Template-based Modeling Results for TTDB_ECOLI

Submitted Primary Sequence

>Length 201
MKKILTTPIKAEDLQDIRVGDVIYLTGTLVTCRDVCHRRLIELKRPIPYDLNGKAIFHAGPIVRKNGDKWEMVSVGPTTSMRMESFEREFIEQTGVKLVVGKGGMGPLTEEGCQKFKALHVIFPAGCAVLAATQVEEIEEVHWTELGMPESLWVCRVKEFGPLIVSIDTHGNNLIAENKKLFAERRDPIVEEICEHVHYIK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKKILTTPIKAEDLQDIRVGDVIYLTGTLVTCRDVCHRRLIELKRPIPYDLNGKAIFHAGPIVRKNGDKWEMVSVGPTTSMRMESFEREFIEQTGVKLVVGKGGMGPLTEEGCQKFKALHVIFPAGCAVLAATQVEEIEEVHWTELGMPESLWVCRVKEFGPLIVSIDTHGNNLIAENKKLFAERRDPIVEEICEHVHYIK
CCCCCCCCCCHHHHHHCCCCCEEEEEEEEEEEHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCEEEEECCCHHHHHHHHHCCEEEEEECCCCCCCCEEEEEEEECCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKKILTTPIKAEDLQDIRVGDVIYLTGTLVTCRDVCHRRLIELKRPIPYDLNGKAIFHAGPIVRKNGDKWEMVSVGPTTSMRMESFEREFIEQTGVKLVVGKGGMGPLTEEGCQKFKALHVIFPAGCAVLAATQVEEIEEVHWTELGMPESLWVCRVKEFGPLIVSIDTHGNNLIAENKKLFAERRDPIVEEICEHVHYIK
554222131323103303111100010100000110032014243301220311000000101343233110000011112311210320022010100002021132002003412000000010000000210120110113212111000102022000000000131110112123101321330033013213224
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKKILTTPIKAEDLQDIRVGDVIYLTGTLVTCRDVCHRRLIELKRPIPYDLNGKAIFHAGPIVRKNGDKWEMVSVGPTTSMRMESFEREFIEQTGVKLVVGKGGMGPLTEEGCQKFKALHVIFPAGCAVLAATQVEEIEEVHWTELGMPESLWVCRVKEFGPLIVSIDTHGNNLIAENKKLFAERRDPIVEEICEHVHYIK
1	MUSTER	2isbA	0.379	0.841	3.173	threading_1	VEYELRTPLVKDQILKLKVGDVVYITGEIFTARDEAHARALEEGKELPFSFDKGVVYHCGPLVKKNDE-WRVVSAGPTTSARNP-FTPKILEKVEC-GIIGKGGSEEVVEAR---GKAAYFAFTGGAGALAA-SIKKVKGVVWEDLGP-EAVWLLEVERFGPCIVAIDAHGNSLYRR------------------------
2	SPARKS	1vpja	0.381	0.836	3.648	threading_2	VEYELRTPLVKDQILKLKVGDVVYITGEIFTARDEAHARALEEGKELPFSFDKGVVYHCGPLVKKNDE-WRVVSAGPTTSARNP-FTPKILEKVEC-GIIGKGGSEEVVEA---RGKAAYFAFTGGAGALAA-SIKKVKGVVWEDLGP-EAVWLLEVERFGPCIVAIDAHGNSLYR-------------------------
3	PROSPECT2	1vpjA	0.381	0.836	3.465	threading_3	VEYELRTPLVKDQILKLKVGDVVYITGEIFTARDEAHARALEWGKELPFSFDKGVVYHCGPLVKKNDE-WRVVSAGPTTSARNP-FTPKILEKVEC-GIIGKGGSEEVVEA---RGKAAYFAFTGGAGALAA-SIKKVKGVVWEDLGP-EAVWLLEVERFGPCIVAIDAHGNSLY-------------------------R
4	PPA-I	2isbA	0.379	0.841	5.949	threading_4	VEYELRTPLVKDQILKLKVGDVVYITGEIFTARDEAHARALEWGKELPFSFDKGVVYHCGPLVKK-NDEWRVVSAGPTTSARNP-FTPKILEKVEC-GIIGKGGSEEVVEAR---GKAAYFAFTGGAGALAA-SIKKVKGVVWEDLGP-EAVWLLEVERFGPCIVAIDAHGNSLYRR------------------------
5	HHPRED-l	2isb_A	0.387	0.836	11.592	threading_5	-EYELRTPLVKDQILKLKVGDVVYITGEIFTARDEAHARALEEGKELPFSFDKGVVYHCGPLVKKND-EWRVVSAGPTTSAR-NPFTPKILEKVEC-GIIGKGG-SEEVVEA-R-GKAAYFAFTGGAGALAA-SIKKVKGVVWEDLG-PEAVWLLEVERFGPCIVAIDAHGNSLYRR------------------------
6	HHPRED-g	2isb_A	0.387	0.836	9.562	threading_6	-EYELRTPLVKDQILKLKVGDVVYITGEIFTARDEAHARALEEGKELPFSFDKGVVYHCGPLVKKND-EWRVVSAGPTTSAR-NPFTPKILEKVEC-GIIGKGG-SEEVVEA-R-GKAAYFAFTGGAGALAA-SIKKVKGVVWEDLG-PEAVWLLEVERFGPCIVAIDAHGNSLYRR------------------------
7	SP3	1vpja	0.381	0.836	1.960	threading_7	VEYELRTPLVKDQILKLKVGDVVYITGEIFTARDEAHARALEWGKELPFSFDKGVVYHCGPLVKKNDE-WRVVSAGPTTSARNP-FTPKILEKVEC-GIIGKGGSEEVVEA---RGKAAYFAFTGGAGALAA-SIKKVKGVVWEDLGP-EAVWLLEVERFGPCIVAIDAHGNSLYR-------------------------
8	SAM-T99	2isbA	0.393	0.836	7.517	threading_8	VEYELRTPLVKDQILKLKVGDVVYITGEIFTARDEAHARALEEGKELPFSFDKGVVYHCGPLVKKN-DEWRVVSAGPTTSAR-NPFTPKILEKVEC-GIIGKGGSEEVVE---ARGKAAYFAFTGGAGALAA--IKKVKGVVWEDLG-PEAVWLLEVERFGPCIVAIDAHGNSLYRR------------------------
9	MUSTER	3dp9C2	0.176	0.736	0.565	threading_9	---VINT-FDA----SLNVGDVVISSEVRHHDADVT-----AFGYEIGQMAGQPAAFKA--------------------DEKLMTVAEQALAQLPVRGLICTGDCTAERQQFIRQHFPSVVAVEMEASAIAQTC---------HQFKVP-FVVVRAISDV------ADKESPLSFEEFLPLAAKSSSAMVLKMVELL----
10	SPARKS	3ec2a	0.147	0.811	0.622	threading_10	-----AKRYWNANLDTYHPKNV---------SQNRALLTIRVFVHNFNPE-EGKGLTFVGSP-----------GVGKTHL--AVATLKAIYEKKGIRGYFF---DTKDLIFRLKHLD-------EGKDTKFLKTVLNSPVLVLDDLGSEELISYIRYNNLKSTIITTNYSLQRSSVRISADLASRLENVVSKIYEELLVIK

Predicted Tertiary Structure


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TM-score=0.889 to 2isbA SCOP code=c.8.9.1	TM-score=0.889 to 2isbA SCOP code=c.8.9.1	TM-score=0.891 to 2isbA SCOP code=c.8.9.1	TM-score=0.886 to 2isbA SCOP code=c.8.9.1	TM-score=0.892 to 2isbA SCOP code=c.8.9.1