Template-based Modeling Results for YADC_ECOLI

Submitted Primary Sequence

>Length 412
MKTIFRYILFLALYSCCNTVSAYTSFIVGNNAGVDNYRGPSTAAQMTFNYTSTASNLVFYKPTQLGPTGVKMYWSYLDTGTGGGILYCNTSGRANPGPITIENAMVYSGKDYGGHKLFNTSVPGLYYTMLISRVWSAYDTITDIQSPGIYIGDPSNQEFFFSVTDSDLQTKGCNKADDYDKFWAIGGIVHNITVEFYTDTNFDPTLNQQVQLSSSSNYLYSFKAYSPGTKVVDHSNHIYVNFTLNNVKLTLPTCFTSILTGPSVNGSTVRMGEYSSGTIKNGASPVPFDISLQNCIRVRNIETKLVTGKVGTQNTQLLGNTLTGSTAAKGVGVLIEGLATSKNPLMTLKPNDTNSVYIDYETEDDTSDGVYPNQGNGTSQPLHFQATLKQDGNIAIEPGEFKATSTFQVTYP
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKTIFRYILFLALYSCCNTVSAYTSFIVGNNAGVDNYRGPSTAAQMTFNYTSTASNLVFYKPTQLGPTGVKMYWSYLDTGTGGGILYCNTSGRANPGPITIENAMVYSGKDYGGHKLFNTSVPGLYYTMLISRVWSAYDTITDIQSPGIYIGDPSNQEFFFSVTDSDLQTKGCNKADDYDKFWAIGGIVHNITVEFYTDTNFDPTLNQQVQLSSSSNYLYSFKAYSPGTKVVDHSNHIYVNFTLNNVKLTLPTCFTSILTGPSVNGSTVRMGEYSSGTIKNGASPVPFDISLQNCIRVRNIETKLVTGKVGTQNTQLLGNTLTGSTAAKGVGVLIEGLATSKNPLMTLKPNDTNSVYIDYETEDDTSDGVYPNQGNGTSQPLHFQATLKQDGNIAIEPGEFKATSTFQVTYP
CHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCEEEECCCCCCCEEEECCCCCCCCCCCCCEEEECCCCCCCCCCEEEHHCCCCCCCCCCCCEEEECCCCCEEEEEEEEECCCCCCEEECCCCCCCEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEECCEEEEEEEEEEECCCCCCCCCCEEEEECCCCCCCCEEECCCCCCCCCCCEEEEEEECCCCEEEECCEEEEEECCCCCCCCCEEECCCCCHHHHHCCCEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCEEEECCCCCCCCCCEECCCCCCCCEEEEEEEEEECCCCCEEECCCCEEEEEEEEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKTIFRYILFLALYSCCNTVSAYTSFIVGNNAGVDNYRGPSTAAQMTFNYTSTASNLVFYKPTQLGPTGVKMYWSYLDTGTGGGILYCNTSGRANPGPITIENAMVYSGKDYGGHKLFNTSVPGLYYTMLISRVWSAYDTITDIQSPGIYIGDPSNQEFFFSVTDSDLQTKGCNKADDYDKFWAIGGIVHNITVEFYTDTNFDPTLNQQVQLSSSSNYLYSFKAYSPGTKVVDHSNHIYVNFTLNNVKLTLPTCFTSILTGPSVNGSTVRMGEYSSGTIKNGASPVPFDISLQNCIRVRNIETKLVTGKVGTQNTQLLGNTLTGSTAAKGVGVLIEGLATSKNPLMTLKPNDTNSVYIDYETEDDTSDGVYPNQGNGTSQPLHFQATLKQDGNIAIEPGEFKATSTFQVTYP
4330010000000000010011200000021111231401120010101221111100002223212000212112022121200000132132320000012001211332202200101020000000001011112101211111011022122101011223213231123222232000011000101010001131312222201011133211101011111212321000100011220201101000001313223111020131111103421110201010320232320212011232224221000021212221300000021222242111002232221111013232122300112322121110100010233232102113020101020225
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKTIFRYILFLALYSCCNTVSAYTSFIVGNNAGVDNYRGPSTAAQMTFNYTSTASNLVFYKPTQLGPTGVKMYWSYLDTGTGGGILYCNTSGRANPGPITIENAMVYSGKDYGGHKLFNTSVPGLYYTMLISRVWSAYDTITDIQSPGIYIGDPSNQEFFFSVTDSDLQTKGCNKADDYDKFWAIGGIVHNITVEFYTDTNFDPTLNQQVQLSSSSNYLYSFKAYSPGTKVVDHSNHIYVNFTLNNVKLTLPTCFTSILTGPSVNGSTVRMGEYSSGTIKNGASPVPFDISLQNCIRVRNIETKLVTGKVGTQNTQLLGNTLTGSTAAKGVGVLIEGLATSKNPLMTLKPNDTNSVYIDYETEDDTSDGVYPNQGNGTSQPLHFQATLKQDGNIAIEPGEFKATSTFQVTYP
1	SPARKS	3jwne	0.212	0.367	2.434	threading_1	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ADSTITI-----RGYVRDNGCSVAA----ESTNFTVDLMENAAKQFNNITPVVPFRILLSPCGNAVS-AVKVGFTGVADSHNANLLALENTVSAAAGLGIQLLNEQQNQ-----IPLNAPSS------------ALSWTTLTPGKPNTLNFYARLMAT-QVPVTAGHINATATFTLEYQ
2	PROSPECT2	1flga	0.087	0.973	1.699	threading_2	KDVTWEDIANDDKTTGDVLQYGMGSYSFGDEKQRGQESQATGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGADHGAGYTMTGAPTIVKDGKTGKTGEEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVKWFYQHTPNDNNELVLFDYKAKDGKIVKATAHADRNGVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFL-----GGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYT------KGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNTGDGYFKAFDAKFQTGSGIVSPPAQGGSFWVFKLPSW
3	PPA-I	2j2zB	0.184	0.342	1.003	threading_3	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RAAFHGEVVRPACTLAM----EDAWQIIDMGETPVRDLQNGGPERKFSLRLRNCELFSDSRIRVTFDGVRGETP----DKFNLSGQAKGINLQIADVRGN-----IARAGKVMP----------------AIPLTGNEEALDYTLRIVRNGK-KLEAGNYFAVLGFRVDYE
4	HHPRED-g	3jwn_H	0.152	0.670	3.358	threading_4	-------------------------FACKTANGTAIPIG-GGSANVYVNLAPAVN---------VGQNL------VVDLSTQ---IFCHNDYPET---I-TDYVTLQRGS------AYGGVLSSFSGTV----KYNGS-------------------SYPFPTTSET-P-----------RVVYNSRTDKPWPVALYLTPVSS-AG----GVAIKAGLIAVLILRQTNNYN-SDDFQFVWNIANNDVVVPTGGCDV------SARDVTVTLPDYPG--------SVPIPLTVY-CAKS--QNLGYYLSGTTADGNSIFTNTA-SFSPAQGVGVQLTR-N-----GTIIPANNTVSLGA----------------VGTSAVSLGLTANYARTG-GQVTAGNVQSIIGVTFVYQ
5	HHPRED-l	3bfq_G	0.133	0.311	3.685	threading_5	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AKPCTVS---TT---NATVDLGDLYSFSLMSASAWHDVALELTNCPVGT-SRVTASFSGAADST-GY----YKNQGTAQNIQLELQDDSGNTLNTG-----ATKT---------------VQVDDSSQSAHFPLQVRALTVNG-GATQGTIQAVISITYTY-
6	SP3	3jwne	0.205	0.367	2.187	threading_6	-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ADSTITI-----RGYVRDNGCSVAA----ESTNFTVDLMENAAKQFNNITPVVPFRILLSPCGNAVS-AVKVGFTGVADSHNANLLALENTVSAAAGLGIQLLNEQQNQ-----IPLNAPSSALSWTTLTPGK------------PNTLNFYARLMATQ-VPVTAGHINATATFTLEYQ
7	PROSPECT2	3kyaA	0.084	0.949	1.696	threading_7	VETG--------------AFDPSKPVAISDFTPKEGGAYQKSTYVYCFVPSGAFSGEIEITVGEGENAVTTTASTTFSYEKKVVGTLCGYRNNRDDQGWRFDGPEGVKCCGFSDNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYIVAIDYDGKGDESPSVYIIKRNADGTFDD-----RSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHINNHYFRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGQGVFVKNPDYTGEEERKVTPEGRGASTSLADGNQWGTDDGDLREVARFRDVSGL--VYDDVKEFYVHDQVGHTIRTISEQEE
8	SAM-T99	2jmrA	0.230	0.359	3.983	threading_8	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------STIT---IRGYVRDNGCSVAAESTN----FTVDLMENAAKQFNIGTTPVPFRILLSPCGNAVS-AVKVGFTGADSHNANLLALENT-VSAASGLGIQLLNEQQNQ-----IPLNAPSSALSWTT------------LTPGKPNTLNFYARLMATQ-VPVTAGHINATATFTLEYN
9	SPARKS	1pdkb	0.220	0.342	2.288	threading_9	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLDRPCHVS----GDSLNKHVVFKTRASRDFWYPSPTESFVIRLENCHATAGKIVTLTFKGTEEAALP--GHLKVTGVNAGRLGIALLDTDGSS----LLKPGT-------------SHNKGQGEKVTGNSLELPFGAYVVATRTKSVVPGDYEATATFELTYR
10	PROSPECT2	1eut_	0.067	0.985	1.683	threading_10	GEPLYTLASYDGRPTGIDAPGPNSILQRRSTDGGRTWGEQFSDPSYLVDRETGTIFNFHVYSQRQGFAGSRPGTDPADPNVLHANVATSTDGGLTWSHRTITADITPDPGWRAGRLIQINAAGAFQAVSVYSDDHGRGEAVGVGMDENKTVELSDGRVLLNSRDSARSGYVSTDGGHSYGPVTIDRDLPDPTNNASIIRAFPDAPAGSLFSNAASQTSRSQGTIRMSCDDGQTWPVSKVFQPGSMSYST------LTALPDGTEPGTGIRYANFNLAWLGGICAPFTIPDVALEPGQQVTVPVAVTNQSGIAVPKPSLQLDASMPGRQAKGQVTITVPAGTTPGRYRVIDGNPSTFWHTEWSRADAPGYYTRRQNSANEQVADYEIYTSLNGTTSGRFTTSLAPQRAVFPQR

Predicted Tertiary Structure


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TM-score=0.784 to 1klfP SCOP code=b.2.3.2	TM-score=0.528 to 1klfP SCOP code=b.2.3.2	TM-score=0.754 to 1flgA SCOP code=b.70.1.1	TM-score=0.585 to 2j2zB SCOP code=b.2.3.2	TM-score=0.574 to 1klfP SCOP code=b.2.3.2