Template-based Modeling Results for SGCR_ECOLI


  Submitted Primary Sequence

>Length 260
MSQQRPDRIKQMLHYLWQHRHLSTQQAMELFGYAEATVRRDFQYIVNQYPGMIRGHGCLDFDDSTDDKEYVFDVKRTLQSVAKREIAALARTMIKDGDCFFLDSGSTCLELAKCLADARVKVICNDIKIANELGCFPHVESYIIGGLIRPGYFSVGESLALEMINAFSVERAFISCDALSLETGITNATMFEVGVKTRIIQRSREVILMADHSKFDAVEPHAVATLSCIKTIISDSGLPETIAQRYQRAGCQLFLPHSIK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSQQRPDRIKQMLHYLWQHRHLSTQQAMELFGYAEATVRRDFQYIVNQYPGMIRGHGCLDFDDSTDDKEYVFDVKRTLQSVAKREIAALARTMIKDGDCFFLDSGSTCLELAKCLADARVKVICNDIKIANELGCFPHVESYIIGGLIRPGYFSVGESLALEMINAFSVERAFISCDALSLETGITNATMFEVGVKTRIIQRSREVILMADHSKFDAVEPHAVATLSCIKTIISDSGLPETIAQRYQRAGCQLFLPHSIK
CCCCHHHHHHHHHHHHHHCCCEEHHHHHHHHCCCHHHHHHHHHHHHHHCCCEEEECCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHCCCCEEEEECCEEECCCCCEECHHHHHHHHCCCCCEEEEECCEECCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCEEEEEEECHHHCCEEEECCCCCHHHHHHHHHCCCEEEECCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MSQQRPDRIKQMLHYLWQHRHLSTQQAMELFGYAEATVRRDFQYIVNQYPGMIRGHGCLDFDDSTDDKEYVFDVKRTLQSVAKREIAALARTMIKDGDCFFLDSGSTCLELAKCLADARVKVICNDIKIANELGCFPHVESYIIGGLIRPGYFSVGESLALEMINAFSVERAFISCDALSLETGITNATMFEVGVKTRIIQRSREVILMADHSKFDAVEPHAVATLSCIKTIISDSGLPETIAQRYQRAGCQLFLPHSIK
55333221132002102524212032004202102110120032014323100101100102322333322131132121311310011023004311000000000011003102312010000002001100313301000010101222200012101200320100100000100113210111122101011200221310000013131312000000102203000012202320032035120100003335
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMSQQRPDRIKQMLHYLWQHRHLSTQQAMELFGYAEATVRRDFQYIVNQYPGMIRGHGCLDFDDSTDDKEYVFDVKRTLQSVAKREIAALARTMIKDGDCFFLDSGSTCLELAKCLADARVKVICNDIKIANELGCFPHVESYIIGGLIRPGYFSVGESLALEMINAFSVERAFISCDALSLETGITNATMFEVGVKTRIIQRSREVILMADHSKFDAVEPHAVATLSCIKTIISDSGLPETIAQRYQRAGCQLFLPHSIK
1SPARKS2w48a0.1210.8881.171threading_1--SDDIRLIVKIAQLYYEQD-MTQAQIARELGIYRTTISRLLKRGREQ-GIVT------IAINYDYNENLWLEQQLKQKEEQLSAMGQHGALLVEPGDIIGFSWGRAVRSLVENLPSRQVICVPHVNTLTYGAAARDSLDVALVGGSPAIRDGAFYGSEESDDLNARHV-AGDICSRFYDINGGLVDTNMSELSIEMAKLRQARYSIGIAGEEK--YSGILGALHGRYINCLVTN----RETAELLLK------------
2PROSPECT22w48A0.1150.9381.624threading_2---SDDIRLIVKIAQLYYEQDMTQAQIARELGIYRTTISRLLKRGREQGIV-----------TIAINYDYNENLWLEQQLKQKQHGALLVDRLLEPGDIIGFSWGRAVRSLVENLPQRQVICVPHVNTLTYGAAARLKAESHLADFPALLDNPLMQSQHFKTISSYWDLDVALVGIGSPAIRDGANWHAFYGSEESDDLNA--RHVAGDIGLVDTNMSEKTLSIEMAKARYSIMGEEKYSGILGALHGRYINCLVTNREK
3PPA-I1m0sA0.1320.6121.403threading_3----------------------------------------------------------------------------MNQLEMKKLAAQAALQYVKADRIVGVGSGSTVNCFIEALKDKIQGAVAASKESEELLRKQ--------GIEVFNANDV------------SSLDIYVDGADEINPQKMMIKGGGAALTREKIVAALAKKFICIVDSSKQVDVLGSTFPL-----PVEVIPMARSQVGRKLAALGGSPEYREGVV
4SAM-T991i1gA10.1570.1961.144threading_4----IDERDKIILEILEKDARTPFTEIAKKLGISETAVRKRVKALEEK-GIIE-----------GYT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5HHPRED-l3rrl_B0.1440.6423.679threading_5----------------------------------------------------------------------------------REAIIKRAAKELKEG-YVNLGIGLPT-LVANEVSG-NIVFQSENGLLGYPLEGSVDADLINAGKEVVPGASFFNSADSFA-IRGGHIDLAILGG-EVSQNGDLANW-IPKKLIK-DLVHGAKKVIVI-EHCNKGESKVKKECSLGVVHQLITDLAVFEFSDQVKEKTEAEFEVRL---
6SPARKS1vb5a0.1770.8461.037threading_6----LPERVLEILREMKREAKKGAEAFLTLAELDESLLEDAIMELREE---VVKVNPSMALARFIPVTNRRALEFLRRMEEAKRELASIGAQLIDDGDVIITSFSSTVLEIIRTARKKRFKVILEGLHLARELEFS-GIEFEVI------------TDAQMGLFCR-EASIAIVGADMITKDGYVVNKA-GTYLLALACHENAIPFYVAAETYKFHPTLLFDVTPWKYVRGIITELGIPRDI------------------
7HHPRED-g3rrl_B0.1450.6353.310threading_7----------------------------------------------------------------------------------REAIIKRAAKELKEG-YVNLGIGLPT-LVANEVSG-NIVFQSENGLLGYPLEGSVDADLINAGKEVVPGASFFNSADSFA-IRGGHIDLAILGG-EVSQNGDLANW-IPKKLIK-DLVHGAKKVIVI-EHCNKGESKVKKECSLGVVHQLITDLAVSLDQVKEKTEAEFEVRL-----
8PROSPECT21j5ya0.1200.6381.392threading_8-KTVRQERLKSIVRILERKEPVSGAQLAEELSVSRQVIVQDIAYLRSLGYNIVATPRGYVLAGGKSGVS-----RLVAVKHAPEEIKEELLCVVRNGGRIVD------------------------------------VIVEHPVYGEIRGIIDVSSEEEVLKFVN-------------LEAKTEPLLTLSGG-------------VHLH--------------------TIEAPDEET-ERIRELKKKGFLI-----EE
9SP31ks2a10.1560.5191.080threading_9-----------------------------------------------------------------------------TQDELKKAVGWAALQYVQPGTIVGVGTGSTAAHFIDALGTQIEGAVSSSDASTEKLKSL--------GIHVFD-------------LNEVSLGIYVDGADEINGH--QIKGGGAALTREKIIASVAEKFICIADASKQ-------------VDIL-ANRGAD-----------VALIGTPDGV
10MUSTER2w48B0.1270.8770.746threading_10-NSDDIRLIVKIAQLYYEQD-MTQAQIARELGIYRTTISRLLKRGREQ-GILKQKFG-AVVASSDGLL----------EEEQLSAMGQHGALLVEPGDIIGFSWGRAVRSLVENLPQRQVICVPHVNTLTYGAAARDSLDVALVGGSPAIRDHAFYGSEESDDLNARHV-AGDICSRFYDINGGLVDTNMSELSIEMAKLRQARYSIGIA-MGEEKYSGILGALHGRYINCLVTN----RETAELLLK------------

  Predicted Tertiary Structure

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TM-score=0.600 to 2gnpA
SCOP code=c.124.1.8
TM-score=0.631 to 2gnpA
SCOP code=c.124.1.8
TM-score=0.650 to 1m0sA
SCOP code=c.124.1.4
TM-score=0.560 to 1i1gA
SCOP code=a.4.5.32
TM-score=0.640 to 2nrcB
SCOP code=c.124.1.3