Template-based Modeling Results for RUTD_ECOLI


  Submitted Primary Sequence

>Length 266
MKLSLSPPPYADAPVVVLISGLGGSGSYWLPQLAVLEQEYQVVCYDQRGTGNNPDTLAEDYSIAQMAAELHQALVAAGIEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWMAARAPRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPTACSSELHAALPDSQKMVMPYGGHACNVTDPETFNALLLNGLASLLHHREAAL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKLSLSPPPYADAPVVVLISGLGGSGSYWLPQLAVLEQEYQVVCYDQRGTGNNPDTLAEDYSIAQMAAELHQALVAAGIEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWMAARAPRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPTACSSELHAALPDSQKMVMPYGGHACNVTDPETFNALLLNGLASLLHHREAAL
CEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHCHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHCHHHHHHHHHHHHHHHCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MKLSLSPPPYADAPVVVLISGLGGSGSYWLPQLAVLEQEYQVVCYDQRGTGNNPDTLAEDYSIAQMAAELHQALVAAGIEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWMAARAPRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPTACSSELHAALPDSQKMVMPYGGHACNVTDPETFNALLLNGLASLLHHREAAL
21010002322411000000000010100120022013200000011210021232222211022001001300210203200000001000000100120021010000000113132203200210121122211310021001101113112232231101101111213122100200100231100310330300000000231220112001101310230100002300000112103100300120022023343234
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMKLSLSPPPYADAPVVVLISGLGGSGSYWLPQLAVLEQEYQVVCYDQRGTGNNPDTLAEDYSIAQMAAELHQALVAAGIEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWMAARAPRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPTACSSELHAALPDSQKMVMPYGGHACNVTDPETFNALLLNGLASLLHHREAAL
1MUSTER3v48A0.9660.9812.624threading_1HKLSLSPPPYADAPVVVLISGLGGSGSYWLPQLAVLEQEYQVVCYDQRGTGNNPDTLAEDYSIA-QAAELHQALVAAGIEHYAVVGHALGALVGQLALDY-PASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADW-AARAPRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPTACSSELHAALPDSQK--VPYGGHACNVTDPETFNALLLNGLASLLHHREAAL
2SPARKS3v48a0.9770.9813.046threading_2HKLSLSPPPYADAPVVVLISGLGGSGSYWLPQLAVLEQEYQVVCYDQRGTGNNPDTLAEDYS-IAQAAELHQALVAAGIEHYAVVGHALGALVG-QLALDYPASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWA-ARAPRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPTACSSELHAALPDSQK--VPYGGHACNVTDPETFNALLLNGLASLLHHREAAL
3PROSPECT23v48A0.9460.9813.843threading_3HKLSLSPPPYADAPVVVLISGLGGSGSYWLPQLAVLEQEYQVVCYDQRGTGNNP-DTLAEDYSIAQAAELHQALVAAGIEHYAVVGHALGALVGQ-LALDYPASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADW-AARAPRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPTACSSELHAALPDSQK--VPYGGHACNVTDPETFNALLLNGLASLLHHREAAL
4PPA-I3v48A0.9540.9812.565threading_4HKLSLSPPPYADAPVVVLISGLGGSGSYWLPQLAVLEQEYQVVCYDQRGTGNNPDTLAEDYS-IAQAAELHQALVAAGIEHYAVVGHALGALVGQLALDY-PASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWA-ARAPRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPTACSSELHAALPDSQK--VPYGGHACNVTDPETFNALLLNGLASLLHHREAAL
5HHPRED-l3v48_A1.0000.9701.663threading_5-KLSLSPPPYADAPVVVLISGLGGSGSYWLPQLAVLEQEYQVVCYDQRGTGNNPDTLAEDYSIAQ-AAELHQALVAAGIEHYAVVGHALGALVG-QLALDYPASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADW-AARAPRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPTACSSELHAALPDSQK---PYGGHACNVTDPETFNALLLNGLASLLHHREAA-
6HHPRED-g3om8_A0.2110.9251.506threading_6DGASLAYRLDGEKPLLALSNSIGTTLH-WDAQLPALTRHFRVLRYDARGHGASSV-PPGPYTLARLGEDVLELLDALEVRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGP--AAQWDERIAAVLQAE-SETAAGFLGNWFPPALLERAEPVV--ERFRA---ATNRHGLAGSFAAVRDTDLRAQLARIERPTLVIAGAYDTVTAASHGELIAASIAGARLVTLP-AVHLSNVEFPQAFEGAVLSFLGA---------
7SP33v48a0.9460.9813.199threading_7HKLSLSPPPYADAPVVVLISGLGGSGSYWLPQLAVLEQEYQVVCYDQRGTGNNPDTL-AEDYSIAQAAELHQALVAAGIEHYAVVGHALGALVGQ-LALDYPASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWAARA-PRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRIRCPVQIICASDDLLVPTACSSELHAALPDSQK--VPYGGHACNVTDPETFNALLLNGLASLLHHREAAL
8SAM-T993om8A0.1980.9322.399threading_8AGNLSFLATS-AEKPLLALSNSIGTTLHWDAQLPALTRHFRVLRYDARGHGASSVP-PGPYTLARLGEDVLELLDALEVRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGPAA--QWDERIAAVLQAEDSETAAGFLGNWFPPALLERAEPVVER----FRALATNRHGLAGSFAAVRDTDLRAQLARIERPTLVIAGAYDTVTAASHGELIAASIAGARLVTLP-AVHLSNVEFPQAFEGAVLSFLGA---------
9MUSTER3om8A0.2140.9322.342threading_9L-ASLAYRLDGAAKPLLALSNSIGTTLHWDAQLPALTRHFRVLRYDARGHGASSVP-PGPYTLARLGEDVLELLDALEVRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGP--AAQWDERIAAVLQAEDSETAAGFLGNWFPPALLERAEPVVERFRAL----ATNRHGLAGSFAAVRDTDLRAQLARIERPTLVIAGAYDTVTAASHGELIAASIAGARLVTLP-AVHLSNVEFPQAFEGAVLSFLGA---------
10SPARKS3hysa0.2140.9663.008threading_10RVINLAYDDNGTGDPVVFIAGRGGAGRTWHPQVPAFLAGYRCITFDNRGIGATENAE--GFTTQTMVADTAALIETLDIAPARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRLDRARQFFNKAEAELYDSGPPTYDARARLLENFSRKTLNDDVAVGDWIAMFSMWPIKSTPGLRCQLDCAPQTNRLPAYRNIAAPVLVIGFADDVVTPPYLGREVADALPNGRYLQIPDAGHLGFFERPEAVNTAMLKFFASVK-------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.840 to 1a88A
SCOP code=c.69.1.12
TM-score=0.840 to 1a88A
SCOP code=c.69.1.12
TM-score=0.842 to 1a88A
SCOP code=c.69.1.12
TM-score=0.838 to 1a88A
SCOP code=c.69.1.12
TM-score=0.840 to 1a88A
SCOP code=c.69.1.12