Template-based Modeling Results for YAHN_ECOLI

Submitted Primary Sequence

>Length 223
MMQLVHLFMDEITMDPLHAVYLTVGLFVITFFNPGANLFVVVQTSLASGRRAGVLTGLGVALGDAFYSGLGLFGLATLITQCEEIFSLIRIVGGAYLLWFAWCSMRRQSTPQMSTLQQPISAPWYVFFRRGLITDLSNPQTVLFFISIFSVTLNAETPTWARLMAWAGIVLASIIWRVFLSQAFSLPAVRRAYGRMQRVASRVIGAIIGVFALRLIYEGVTQR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MMQLVHLFMDEITMDPLHAVYLTVGLFVITFFNPGANLFVVVQTSLASGRRAGVLTGLGVALGDAFYSGLGLFGLATLITQCEEIFSLIRIVGGAYLLWFAWCSMRRQSTPQMSTLQQPISAPWYVFFRRGLITDLSNPQTVLFFISIFSVTLNAETPTWARLMAWAGIVLASIIWRVFLSQAFSLPAVRRAYGRMQRVASRVIGAIIGVFALRLIYEGVTQR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MMQLVHLFMDEITMDPLHAVYLTVGLFVITFFNPGANLFVVVQTSLASGRRAGVLTGLGVALGDAFYSGLGLFGLATLITQCEEIFSLIRIVGGAYLLWFAWCSMRRQSTPQMSTLQQPISAPWYVFFRRGLITDLSNPQTVLFFISIFSVTLNAETPTWARLMAWAGIVLASIIWRVFLSQAFSLPAVRRAYGRMQRVASRVIGAIIGVFALRLIYEGVTQR
5322111012100000010000000000000001002000001100110120000000000000000000000000000110210010020000000000000002332223222233222121110002000000100100000000001002231221010000000000000010000000001101201120120011000000000002001321244
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MMQLVHLFMDEITMDPLHAVYLTVGLFVITFFNPGANLFVVVQTSLASGRRAGVLTGLGVALGDAFYSGLGLFGLATLITQCEEIFSLIRIVGGAYLLWFAWCSMRRQSTPQMSTLQQPISAPWYVFFRRGLITDLSNPQTVLFFISIFSVTLNAETPTWARLMAWAGIVLASIIWRVFLSQAFSLPAVRRAYGRMQRVASRVIGAIIGVFALRLIYEGVTQR
1	SPARKS	1kola	0.114	0.865	1.350	threading_1	VPYADFNLLDRDKAMEKIRDLTCLSDILPTGYGPG-STVYVA------G--------AG-PVGLAAAASARLLGAAVVIVLNPARLAHAKAQGFEIALHEQIAALLGEPEARGHGHEGAKHEAPATVLNSLMQV--TRVAGKIGIPGLYVT--EDPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQTPVMKYNRALMQAIMW--D--------RINIAEVVQV
2	PROSPECT2	2bkuB2	0.094	1.000	1.252	threading_2	SASISTFVMDKLEDAQSLQELQSNILTVLAAVIRKDMLMGLFFRLLEKKDSAFIEDDVFYAISALAASLGKGFELETFSPYLLKALNQVDSPVSITAVGFIADISNSLEEDFRRISNPNARRELKPAVLSVFIASNIGADFIPYLNDIMALCVENGTLEALDYQIKVLEAVLDAYVGIVAGLHDKPEALFPYVGTIFQFIAQVAEAAVGLIGVIDYIKRTRSG
3	SPARKS	1qora	0.076	0.883	1.218	threading_3	AILPAAISFEQAAASFLKGLTVYYLLRKTYEIKPD-EQFLFH------A-------AAG-GVGLIACQWAKALGAKLITVGTAQKAQSALKAGAWQVILVERLKEITGGKKVRVVYDSVGRDTWERSLD------CLQRRGLMVSFG-----NSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASVAEQQKYPLKAQRAHEILESR
4	PROSPECT2	3a0oA3	0.103	1.000	1.234	threading_4	DPNHCGWAWRQMYIDCQEVIYAIRHLAIAGRVLGRDDLLDASRKWLLANDEAGFRVVVALAWGYDWVLLERTREVADHVIAHRSLSAVLTPACIALWLDYTVEFLATLYSPWAGTDGGWAEGPHYWMTGMAYLIEAARPFFQNTGRFPLYTKASTLGDLPGLKLGYNVRQFAGVTGNGHYQWYFDHIKADATGTEMAFYNYGWWDLNFDDLVYRHDYPQVEAV
5	SPARKS	1heta	0.101	0.798	1.123	threading_5	VVDEISVALEKVCLIGCGFSTGYGSAVKVAKVTQG-STCAVF------G--------LG-GVGLSVIMGCKAAGAARIIGINKDKFAKAKEVGA-----------------TECVNPQDYKKPIQEVLTEFSFEVIGRLDTMVTALSC----CQEAYGVSVIVGVPPDLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMK--------KFALDPITHV
6	PROSPECT2	1xm9A	0.117	1.000	1.172	threading_6	DESAKQQVYQLGGICKLQNVQQAAAGALRNLVFRSTTNKLETRSLLRRTGNAEIQKQLTGLLWNLSKEELIADALPVLADRVIIPFSVFFNATGCSLMAYVQNCVAASRCDDNALPEEETNPKGSGWLYHSDAIRTYKKDATLEACAGALQNLTASKGLMSSGMSQLIGSDVVRSGASLLSNMSRHPLLHRVMGNSEDILSSACYTVRNLMAARLLLSDMWSS
7	SPARKS	1zsya	0.091	0.888	1.102	threading_7	VFSEEALILQSAATLGVNPCTAYRMLMDFEQLQPG-DSVIQN-------------ASNS-GVGQAVIQIAAALGLRTINPDIQKLSDRLKSLGAEHVI--TEEELRRPEMKNFFKDMPQPRCVGGKSSTELL--RQLARGGTMVTYG----GMAKQPVVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRR--GQLQVPLQYQSALEASMKP
8	PROSPECT2	1t33A	0.080	0.892	1.168	threading_8	MNIPTTTTKGEQAKSQLIAAALAQFGDIAALAGQNIAYLACAQWIADFLGEKFRPHAEKAERLFSQPAPDRDAIRELILLACKNMIMLLTQEDTVNLSKFISREQLSPT-----------------SAYQLVHEQVIDPLHTHL-TRLVAAYTGCDANDTRMILHTHALLGEVLAFRLGKETILLRTGWPQFDEEKAELIYQTVTCHI-----DLILHGL-TQ
9	SPARKS	1wlya	0.087	0.879	1.070	threading_9	VPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPG-DYVLI--HAAAGG------------MGHIMVPWARHLGATVITVSTEEKAETARKLGCHHTIFAEVVREITGGKGVDVVYDSIGKDTLQKSLD------CLRPRGMCAAYG----HASGVADPIRVVEDLGVRGSLFITRPALWHYMSNRSEIDEGSKCLFDAVKA--GVLHSPLRAAAAHKYMGGR
10	PROSPECT2	2db0A	0.089	0.906	1.159	threading_10	GEHLEKILIMAKYDESVLWTVVKNAISIIMVIAKTEPMLKKLFSLLKKSEAIPLTQEIAKAFGQMAKEKPELVMIPVLFANYRIGDEKTKINVSYALEEIA---------------------KANPMLMASIVRDFMNREDKLTALNFIEAMGENSFKYVNPFLPRIINLLHDGDEIVRASAVEALVHLATLNDKLRKVVIKRLEELLVNKTVKEGISRLLLL

Predicted Tertiary Structure


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TM-score=0.649 to 1kolA SCOP code=b.35.1.2	TM-score=0.697 to 3ea5B SCOP code=a.118.1.1	TM-score=0.807 to 1qorA SCOP code=b.35.1.2	TM-score=0.582 to 3sqcA SCOP code=a.102.4.2	TM-score=0.740 to 1axeA SCOP code=b.35.1.2