Template-based Modeling Results for TLDD_ECOLI

Submitted Primary Sequence

>Length 481
MSLNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNIDQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRDSGDGKVQTLGAVEHSPLYTSVDPLQSMSREEKLDILRRVDKVAREADKRVQEVTASLSGVYELILVAATDGTLAADVRPLVRLSVSVLVEEDGKRERGASGGGGRFGYEFFLADLDGEVRADAWAKEAVRMALVNLSAVAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQVGELVASELCTVVDDGTMVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGMTPTGNGRRESYAHLPMPRMTNTYMLPGKSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVTKPVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGGTA
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSLNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNIDQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRDSGDGKVQTLGAVEHSPLYTSVDPLQSMSREEKLDILRRVDKVAREADKRVQEVTASLSGVYELILVAATDGTLAADVRPLVRLSVSVLVEEDGKRERGASGGGGRFGYEFFLADLDGEVRADAWAKEAVRMALVNLSAVAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQVGELVASELCTVVDDGTMVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGMTPTGNGRRESYAHLPMPRMTNTYMLPGKSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVTKPVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGGTA
CCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEEEECCEEEEEEEEEEEEEEEEEEECCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEEEEEEEEEECCCCEEEEEEEEEEEEEEEEEEECCCEEEEECCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCHHHHHCCCCHHHHHCCCEECCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEECCEEEHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEEEEEEEEEECCEEEEEEEEEEEEEEHHHHHHHHHHCCCCEEEECCCCCCCCCCCEEECCCCCCCEEECCEEEECCC
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSLNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNIDQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRDSGDGKVQTLGAVEHSPLYTSVDPLQSMSREEKLDILRRVDKVAREADKRVQEVTASLSGVYELILVAATDGTLAADVRPLVRLSVSVLVEEDGKRERGASGGGGRFGYEFFLADLDGEVRADAWAKEAVRMALVNLSAVAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQVGELVASELCTVVDDGTMVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGMTPTGNGRRESYAHLPMPRMTNTYMLPGKSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVTKPVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGGTA
4423101221022311323101200120143412201000110221001023320230211112000010012311000002312220022002001200322231313212223323212212223212332112002201300241232011020000011100000012112011110002000000012233211002111121013101231313230310022002101320212203101010000110001000200000020211232111001312220013101001111023220001013310201111001201020100001003212221101022211221112200000012132113200320320000010110212221020000012000012020120021000001012002101200310201101120133121011111111020220201134
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSLNLVSEQLLAANGLKHQDLFAILGQLAERRLDYGDLYFQSSYHESWVLEDRIIKDGSYNIDQGVGVRAISGEKTGFAYADQISLLALEQSAQAARTIVRDSGDGKVQTLGAVEHSPLYTSVDPLQSMSREEKLDILRRVDKVAREADKRVQEVTASLSGVYELILVAATDGTLAADVRPLVRLSVSVLVEEDGKRERGASGGGGRFGYEFFLADLDGEVRADAWAKEAVRMALVNLSAVAAPAGTMPVVLGAGWPGVLLHEAVGHGLEGDFNRRGTSVFSGQVGELVASELCTVVDDGTMVDRRGSVAIDDEGTPGQYNVLIENGILKGYMQDKLNARLMGMTPTGNGRRESYAHLPMPRMTNTYMLPGKSTPQEIIESVEYGIYAPNFGGGQVDITSGKFVFSTSEAYLIENGKVTKPVKGATLIGSGIETMQQISMVGNDLKLDNGVGVCGKEGQSLPVGVGQPTLKVDNLTVGGTA
1	SPARKS	3qtda	0.193	0.894	8.249	threading_1	----------VGPSVLPREQVEQIIAEARRQGASACEVAVSLEQGLSTSVRQGEVETVEFNRDQGFGITLYAGQRKGSASTSATGEAAIRETVAAALAIARHTSEDECAGLADAALARELPELDHPWSLSPEQAVERALACEAAAFAADKRVTKADTTLNTHQGCRVYGNSHGFIGGYASTRHSLSC--VIAEGEGQQRDYWYDVNR--------RGEALASAESIGRRAAERAASRLGARPVQTAEVPVLFAPEIAVGLFGHFLGA-ISGGSLYRKSSFLEGALGQRLFPEWLSIDERPHLVGALGSASFDSDGLATYAKPFVENGELVSYVLGTYSGRKLGLPSTANA----------GGVHNLFVSHGDEDQAALIRR-ERGLLVTELGQG-VNLVTGDYSRGAAGYWVE-NGEIQFPVQEVTIAANLRDLFRRIVAVGKDIERRGNLHT--------------GSVLVESV--AGR-
2	PROSPECT2	1vl4A	0.207	0.886	5.860	threading_2	----------------TFEEFKDRLFALAKKNGVEVQISFLETREFSLRLANGDLDQYTDAGKFNVEIKVLKDGKTGTFRTQVLE--NPEKCFEEALSNLQVKKEYFFEGGK--EYREMETYVGRFEKLSVKEKMDMAKKAHESAAKDERVVMVPTVMYKDMVIKKIITNTLGLDVESQMDGGFLFAMAIARDANPRSGSWYELART----------PEDLNPEEIGKRAAEEAISLIGSKTIPSGKYPVLMRN-TALLDLMEMFIPMISAENVQKNLSPLKGKLGEQVGNPAVSIKDLPYHPKGLSSTPFDDEGVPTTEKFVLENGVLKTFLHNLKTARKEGVEPTGNGFV------GGIRPVNLMLMPGEKSFEELLKEMDRGVVITEVEGMHANSISGEFSLFA-KGYWVENGEIAHGVEDITISGNFLDLLRKIVLVGNDVKVSQHT--------------IAPSVLVEVLDV---A
3	PPA-I	3qtdA	0.198	0.894	6.254	threading_3	----------VGPSVLPREQVEQIIAEARRQGASACEVAVSLEQGLSTSVRQGEVETVEFNRDQGFGITLYAGQRKGSASTSATGEAAIRETVAAALAIARHTSEDECAGLADAALARELPELYHPWSLSPEQAVERALACEAAAFAADKRVTKADGTTLNTHQGCRVYGNHGFIGGYASTRHSLSCVIAEGEG--QQRDYWYDVNRRG--------EALASAESIGRRAAERAASRLGARPVQTAEVPVLFAPEIAVGLFGHFLGAIS-GGSLYRKSSFLEGALGQRLFPEWLSIDERPHLVGALGSASFDSDGLATYAKPFVENGELVSYVLGTYSGRKLGLPSTANA----------GGVHNLFVSHGDEDQAALIRR-ERGLLVTELGQG-VNLVTG-DYSRGAAGYWVENGEIQFPVQEVTIAANLRDLFRRIVAVGKDIERRGNLHT--------------GSVLVESV--AGR-
4	HHPRED-l	1vpb_A	0.200	0.894	7.273	threading_4	---------MIT--DENKKLAQWAMDYALKNGCQAAKVLLYSSSNTSFELRD--MDRLQQASEGGLSLSLYVDGRYGSISTNRLNRKELETFIKNGIDSTRYLAKDEARVLADPSRYDLKLYDAKFASLNPDDKIEMAKAVAEEALGKDERIISVGSSYGDGEDFAYRLISNGFEGETKSTWYSLSADITIRGEGEARSAYWYE---------SSLYMNDLIKKGIGQKALERVLRKLGQKKVQSGKYTMVVDPMNSSRLLSPMIS-ALNGSALQQKNSFLLNKLNEKIASDRLTLTDEPHLVKASGARYFDNEGIATERRSIFDKGVLNTYFIDTYNAKKMGVDPTISG------------SSILVMETGDKNLDGLIAGVEKGILVTGFNGGNNNSSTGDFSYGI-EGFLIENGKLTQPVSEMNVTGNLITLWNSLVATGNDPRLNSS--------------WRIPSLVFEGVDFSGL-
5	HHPRED-g	3qtd_A	0.200	0.892	5.993	threading_5	----------VGPSVLPREQVEQIIAEARRQGASACEVAVSLEQGLSTSVRQGEVETVEFNRDQGFGITLYAGQRKGSASTSATGEAAIRETVAAALAIARHTSEDECAGLADAALARELPLYHPW-SLSPEQAVERALACEAAAFAADKRVTKAGTTLNTHQGCRVYGNSHGFIGGYASTRHSLSCV-IAEGEGQ-QRDYWYDVNR-RGEALA-------SAESIGRRAAERAASRLGARPVQTAEVPVLFAPEIAVGLFG-HFLGAISGGSLYRKSSFLEGALGQRLFPEWLSIDERPHLVGALGSASFDSDGLATYAKPFVENGELVSYVLGTYSGRKLGLPSTANAGGV----------HNLFVSHGDEDQAALIRR-ERGLLVTEL-GQGVNLVTGDYSRGAA-GYWVENGEIQFPVQEVTIAANLRDLFRRIVAVGKDIERRG--------------NLHTGSVLVES--VAGR-
6	SP3	3qtda	0.200	0.894	8.383	threading_6	----------VGPSVLPREQVEQIIAEARRQGASACEVAVSLEQGLSTSVRQGEVETVEFNRDQGFGITLYAGQRKGSASTSATGEAAIRETVAAALAIARHTSEDECAGLADAALARELPELDHPWSLSPEQAVERALACEAAAFAADKRVTKADTTLNTHQGCRVYGNSHGFIGGYASTRHSLSC-VIAEGEG-QQRDYWYDVNRRGEALA--------SAESIGRRAAERAASRLGARPVQTAEVPVLFAPEIAVGLFGHFLGA-ISGGSLYRKSSFLEGALGQRLFPEWLSIDERPHLVGALGSASFDSDGLATYAKPFVENGELVSYVLGTYSGRKLGLPSTANA----------GGVHNLFVSHGDEDQAALIRR-ERGLLVTELGQG-VNLVTGDYSRGAAGYWVE-NGEIQFPVQEVTIAANLRDLFRRIVAVGKDIERRGNLHT--------------GSVLVESV--AGR-
7	SAM-T99	1vl4A	0.212	0.881	6.351	threading_7	---------------TFEEFKDRLFALAKKNGVEV-QISFLETREFSLRLANGDLDQYTDAGKFNVEIKVLKDGKTGTFRTQVLE--NPEKCFEEALSNLQV--KKEYFFEGGKEYREMETYVGRFEKLSVKEKMDMAKKAHESAA-KDERVVMVPVMYKDMVIKKIITNTLGLDVESQMDGGFLFAMAIARDANPRS----------GSWYELARTPEDLNPEEIGKRAAEEAISLIGSKTIPSGKYPVLMRNTALLDLM-EMFIPMISAENVQKNLSPLKGKLGEQVGNPAVSIKDLPYHPKGLSSTPFDDEGVPTTEKFVLENGVLKTFLHNLKTARKEGVEPTGNGFVGG------IRPVNLMLMPGEKSFEELLKEMDRGVVITEVEGAGANSISGEFSLFAK-GYWVENGEIAHGVEDITISGNFLDLLRKIVLVGNDVKVSQ--------------HTIAPSVLVEVLDV----
8	SPARKS	1vpba	0.200	0.896	7.196	threading_8	---------MITDE--NKKLAQWAMDYALKNGCQAAKVLLYSSSNTSFELRD--MDRLQQASEGGLSLSLYVDGRYGSISTNRLNRKELETFIKNGIDSTRYLAKDEARVLADGGKPDLKLYDAKFASLNPDDKIEMAKAVAEEALGKDERIISVGSSYGDGEDFAYRLISNGFEGETKSTWYSLSADITIRGEGEARPSAYWYESSLY--------MNDLIKKGIGQKALERVLRKLGQKKVQSGKYTMVVDPMNSSRLLSPMISA-LNGSALQQKNSFLLNKLNEKIASDRLTLTDEPHLVKASGARYFDNEGIATERRSIFDKGVLNTYFIDTYNAKKMGVDPTISGS------------SILVMETGDKNLDGLIAGVEKGILVTGFNGGNNNSSTG-DFSYGIEGFLIENGKLTQPVSEMNVTGNLITLWNSLVATGNDPRLNSSWRI--------------PSLVFEGVDFSGL-
9	PROSPECT2	1vpbA	0.204	0.896	5.848	threading_9	MITDENKK-----------LAQWAMDYALKNGCQAAKVLLYSSSNTSFELRD--MDRLQQASEGGLSLSLYVDGRYGSISTNRLNRKELETFIKNGIDSTRYLAKDEARVLYKGGKPDLKLYDAKFASLNPDDKIEMAKAVAEEALGKDERIISVGSSYGDGEDFAYRLISNGFEGETKSTWYSLSADITIRGEGEARPSAYWYESSLYMN--------DLIKKGIGQKALERVLRKLGQKKVQSGKYTMVVDPMNSSRLLSPMISA-LNGSALQQKNSFLLNKLNEKIASDRLTLTDEPHLVKASGARYFDNEGIATERRSIFDKGVLNTYFIDTYNAKKMGVDPTISG------------SSILVMETGDKNLDGLIAGVEKGILVTGFNGGNNNSSTGDFSYGI-EGFLIENGKLTQPVSEMNVTGNLITLWNSLVATGNDPRLNSSW--------------RIPSLVFEGVDFSGL-
10	PPA-I	1vl4A	0.197	0.886	6.251	threading_10	----------------TFEEFKDRLFALAKKNGVEVQISFLETREFSLRLANGDLDQYTDAGKFNVEIKVLKDGKTGTFRTQVLE--NPEKCFEEALSNLQVKKEYFFEGGKEYREMETYV--GRFEKLSVKEKMDMAKKAHESAAKDERVVMVPTVMYKDMVIKKIITNTLGLDVESQMDGGFLFAMAIARDANPRSGSWYELARTP----------EDLNPEEIGKRAAEEAISLIGSKTIPSGKYPVLMRN-TALLDLMEMFIPMISAENVQKNLSPLKGKLGEQVGNPAVSIKDLPYHPKGLSSTPFDDEGVPTTEKFVLENGVLKTFLHNLKTARKEGVEPTGNGFV------GGIRPVNLMLMPGEKSFEELLKEMDRGVVITEVEGAGANSISG-EFSLFAKGYWVENGEIAHGVEDITISGNFLDLLRKIVLVGNDVKVSQH--------------TIAPSVLVEVLDVA---

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.932 to 1vl4A SCOP code=d.283.1.1	TM-score=0.890 to 1vpbA SCOP code=d.283.1.1	TM-score=0.934 to 1vl4A SCOP code=d.283.1.1	TM-score=0.891 to 1vpbA SCOP code=d.283.1.1	TM-score=0.914 to 1vpbA SCOP code=d.283.1.1