Template-based Modeling Results for TRMJ_ECOLI


  Submitted Primary Sequence

>Length 246
MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGNKAE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGNKAE
CCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCCCCCCCCEEECCHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGNKAE
544201000120211110000010041010110000211132222000100111210120200210320131020000011222222221121320022001211322000000223220233002302100000012312011000000000010011112233323313333222121311220011012002202113331122002101200220303131010011001102222423334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMLQNIRIVLVETSHTGNMGSVARAMKTMGLTNLWLVNPLVKPDSQAIALAAGASDVIGNAHIVDTLDEALAGCSLVVGTSARSRTLPWPMLDPRECGLKSVAEAANTPVALVFGRERVGLTNEELQKCHYHVAIAANPEYSSLNLAMAVQVIAYEVRMAWLATQENGEQVEHEETPYPLVDDLERFYGHLEQTLLATGFIRENHPGQVMNKLRRLFTRARPESQELNILRGILASIEQQNKGNKAE
1MUSTER3ilkA0.5060.9392.746threading_1ALENIRIVLIETSHSGNIGSAARAK--TGLTQLCLVSPKS-VDEQSYALSAGAENIVKNARVVDSFDEAVDDCSLVIGTSARLRHLQNTLIEPRECAEKVVAY--KGKIAIVFGRERIGLTNEELLKCHYHLNIPANPDYSSLNLA-AVQLVSYELRAFLVQNNK--KNSLSLEKNYPTTDQLAYFFDYTERIYQSLGFIQNQG----VRKLKRLYYRAKLEKNELNILNGLSAVEKRIDLTK---
2SPARKS3ilka0.5110.9394.192threading_2ALENIRIVLIETSHSGNIGSAARAK--TGLTQLCLVSPKS-VDEQSYALSAGAENIVKNARVVDSFDEAVDDCSLVIGTSARLRHLQNTLIEPRECAEKVVA--YKGKIAIVFGRERIGLTNEELLKCHYHLNIPANPDYSSLNLA-AVQLVSYELRAFLVQ--NNKKNSLSLEKNYPTTDQLAYFFDYTERIYQSLGFIQNQG----VRKLKRLYYRAKLEKNELNILNGLSAVEKRIDLTK---
3PROSPECT23ilkA0.5060.9393.297threading_3ALENIRIVLIETSHSGNIGSAARA--KTGLTQLCLVSPKS-VDEQSYALSAGAENIVKNARVVDSFDEAVDDCSLVIGTSARLRHLQNTLIEPRECAEKVVA--YKGKIAIVFGRERIGLTNEELLKCHYHLNIPANPDYSSLNLA-AVQLVSYELRAFLVQNNK--KNSLSLEKNYPTTDQLAYFFDYTERIYQSLGFIQNQG----VRKLKRLYYRAKLEKNELNILNGLSAVEKRIDLT---K
4PPA-I3ilkA0.5060.9393.091threading_4ALENIRIVLIETSHSGNIGSAARAK--TGLTQLCLVSPKS-VDEQSYALSAGAENIVKNARVVDSFDEAVDDCSLVIGTSARLRHLQNTLIEPRECAEKVVAY--KGKIAIVFGRERIGLTNEELLKCHYHLNIPANPDYSSLNLA-AVQLVSYELRAFLVQNN--KKNSLSLEKNYPTTDQLAYFFDYTERIYQSLGFIQNQG----VRKLKRLYYRAKLEKNELNILNGLSAVEKRIDLTK---
5HHPRED-l3onp_A0.3620.6185.261threading_5--IEPVFILVRPQ-GENIGAAARA-LNFGLGRLRIVDPRDGPNPKAVA-ASGAGRLLDHAGLFPTVAEAIRDCDYVFATTARGRELTKPV-TPERA-AHGRATGEGRRVGILFGPERTGLENEDVALANAIVTVPVNPEFFSLNLAQCVLLLAYEWRRQ---------------------------------------------------------------------------------------
6HHPRED-g3onp_A0.3620.6185.107threading_6--IEPVFILVRPQ-GENIGAAARA-LNFGLGRLRIVDPRDGPNPKAVA-ASGAGRLLDHAGLFPTVAEAIRDCDYVFATTARGRELTKPV-TPERA-AHGRALTGGRRVGILFGPERTGLENEDVALANAIVTVPVNPEFFSLNLAQCVLLLAYEWRRQ---------------------------------------------------------------------------------------
7SP33ilka0.5060.9394.420threading_7ALENIRIVLIETSHSGNIGSAARAK--TGLTQLCLVSPKS-VDEQSYALSAGAENIVKNARVVDSFDEAVDDCSLVIGTSARLRHLQNTLIEPRECAEKVVA--YKGKIAIVFGRERIGLTNEELLKCHYHLNIPANPDYSSLNLA-AVQLVSYELRAFLVQNNK--KNSLSLEKNYPTTDQLAYFFDYTERIYQSLGFIQNQG----VRKLKRLYYRAKLEKNELNILNGLSAVEKRIDLTK---
8SAM-T993ilkA0.5190.9395.318threading_8ALENIRIVLIETSHSGNIGSAARA--KTGLTQLCLVSP-KSVDEQSYALSAGAENIVKNARVVDSFDEAVDDCSLVIGTSARLRHLQNTLIEPRECAEKVVAY--KGKIAIVFGRERIGLTNEELLKCHYHLNIPANPDYSSLNLA-AVQLVSYELRAFLVQNNKK--NSLSLEKNYPTTDQLAYFFDYTERIYQSLGFI----QNQGVRKLKRLYYRAKLEKNELNILNG-LSAVEKRIDLTK--
9MUSTER3ilkA10.5640.6711.945threading_9ALENIRIVLIETSHSGNIGSAARAK--TGLTQLCLVSPKS-VDEQSYALSAGAENIVKNARVVDSFDEAVDDCSLVIGTSARLRHLQNTLIEPRECAEKVVAY--KGKIAIVFGRERIGLTNEELLKCHYHLNIPANPDYSSLNLA-AVQLVSYELRAFLVQNNKKNSLSL---------------------------------------------------------------------------
10SPARKS3onpa0.3310.6263.204threading_10--IEPVFILVRPQ-GENIGAAARALNF-GLGRLRIVDPRDGWPNPKAVAASGAGRLLDHAGLFPTVAEAIRDCDYVFATTARGRELTKPVTPERAAHGRALTG-EGRRVGILFGPERTGLENEDVALANAIVTVPVNPEFFSLNLAQCVLLLAYEWRRQ---------------------------------------------------------------------------------------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.674 to 1ipaA
SCOP code=c.116.1.1
TM-score=0.675 to 1ipaA
SCOP code=c.116.1.1
TM-score=0.670 to 1ipaA
SCOP code=c.116.1.1
TM-score=0.672 to 1ipaA
SCOP code=c.116.1.1
TM-score=0.673 to 1ipaA
SCOP code=c.116.1.1