLEARHA----
9MUSTER3shoA0.1650.6151.371threading_9-----------------------------------------------------------------------------------------------------DR-QQLPVQVFTNDIENLNQTLNQTQPEAIEAAVEAIR-ADHVIVVG-GFSAAVAVFLGHGLNSLGIRTTVLTEGGSTLTITLANLRPTDLIGVSVWRYLRDTVAALAGAAERGVP-TALTDSSVSPPARIADHVLVAATRGV----GHSLSPVGLIAVVNLLLAEIAVREPERALAVLREVDRLYREQ--G---
10SPARKS3fxaa0.1770.6282.723threading_10---------------------------------------------------------------------------------------------------DKQAILDNIHQTWQEEANAISRLPEVTSEEALVKTVEKIAECTKIVVAGCGTSGVAAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILISKGGNTGELLNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPVSVSKEPDPFNLATASTAVIASFDAVIVCLTYNY----------TKEQFSVIHPGGA-

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.668 to 1jeoA
SCOP code=c.80.1.3
TM-score=0.668 to 1jeoA
SCOP code=c.80.1.3
TM-score=0.644 to 1jeoA
SCOP code=c.80.1.3
TM-score=0.639 to 1jeoA
SCOP code=c.80.1.3
TM-score=0.668 to 1jeoA
SCOP code=c.80.1.3