Template-based Modeling Results for YAEQ_ECOLI

Submitted Primary Sequence

>Length 181
MALKATIYKATVNVADLDRNQFLDASLTLARHPSETQERMMLRLLAWLKYADERLQFTRGLCADDEPEAWLRNDHLGIDLWIELGLPDERRIKKACTQAAEVALFTYNSRAAQIWWQQNQSKCVQFANLSVWYLDDEQLAKVSAFADRTMTLQATIQDGVIWLSDDKNNLEVNLTAWQQPS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MALKATIYKATVNVADLDRNQFLDASLTLARHPSETQERMMLRLLAWLKYADERLQFTRGLCADDEPEAWLRNDHLGIDLWIELGLPDERRIKKACTQAAEVALFTYNSRAAQIWWQQNQSKCVQFANLSVWYLDDEQLAKVSAFADRTMTLQATIQDGVIWLSDDKNNLEVNLTAWQQPS
CCCCCEEEEEEEEEEECCCCCCCHHHEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCHHHHCCCCCCCEEEEEECCCCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHCCCEEEEEEECCEEEEEECCCEEEEEEEECCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MALKATIYKATVNVADLDRNQFLDASLTLARHPSETQERMMLRLLAWLKYADERLQFTRGLCADDEPEAWLRNDHLGIDLWIELGLPDERRIKKACTQAAEVALFTYNSRAAQIWWQQNQSKCVQFANLSVWYLDDEQLAKVSAFADRTMTLQATIQDGVIWLSDDKNNLEVNLTAWQQPS
5424111010101000012211031100001112222220001000001102330310221123310301332232101000101213333023003402200000021200210022013202412202001023310220011043111010002212000113422010111214446
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MALKATIYKATVNVADLDRNQFLDASLTLARHPSETQERMMLRLLAWLKYADERLQFTRGLCADDEPEAWLRNDHLGIDLWIELGLPDERRIKKACTQAAEVALFTYNSRAAQIWWQQNQSKCVQFANLSVWYLDDEQLAKVSAFADRTMTLQATIQDGVIWLSDDKNNLEVNLTAWQQPS
1	MUSTER	3c0uB	0.989	0.972	4.388	threading_1	HALKATIYKATVNVADLDRNQFLDASLTLARHPSETQER--LRLLAWLKYADERLQFTRGLC-DDEPEAWLRNDHLGIDLWIELGLPDERRIKKACTQAAEVALFTYNSRAAQIWWQQNQSKCVQFANLSVWYLDDEQLAKVSAFADRTT-LQATIQDGVIWLSDDKNNLEVNLTAWQQP-
2	SPARKS	3c0ua	0.977	0.956	6.157	threading_2	HALKATIYKATVNVADLDRNQFLDASLTLARHPSETQERL--RLLAWLKYADERLQFTRD----DEPEAWLRNDHLGIDLWIELGLPDERRIKKACTQAAEVALFTYNSRAAQIWWQQNQSKCVQFANLSVWYLDDEQLAKVSAFADRTT-LQATIQDGVIWLSDDKNNLEVNLTAWQQP-
3	PROSPECT2	3c0uA	0.977	0.956	3.706	threading_3	HALKATIYKATVNVADLDRNQFLDASLTLARHPSETQERL--RLLAWLKYADERLQFTRD----DEPEAWLRNDHLGIDLWIELGLPDERRIKKACTQAAEVALFTYNSRAAQIWWQQNQSKCVQFANLSVWYLDDEQLAKVSAFADRTT-LQATIQDGVIWLSDDKNNLEVNLTAWQQP-
4	PPA-I	3c0uB	0.983	0.972	8.238	threading_4	HALKATIYKATVNVADLDRNQFLDASLTLARHPSETQER--LRLLAWLKYADERLQFTRGLCD-DEPEAWLRNDHLGIDLWIELGLPDERRIKKACTQAAEVALFTYNSRAAQIWWQQNQSKCVQFANLSVWYLDDEQLAKVSAFADRTT-LQATIQDGVIWLSDDKNNLEVNLTAWQQP-
5	HHPRED-l	3c0u_A	0.994	0.956	8.152	threading_5	HALKATIYKATVNVADLDRNQFLDASLTLARHPSETQER--LRLLAWLKYADERLQFTR----DDEPEAWLRNDHLGIDLWIELGLPDERRIKKACTQAAEVALFTYNSRAAQIWWQQNQSKCVQFANLSVWYLDDEQLAKVSAFADRT-TLQATIQDGVIWLSDDKNNLEVNLTAWQQP-
6	HHPRED-g	3c0u_A	0.994	0.956	6.835	threading_6	HALKATIYKATVNVADLDRNQFLDASLTLARHPSETQER--LRLLAWLKYADERLQFTR----DDEPEAWLRNDHLGIDLWIELGLPDERRIKKACTQAAEVALFTYNSRAAQIWWQQNQSKCVQFANLSVWYLDDEQLAKVSAFADRT-TLQATIQDGVIWLSDDKNNLEVNLTAWQQP-
7	SP3	3c0ua	0.977	0.956	5.766	threading_7	HALKATIYKATVNVADLDRNQFLDASLTLARHPSETQERL--RLLAWLKYADERLQFTRD----DEPEAWLRNDHLGIDLWIELGLPDERRIKKACTQAAEVALFTYNSRAAQIWWQQNQSKCVQFANLSVWYLDDEQLAKVSAFADRTT-LQATIQDGVIWLSDDKNNLEVNLTAWQQP-
8	SAM-T99	3c0uB	0.977	0.961	6.584	threading_8	HALKATIYKATVNVADLDRNQFLDASLTLARHPSETQERL--RLLAWLKYADERLQFTRGLCD-DEPEAWLRNDHLGIDLWIELGLPDERRIKKACTQAAEVALFTYNSRAAQIWWQQNQSKCVQFANLSVWYLDDEQLAKVSAFADRTT-LQATIQDGVIWLSDDKNNLEVNLTAWQ---
9	MUSTER	2ot9A	0.303	0.967	4.086	threading_9	-AQPSTTYKFELNLTDLDRGVYESVKQTIARHPSETEER-TVRLLAYAFWYNEQLAFGRGLSDVDEPALWEKSLDDRVLHWIEVGQPDADRLTWCSRRTERTSLLAYGS--LRVWEGKVIPAIKNLKNVNIAAVPQDVLEVLAK-DPRVIKWDVI-SEGTVFVTDDRGQHEVQLQWLTGER
10	SPARKS	2ot9a	0.309	0.967	5.762	threading_10	-AQPSTTYKFELNLTDLDRGVYESVKQTIARHPSETEER-TVRLLAYAFWYNEQLAFGRGLSDVDEPALWEKSLDDRVLHWIEVGQPDADRLTWCSRRTERTSLLAYGS--LRVWEGKVIPAIKNLKNVNIAAVPQDVLEVLAKD-PRVIKWDV-ISEGTVFVTDDRGQHEVQLQWLTGER

Predicted Tertiary Structure


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TM-score=0.907 to 2g3wA TM-score=0.995 to native SCOP code=c.52.1.33	TM-score=0.903 to 2g3wA TM-score=0.995 to native SCOP code=c.52.1.33	TM-score=0.900 to 2g3wA TM-score=0.988 to native SCOP code=c.52.1.33	TM-score=0.900 to 2g3wA TM-score=0.988 to native SCOP code=c.52.1.33	TM-score=0.909 to 2g3wA TM-score=0.993 to native SCOP code=c.52.1.33

Experimental Structure

Download 3c0uB

SCOP code=c.52.1.33