Template-based Modeling Results for WCAA_ECOLI

Submitted Primary Sequence

>Length 279
MKNNPLISIYMPTWNRQQLAIRAIKSVLRQDYSNWEMIIVDDCSTSWEQLQQYVTALNDPRITYIHNDINSGACAVRNQAIMLAQGEYITGIDDDDEWTPNRLSVFLAHKQQLVTHAFLYANDYVCQGEVYSQPASLPLYPKSPYSRRLFYKRNIIGNQVFTWAWRFKECLFDTELKAAQDYDIFLRMVVEYGEPWKVEEATQILHINHGEMQITSSPKKFSGYFHFYRKHKDKFDRASKKYQLFTLYQIRNKRMTWRTLLTLLSVRNGKRLADGIRGR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKNNPLISIYMPTWNRQQLAIRAIKSVLRQDYSNWEMIIVDDCSTSWEQLQQYVTALNDPRITYIHNDINSGACAVRNQAIMLAQGEYITGIDDDDEWTPNRLSVFLAHKQQLVTHAFLYANDYVCQGEVYSQPASLPLYPKSPYSRRLFYKRNIIGNQVFTWAWRFKECLFDTELKAAQDYDIFLRMVVEYGEPWKVEEATQILHINHGEMQITSSPKKFSGYFHFYRKHKDKFDRASKKYQLFTLYQIRNKRMTWRTLLTLLSVRNGKRLADGIRGR
CCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCHHCCCHHHHHHHHHHHHHCCCEEEEEEEEEEECCCEEECCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKNNPLISIYMPTWNRQQLAIRAIKSVLRQDYSNWEMIIVDDCSTSWEQLQQYVTALNDPRITYIHNDINSGACAVRNQAIMLAQGEYITGIDDDDEWTPNRLSVFLAHKQQLVTHAFLYANDYVCQGEVYSQPASLPLYPKSPYSRRLFYKRNIIGNQVFTWAWRFKECLFDTELKAAQDYDIFLRMVVEYGEPWKVEEATQILHINHGEMQITSSPKKFSGYFHFYRKHKDKFDRASKKYQLFTLYQIRNKRMTWRTLLTLLSVRNGKRLADGIRGR
555311000000011223002200300053203101000001012123210011112323200001132221001011100120211000001111201221001002102412210000000100223112232222222322101100132001002000001112311122303101001000200220110010221000000122323222122101001200220131023013101101011011111002000000103213310211334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKNNPLISIYMPTWNRQQLAIRAIKSVLRQDYSNWEMIIVDDCSTSWEQLQQYVTALNDPRITYIHNDINSGACAVRNQAIMLAQGEYITGIDDDDEWTPNRLSVFLAHKQQLVTHAFLYANDYVCQGEVYSQPASLPLYPKSPYSRRLFYKRNIIGNQVFTWAWRFKECLFDTELKAAQDYDIFLRMVVEYGEPWKVEEATQILHINHGEMQITSSPKKFSGYFHFYRKHKDKFDRASKKYQLFTLYQIRNKRMTWRTLLTLLSVRNGKRLADGIRGR
1	MUSTER	2z86C2	0.228	0.910	2.350	threading_1	LKRVPLVSIYIPAYNCSKYIVRCVESALNQTITDLEVCICDDGSTDDTLRILQEHYANHPRVRFISQK-NKGIGSASNTAVRLCRGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNRNIDREGNLIS---NGYNWPIYSREKLTSAMICHHFMFTARAWNLTEGFNESISNAVDYDMYLKLSEVGP-FKHINKICYNRVLHGENTSIKKLDIQKENHFKVVNESLSRLGIKKYKYSPLTNLN-ECRKYTWEKI-------------------
2	SPARKS	2z86a	0.220	0.896	3.573	threading_2	LKRVPLVSIYIPAYNCSKYIVRCVESALNQTITDLEVCICDDGSTDDTLRILQEHYANHPRVRFISQK-NKGIGSASNTAVRLCRGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNRNIDREGNLIS---NGYNWPIYSREKLTSAMICHHFMFTARAWNLTEGFNESISNAVDYDMYLKLSEVGP-FKHINKICYNRVLHSIKKLDIQKENHFKVVNESLSRLGIKKYKYSPLTNLNECRKYTWEKI------------------------
3	PROSPECT2	2z86A2	0.208	0.896	3.161	threading_3	LKRVPLVSIYIPAYNCSKYIVRCVESALNQTITDLEVCICDDGSTDDTLRILQEHYANHPRVRFISQK-NKGIGSASNTAVRLCRGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNRNIDRE---GNLISNGYNWPIYSREKLTSAMICHHFRMFTARAWNLEGFNESISNAVDYDMYLKLSEVGP-FKHINKICYNRVLHSIKKL----------------------DIQKENHFKVVNESLSRLGIKKYKYSPLTNLNECRKYT--WEKI
4	PPA-I	1h7qA	0.214	0.821	3.278	threading_4	----PKVSVIMTSYNKSDYVAKSISSILSQTFSDFELFIMDDNSNEETLNVIRPF-LNDNRVRFYQSDIKTRYAALINQAIEMAEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNDIVKETVRPAAQVTWNAPCAIDHCSVMHRYSVLEKVKEKFGSYSPAFYRIGDARFFWRVNHFYP-FYPLDEELDLNYITDNEFVRNLPPQRNCRELRESLKKLGMG--------------------------------------------
5	HHPRED-l	1xhb_A	0.157	0.957	4.089	threading_5	PDNLPTTSVVIVFHNEASTLLRTVHSVINRSPRHMEIVLVDDASERDFLRPLESYVKKKVPVHVIRMEQRSGLIRARLKGAAVSRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYMAGSWYPVPQREMDRRKVRTPTMGGLFSIDRDYFQEIGTYDAGMDGGENLEISFRIWQCGGTLEIVTCSHVGHVF----------QIINKNNRRLAEVWMDEFKNFFYIISPG-VTKVISSRLGLRRKLQCKPFSWYLENIPDSQG-
6	HHPRED-g	2z86_A	0.228	0.896	3.713	threading_6	LKRVPLVSIYIPAYNCSKYIVRCVESALNQTITDLEVCICDDGSTDDTLRILQEHYANHPRVRFIS-QKNKGIGSASNTAVRLCRGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNRNIDREGNLIS---NGYNWPIYSREKLTSAMIHHFRMFTARAWNLTEGFNESISNAVDYDMYLKLSEVG-PFKHINKICYNRVLH----SIKKLDIQKENHFKVVNESLSRLGIKKYKYSPLTNLNECRKYTWEKI--------------------
7	SP3	3bcva	0.153	0.677	3.425	threading_7	I---PKVSVIVPIYNVEKYLDQCVQALLAQTLSDIEIILIDDESPDNCPKICDDYAAQYPNIKVIH-KKNAGLG-ACNSGLDVATGEYVAFCDSDDYVDSDYTYNVAQKYTCD----AVFTFKLYKNKNEIHTLLKDLIASDPYAREERAIQ-VSAKVVLYRRNLIEKKHFVSERILPSEDLIFNVDVLANSNIVCVLP--------------------------------------------------------------------------------
8	SAM-T99	2z86C2	0.233	0.832	5.458	threading_8	---VPLVSIYIPAYNCSKYIVRCVESALNQTITDLEVCICDDGSTDD--TLRILQEHNHPRVRFISQK-NKGIGSASNTAVRLCRGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNRNIDREG---NLISNGYNWPIYSREKLTSAMICHHFMFTARAWNLTEGFNESISNAVDYDMYLKLSEVG-PFKHINKICYNRVLHGENTSIKKLDIQKENHFKVVNESLSRLGIKKYKY-------------------------------------
9	MUSTER	2z86C	0.228	0.910	2.294	threading_9	LKRVPLVSIYIPAYNCSKYIVRCVESALNQTITDLEVCICDDGSTDDTLRILQEHYANHPRVRFISQK-NKGIGSASNTAVRLCRGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNRNIDREGNLIS---NGYNWPIYSREKLTSAMICHHFMFTARAWNLTEGFNESISNAVDYDMYLKLSEVG-PFKHINKICYNRVLHGENTSIKKLDIQKENHFKVVNESLSRLGIKKYKYSPLTNLN-ECRKYTWEKI-------------------
10	SPARKS	3bcva	0.179	0.681	3.378	threading_10	--LIPKVSVIVPIYNVEKYLDQCVQALLAQTLSDIEIILIDDESPDNCPKICDDYAAQYPNIKVIHKK-NAGLG-ACNSGLDVATGEYVAFCDSDDYVDSDYTYNVAQKYTCD----AVFTFKLYKNKN-EIHTLLKDLIASDPYAREERAIQVSAKVVLYRRNLIEKKHLVSERILPSEDLIFNVDVLANSNIVCVLP--------------------------------------------------------------------------------

Predicted Tertiary Structure


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TM-score=0.727 to 1h7qA SCOP code=c.68.1.1	TM-score=0.727 to 1h7qA SCOP code=c.68.1.1	TM-score=0.723 to 1h7qA SCOP code=c.68.1.1	TM-score=0.727 to 1h7qA SCOP code=c.68.1.1	TM-score=0.834 to 1h7qA SCOP code=c.68.1.1