Template-based Modeling Results for YABI_ECOLI


  Submitted Primary Sequence

>Length 254
MQALLEHFITQSTVYSLMAVVLVAFLESLALVGLILPGTVLMAGLGALIGSGELSFWHAWLAGIIGCLMGDWISFWLGWRFKKPLHRWSFLKKNKALLDKTEHALHQHSMFTILVGRFVGPTRPLVPMVAGMLDLPVAKFITPNIIGCLLWPPFYFLPGILAGAAIDIPAGMQSGEFKWLLLATAVFLWVGGWLCWRLWRSGKATDRLSHYLSRGRLLWLTPLISAIGVVALVVLIRHPLMPVYIDILRKVVGV
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MQALLEHFITQSTVYSLMAVVLVAFLESLALVGLILPGTVLMAGLGALIGSGELSFWHAWLAGIIGCLMGDWISFWLGWRFKKPLHRWSFLKKNKALLDKTEHALHQHSMFTILVGRFVGPTRPLVPMVAGMLDLPVAKFITPNIIGCLLWPPFYFLPGILAGAAIDIPAGMQSGEFKWLLLATAVFLWVGGWLCWRLWRSGKATDRLSHYLSRGRLLWLTPLISAIGVVALVVLIRHPLMPVYIDILRKVVGV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MQALLEHFITQSTVYSLMAVVLVAFLESLALVGLILPGTVLMAGLGALIGSGELSFWHAWLAGIIGCLMGDWISFWLGWRFKKPLHRWSFLKKNKALLDKTEHALHQHSMFTILVGRFVGPTRPLVPMVAGMLDLPVAKFITPNIIGCLLWPPFYFLPGILAGAAIDIPAGMQSGEFKWLLLATAVFLWVGGWLCWRLWRSGKATDRLSHYLSRGRLLWLTPLISAIGVVALVVLIRHPLMPVYIDILRKVVGV
35210220020010000000000000110111001000000000000000112010000000000000000000000012022101321123223210220120034111000000100000100000000002010010000000000000000000000002003001001101010000000000000000012113223213212221020110100000000000000001211101001100121125
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMQALLEHFITQSTVYSLMAVVLVAFLESLALVGLILPGTVLMAGLGALIGSGELSFWHAWLAGIIGCLMGDWISFWLGWRFKKPLHRWSFLKKNKALLDKTEHALHQHSMFTILVGRFVGPTRPLVPMVAGMLDLPVAKFITPNIIGCLLWPPFYFLPGILAGAAIDIPAGMQSGEFKWLLLATAVFLWVGGWLCWRLWRSGKATDRLSHYLSRGRLLWLTPLISAIGVVALVVLIRHPLMPVYIDILRKVVGV
1PROSPECT22bkuB20.0770.9721.359threading_1VMDKLGQTMSLQELQSNILTVLAAVIRKSPSSVEPVADMLMGLFFRLLEKKDSAFIDVFYAISALAASLGKGFEKYLETFSPYKALNQVDSPVSITAVGFIADISNSLE------EDFRRYSDAMMNVLAQMISNPNARRELKPAV-LSVFGDIASNIGADFIPYLNDIMALCVATLEALDYQIKVLEAVLDAYVGIVAGLHDKPEALFPYVGTIFQFIAQVAAAVGLIGDIAAMFPDGSIKQFREQQKRQLSL
2PPA-I3g61A10.0810.9721.039threading_2LAAIIHGVALPLMMLIFGDMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEEMTTYAYYYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVHDV-----GELNTRLTDDVSKINEGIGDKIGMFFQAMATFFGGFIIGFTRIGQVLTVFFSVLIGAFSVGQASPNIEAFANARGAAYEVFKIIDNKPSIDSFSGW--QLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKI
3HHPRED-g3aqp_A0.1050.5981.087threading_3VGPAIGEVMAVLVGLGLILLYVAFRFDWGVASILAVAHDVAIVAGMYSLLGLEFSIPTIAALLTI---VGYSINDSIVVRIRENQKLLR--HLPAELVNRS---INQT------------LSRTVM--------------TSLTTLLPI-------LALLFLGG--SVLRDF----ALAIFVGIFVYVVSALVVAWKNR-------------------------------------------------------
4PROSPECT21r2fA0.0760.8821.357threading_4ISNDIPAWQTLSAAEQQLTIRVFTGLTLL---------DTIQNIAGAPSLMADAITPHEEAVLSNISFMEAVHARSYSSIF--------STLCQTKEVDAAYAWSEEN----------PPLQRKAQIILAHYVSDEPLKKKIASVFLESFLFYSGFWLPMYFSSRGKLTNTADLIRL---IIRDEAVHGYYIGYKYQIALQKLSAIEREELKLFALDLLMELYDNEIRYTEALYAETGWVNDVKAFLCYAALSP
5PPA-I3zuxA0.1050.8621.021threading_5--NILSKISSFIGKTFSLWAALFAAAAFFATFKWAGPYIPWLLGIIMFGMGLTLKPKVVIIGVIAQFAIMPATAWCLSKLLN----------LPAEIAVGVILVGCCPGG-------------TASNVMTYLARGNVALSVAVTSVSTLTSPLLTPAIFLMLAGEMLEIQAAGMLMSIVKMVLLPIVLGLIVHKVLG-----SKTEKLT-----DALPLVSVAAIVLIIGAVVGASKGKIMESGLLIFAVVVLH
6PROSPECT23kb9A0.0941.0001.349threading_6LQETTRTWLLEKADKVEEYADGLCYTDLMAGYYLGAPDEVLQAIADYSAWFFVWDDRHDRDIVHGRAGAWRRLRGLLHTALDSPGDHLHHEDTLVAGFADSVRRLYAFLPATWFARHFHTVIEAYDREFHNRTIVPGVEEYLELRRLTFAHWIWTDLLEPSSGCELPDAVRKHPAYRRAALLSQEFAAWYNDLCSLPKEIAGDEIGEVRRRVEECITEFLAVERDALRFADELGKELSGAVRANVGNMRNWFNN
7PROSPECT21kgna0.0910.8621.265threading_7VSNDIQSWNKMTPQEQLATMRVFTGLTLLD-------TIQGTVGAISLLPDAETMHEEAVYIAFMESVHAKSYSNIFMTLA------------STPQINEAFRWSEEN-----------ENLQRKAKIIMSYYNGDLKKKVASTLLESFLFYSGFYLPMYLSSRAKLTNTADIIR----LIIRDESVHGYYIGYKYQQGVKKLSEAEQEEYKAYTFDLMYDLYENEIEYTE-DIYDDLGWTEDVKRFLRYNANS
8PROSPECT21ezfa0.0810.9211.237threading_8NSKTCYKYLNQTSRSFAAVIQ-------------ALDGEMRNAVCIFYL-------VLRALDTLEVEKKVPLLHNFHSFLYQPDWRFMESKEKDRQVLEDFPTISLERNLAEKYQTVIADICRRMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLSRLFSASEFEDPLVGEDTERANSMGLFLQKTNIIRDYLEDQQGGRKLGDFAKPENIDLAVQCLNELITNAPDVITYLSRLRNQSVFNFCAIPQVQN
9MUSTER3zuxA0.1150.8580.764threading_9LSKISSFIGKTFSLWAALFAAAAFFADTFKWAGPYIP--IIMFGMGLTLKPSDFHPKVVIIGVIAQFAIMPATAWCLSKLLN----------------------LPAEIAVGVILVGCCPG--TASNVMTYLARGNVALSVAVTSVSTLTSPLLTPAIFLMLAGEM---LEIQAAGMLMSIVKMVLLPIVLGLIVHKVLG--SKTEKL-----TDALPLVSVAAIVLIIGAVVGASKGKIMESGLLIFAVVVLH
10SPARKS2xwub0.0970.9760.804threading_10LSNLYDKLGRLLTSYSWQHTEALLYGFQSIAET--IDVNYSDVVPGLIGLIPRISISNVQLADTVMFTIGALSEWLAPVMINPLVLHALGNPELSVSSVSTLKKICRECKYDLYAANIVAVSQDVLM--KQIHK-TSQCMWLMQALGFLLVEEILKNLHSLISPYIQQLEKLNPSNKLAIVHILGLLSNLFTPVVVVLQQVFQLIQKVLSWLNDAQVVEAVCAIFEKSVKTLLDDFA-PMVPQLCEMLGRMYST

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.506 to 1j30A
SCOP code=a.25.1.1
TM-score=0.770 to 3ea5B
SCOP code=a.118.1.1
TM-score=0.506 to 1j30A
SCOP code=a.25.1.1
TM-score=0.428 to 2hbkA
SCOP code=a.60.8.4
TM-score=0.798 to 1uzrB
SCOP code=a.25.1.2