Template-based Modeling Results for SFMF_ECOLI


  Submitted Primary Sequence

>Length 171
MRRVLFSCFCGLLWSSSGWAVDPLGTININLHGNVVDFSCTVNTADIDKTVDLGRWPTTQLLNAGDTTALVPFSLRLEGCPPGSVAILFTGTPASDTNLLALDDPAMAQTVAIELRNSDRSRLALGEASPTEEVDANGNVTLNFFANYRALASGVRPGVAKADAIFMINYN
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MRRVLFSCFCGLLWSSSGWAVDPLGTININLHGNVVDFSCTVNTADIDKTVDLGRWPTTQLLNAGDTTALVPFSLRLEGCPPGSVAILFTGTPASDTNLLALDDPAMAQTVAIELRNSDRSRLALGEASPTEEVDANGNVTLNFFANYRALASGVRPGVAKADAIFMINYN
CCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEECCCEECCCCCCEEEECCCEEHHHHHCCCCCCCCEEEEEEEECCCCCCEEEEEEEEECCCCCEEEECCCCCCCEEEEEEECCCCCEEECCCCCCCEEECCCCEEEEEEEEEEEECCCCCCCEEEEEEEEEEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MRRVLFSCFCGLLWSSSGWAVDPLGTININLHGNVVDFSCTVNTADIDKTVDLGRWPTTQLLNAGDTTALVPFSLRLEGCPPGSVAILFTGTPASDTNLLALDDPAMAQTVAIELRNSDRSRLALGEASPTEEVDANGNVTLNFFANYRALASGVRPGVAKADAIFMINYN
432100000000000000101132220201020100211020222322120200200121023223222211010202102322000001011122220000222211210000011233220111322222202241201010000020122203201020101010226
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMRRVLFSCFCGLLWSSSGWAVDPLGTININLHGNVVDFSCTVNTADIDKTVDLGRWPTTQLLNAGDTTALVPFSLRLEGCPPGSVAILFTGTPASDTNLLALDDPAMAQTVAIELRNSDRSRLALGEASPTEEVDANGNVTLNFFANYRALASGVRPGVAKADAIFMINYN
1MUSTER2jmrA0.3180.8652.126threading_1-----------------------MADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFNNIGATTPVVPFRILLSPCGNSAVKVGFTGVADHNANLLALETVSAASGLGIQLLNEQQNQIPLNAPSSATTLTPGKPNTLNFYARLMATQVPVTAGHINATATFTLEYQ
2SPARKS3jwne0.2990.8603.904threading_2------------------------ADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFNNIGATTPVVPFRILLSPCGNAAVKVGFTGVADSHNANLLANTVSAAAGLGIQLLNEQQNQIPLNAPSSATTLTPGKPNTLNFYARLMATQVPVTAGHINATATFTLEYQ
3PROSPECT23bfqG0.2460.7602.332threading_3------------------------------------AKPCTVSTTNAT--VDLGDLYSFSLMSAGAASAWHDVALELTNCPVGRVTASFSGAADSTGYY---KNQGTAQNIQLELQDDSGNTLNTGATKTVQVDDSSQSAHFPLQVRALTVNGGATQGTIQAVISITYTYS
4PPA-I3bfwA0.2270.7722.740threading_4------------------------------------AKPCTVSTTNAT--VDLGDLYSFSLMSAGAASAWHDVALELTNCPVGTSRVTASFSGAADSTGYYK-NQGTAQNIQLELQDDSGNTLNTGATKTVQVDDSSQSAHFPLQVRALTVNGGATQGTIQAVISITYTYS
5HHPRED-l2jty_A0.2930.8774.256threading_5-------------------AATTVNGGTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLAQEGATSSAVGFNIQLNDCDTNKAAVAFLGTADAGHTNVLASAAGSATNVGVQILDRTGAALTLDGATSSETTLNNGTNTIPFQARYFATG-AATPGAANADATFKVQY-
6HHPRED-g2uy6_B0.1870.8134.027threading_6---------------------------KVTFNNTVVDAPCSISQKSADQSIDFGQLSKSFLEAGGV-SKPMDLDIELVNCDITTVKLAFTGPIVNGHSDELDT-NGGTGL-AIVV-QGAGKNVVFDGEGDANT-LKDGENVLHYTAVVKKVGAAVTEGAFSAVANFNLTYQ
7SP33jwne0.2990.8603.954threading_7------------------------ADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFNNIGATTPVVPFRILLSPCGNAAVKVGFTGVADSHNANLLENTVSAAAGLGIQLLNEQQNQIPLNAPSSATTLTPGKPNTLNFYARLMATQVPVTAGHINATATFTLEYQ
8SAM-T992jtyA0.2930.8774.800threading_8-------------------AATTVNGGTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLAQEGATSSAVGFNIQLNDCDTNKAAVAFLGTADAGHTNVLALQSGSATNVGVQILDRTGAALTLGATFSSETTLNNGTNTIPFQARYFATGA-ATPGAANADATFKVQY-
9MUSTER2jtyA0.3310.8832.097threading_9-------------------AATTVNGGTVHFKGEVVNAACAVDAGSVDQTVQLGQVRTASLAQEGATSSAVGFNIQLNDCDTSKAAVAFLGTAAGHTNVLALQSSGSATNVGVQILDRTGAALTLDGATFSETTLNNGTNTIPFQARYFATG-AATPGAANADATFKVQYQ
10SPARKS3jwng0.2540.8303.617threading_10------------------------ADVTITVNGKVVAKPCTVS--TTNATVDLGDLYSFSLMSAGAASAWHDVALELTNCPVGTVTASFSGAADSTG---YYKNQGTAQNIQLELQDDSGNTLNTGATKTVQVDDSSQSAHFPLQVRALTVNGGATQGTIQAVISITYTYS

  Predicted Tertiary Structure

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TM-score=0.708 to 1klfP
SCOP code=b.2.3.2
TM-score=0.801 to 2j2zB
SCOP code=b.2.3.2
TM-score=0.692 to 1klfP
SCOP code=b.2.3.2
TM-score=0.689 to 1pdkB
SCOP code=b.2.3.2
TM-score=0.691 to 1pdkB
SCOP code=b.2.3.2