Template-based Modeling Results for TORR_ECOLI


  Submitted Primary Sequence

>Length 230
MPHHIVIVEDEPVTQARLQSYFTQEGYTVSVTASGAGLREIMQNQSVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRSDRIDRIVGLEMGADDYVTKPLELRELVVRVKNLLWRIDLARQAQPHTQDNCYRFAGYCLNVSRHTLERDGEPIKLTRAEYEMLVAFVTNPGEILSRERLLRMLSARRVENPDLRTVDVLIRRLRHKLSADLLVTQHGEGYFLAADVC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MPHHIVIVEDEPVTQARLQSYFTQEGYTVSVTASGAGLREIMQNQSVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRSDRIDRIVGLEMGADDYVTKPLELRELVVRVKNLLWRIDLARQAQPHTQDNCYRFAGYCLNVSRHTLERDGEPIKLTRAEYEMLVAFVTNPGEILSRERLLRMLSARRVENPDLRTVDVLIRRLRHKLSADLLVTQHGEGYFLAADVC
CCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEECCCCHHHEEEEECCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCEEEECCCEEEEECCEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCEEECCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MPHHIVIVEDEPVTQARLQSYFTQEGYTVSVTASGAGLREIMQNQSVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRSDRIDRIVGLEMGADDYVTKPLELRELVVRVKNLLWRIDLARQAQPHTQDNCYRFAGYCLNVSRHTLERDGEPIKLTRAEYEMLVAFVTNPGEILSRERLLRMLSARRVENPDLRTVDVLIRRLRHKLSADLLVTQHGEGYFLAADVC
55120001212320021021103321110000210200220034210000000020143200200210254130000000031132010000100010100210213000000120012033243233323320020110000121010223322030131101001000212222111320021012130322222001000310053023210000111001121332
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMPHHIVIVEDEPVTQARLQSYFTQEGYTVSVTASGAGLREIMQNQSVDLILLDINLPDENGLMLTRALRERSTVGIILVTGRSDRIDRIVGLEMGADDYVTKPLELRELVVRVKNLLWRIDLARQAQPHTQDNCYRFAGYCLNVSRHTLERDGEPIKLTRAEYEMLVAFVTNPGEILSRERLLRMLSARRVENPDLRTVDVLIRRLRHKLSADLLVTQHGEGYFLAADVC
1MUSTER2oqrA0.3530.9613.607threading_1-ATSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSGTDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGGDDDSEMS---DGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLIDRVWGADYVG-DTKTLDVHVKRLRSKIEADHLVTVRGLGYKLE----
2SPARKS1ys6a0.3180.9573.896threading_2-SPRVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATENRPDAIVLDINMPVLDGVSVVTALRAMDDVPVCVLSARVD--DRVAGLEAGADDYLVKPFVLAELVARVKALLRRRG----STATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAA-DTNVVDVFIGYLRRKLEAGLLHTVRGVGFVLRMQ--
3PROSPECT21ys6A0.3140.9574.267threading_3-SPRVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATENRPDAIVLDINMPVLDGVSVVTALRAMNDVPVCVLSARVD--DRVAGLEAGADDYLVKPFVLAELVARVKALLRRRG----STATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAA-DTNVVDVFIGYLRRKLEPRLLHTVRGVGFVLRMQ--
4PPA-I2oqrA0.3530.9614.109threading_4-ATSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSGTDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG---DDDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLIDRVWGADYVG-DTKTLDVHVKRLRSKIEADHLVTVRGLGYKLE----
5HHPRED-l2gwr_A0.3510.9173.049threading_5-RQRILVVDDDASLAE-LTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDL-LPG-NGIDVCRVLRADSGVPIV-LTAKTDTVDVVLGLESGADDYI-KPFKPKELVARVRARLRRNDD-------EPAE-LSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLEQVWGYR---ADTRLVNVHVQRLRAKVEKTVVLTVRGVGYKAGPP--
6HHPRED-g2gwr_A0.3510.9172.589threading_6-RQRILVVDDDASLAE-LTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDL-LPG-NGIDVCRVLRADSGVPIV-LTAKTDTVDVVLGLESGADDYI-KPFKPKELVARVRARLRRNDD-------EPAE-LSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLEQVWGYR--A-DTRLVNVHVQRLRAKVEPTVVLTVRGVGYKAGPP--
7SP31ys6a0.3180.9573.738threading_7-SPRVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATENRPDAIVLDINMPVLDGVSVVTALRAMNDVPVCVLSARVD--DRVAGLEAGADDYLVKPFVLAELVARVKALLRRRGS----TATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAA-DTNVVDVFIGYLRRKLEARLLHTVRGVGFVLRMQ--
8SAM-T992oqrA0.3470.9523.405threading_8--TSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSGTDVCKQLRARSSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGG---DDDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLIDRVWGADY-VGDTKTLDVHVKRLRSKIEPVHLVTVRGLGYKL-----
9MUSTER1ys6B0.3110.9653.452threading_9-SPRVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATENRPDAIVLDINMPVLDGVSVVTALRAMNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVKALLRRRGSTATSSSE----TITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYDFAA-DTNVVDVFIGYLRRKLGPRLLHTVRGVGFVLRMQ--
10SPARKS3r0ja0.2930.9353.535threading_10PEARVLVVDDEANIVELLSVSLKFQGFEVYTATNGAQALDRARETRPDAVILDVPG---DGFGVLRRLRADGDAPALFLTARDSLQDKIAGLTLGGDDYVTKPFSLEEVVARLRVILRRAG---------KNVRLTFADIELDEETHEVWKAGQPVSLSPTEFTLLRYFVINAGTVLSKPKILDHVWRYDFGG-DVNVVESYVSYLRRKIEKRLLHTLRGVGYVLREP--

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.603 to 1ys6B
TM-score=0.639 to native
SCOP code=a.4.6.1
TM-score=0.602 to 1ys6B
TM-score=0.637 to native
SCOP code=a.4.6.1
TM-score=0.927 to 1ys6B
TM-score=0.868 to native
SCOP code=a.4.6.1
TM-score=0.931 to 1ys6B
TM-score=0.868 to native
SCOP code=a.4.6.1
TM-score=0.599 to 1ys6B
TM-score=0.637 to native
SCOP code=a.4.6.1

  Experimental Structure

Download 1zgzA
SCOP code=c.23.1.1