Template-based Modeling Results for YBEF_ECOLI


  Submitted Primary Sequence

>Length 317
MDSNNQIEPCLSRKSSEGKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MDSNNQIEPCLSRKSSEGKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF
CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHCCCCCEEEECCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCHHHHHCCCCEEEEECCCCCCHHHHHHHHCCCCCEEEEEECCHHHHHHHHHCCCEEEEHHHHHHHHHHHHCCCEEECCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MDSNNQIEPCLSRKSSEGKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF
55432323211244123222211110220000001001001322001200421311100002002200311312000110311210210120032013002102200233232232100000002000000001003002231140101002222022102323000001012222420211100222000001220121223021210031200000023321210221033122311000101100000000230100000011002100411301102002141440100000051122020020012003311
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMDSNNQIEPCLSRKSSEGKPQIFTTLRNIDLNLLTIFEAVYVHKGIVNAAKVLNLTPSAISQSIQKLRVIFPDPLFIRKGQGVTPTAFAMHLHEYISQGLESILGALDIEGSYDKQRTITIATTPSVGALVLPVIYRAIKTHYPQLLLRNPPISDAENQLSQFQTDLIIDNMFCTNRTVQHHVLFTDNMVLICREGNPLLSLEDDRETIDNAAHVLLLPEEQNFSGLRQRVQEMFPDRQINFTSYNILTIAALVANSDMLAIIPSRFYNLFSRCWPLEKLPFPSLNEEQIDFSIHYNKFSLRDPILHGVIDVIRNAF
1MUSTER2esnC0.2160.9183.324threading_1----------------------HPLLRRLDLNLLLVFDALYRHRNVGTAASELAISASAFSHALGRLRQGLDDELFLRQGNRMQPTQRAEHLAAAVAAALRALGEGLEEWRPFVPGRTFVFAATDYTAFALLPPLMNRLQHSAPGVRLRLVNAELSVEALASGRIDFALGY-DRLPEGIQAHDWFADRYVVVARRDHPRLAGAPTLEGYLAERHAVVTPWNEDSGVIDRLLARSGLRREVAVQLPTVLAALFLAGSTDFLLTAPRHAARALAEAAGLALYPAP-FDIPPYVLRLYSHV--QHRDAHAWMIGQLKGLD
2SPARKS2esna0.2200.9186.014threading_2-----------------------PLLRRLDLNLLLVFDALYRHRNVGTAASELAISASAFSHALGRLRQGLDDELFLRQGNRMQPTQRAEHLAAAVAAALRALGEGLEEWRPFVPQRTFVFAATDYTAFALLPPLMNRLQHSAPGVRLRLVNAELSVEALASGRIDFALGYDERLPEGIQAHDWFADRYVVVARRDHPRLAGAPTLEGYLAERHAVVTPWNEDSGVIDRLLARSGLRREVAVQLPTVLAALFLAGSTDFLLTAPRHAARALAEAAGLALYPAP-FDIPPYVLRLYSHV--QGRDAHAWMIGQLKGLD
3PROSPECT22esnA0.2200.9184.736threading_3-----------------------PLLRRLDLNLLLVFDALYRHRNVGTAASELAISASAFSHALGRLRQGLDDELFLRQGNRMQPTQRAEHLAAAVAAALRALGEGLEEWRPFVPQRTFVFAATDYTAFALLPPLMNRLQHSAPGVRLRLVNAELSVEALASGRIDFALGYDERLPEGIQAHDWFADRYVVVARRDHPRLAGAPTLEGYLAERHAVVTPWNEDSGVIDRLLARSGLRREVAVQLPTVLAALFLAGSTDFLLTAPRHAARALAEAAGLALYPAP-FDIPPYVLRLYSHV--QGRDAHAWMIGQLKGLD
4PPA-I2esnC0.2160.9187.386threading_4----------------------HPLLRRLDLNLLLVFDALYRHRNVGTAASELAISASAFSHALGRLRQGLDDELFLRQGNRMQPTQRAEHLAAAVAAALRALGEGLEEWRPFVPGRTFVFAATDYTAFALLPPLMNRLQHSAPGVRLRLVNAELSVEALASGRIDFALGY-DRLPEGIQAHDWFADRYVVVARRDHPRLAGAPTLEGYLAERHAVVTPWNEDSGVIDRLLARSGLRREVAVQLPTVLAALFLAGSTDFLLTAPRHAARALAEAAGLALYPAP-FDIPPYVLRLYSHV--QHRDAHAWMIGQLKGLD
5HHPRED-l1uth_A0.1500.6533.615threading_5------------------------------------------------------------------------------------------------------------TRNSFASTRTFNLAMTDIGEMYFMPPLMEALAQRAPHIQISTLRAGNLKEDMESGAVDLALGLLPELQTGFFQRRLFRHRYVCMFRKDHPSAKSPMSLKQFSELEHVGVVALNTGHGEVDGLLERAGIKRRMRLVVPHFIAIGPILHSTDLIATVPQRFAVRCEVPFGLTTSPHP-AKLPDIAINLFWHAKYNRDPGNMWLRQLFVEL-
6HHPRED-g1uth_A0.1590.6563.674threading_6------------------------------------------------------------------------------------------------------------TRNSFDPTRTFNLAMTDIGEMYFMPPLMEALAQRAPHIQISTLRPNNLKEDMESGAVDLALGLLPELQTGFFQRRLFRHRYVCMFRKDHPSAKSPMSLKQFSELEHVGVVALNTGHGEVDGLLERAGIKRRMRLVVPHFIAIGPILHSTDLIATVPQRFAVRCEVPFGLTTSPHP-AKLPDIAINLFWHAKYNRDPGNMWLRQLFVELF
7SP32esna0.2200.9186.021threading_7-----------------------PLLRRLDLNLLLVFDALYRHRNVGTAASELAISASAFSHALGRLRQGLDDELFLRQGNRMQPTQRAEHLAAAVAAALRALGEGLEEWRPFVPQRTFVFAATDYTAFALLPPLMNRLQHSAPGVRLRLVNAKLSVEALASGRIDFALGYDERLPEGIQAHDWFADRYVVVARRDHPRLAGAPTLEGYLAERHAVVTPWNEDSGVIDRLLARSGLRREVAVQLPTVLAALFLAGSTDFLLTAPRHAARALAEAAGLALYPAP-FDIPPYVLRLYSHV--QGRDAHAWMIGQLKGLD
8SAM-T992esnC0.2230.9056.242threading_8-------------------------LRRLDLNLLLVFDALYRHRNVGTAASELAISASAFSHALGRLRQGLDDELFLRQGNRMQPTQRAEHLAAAVAAALRALGEGLEEWRPFVPQRTFVFAATDYTAFALLPPLMNRLQHSAPGVRLRLVNAEKLVEALASGRIDFALG-YDRLPEGIQAHDWFADRYVVVARRDHPRLAGAPTLEGYLAERHAVVTPWNEDSGVIDRLLARSGLRREVAVQLPTVLAALFLAGSTDFLLTAPRHAARALAEAAGLALYPAPF-DIPPYVLRLYSHVQHRD--AHAWMIGQLKGL-
9MUSTER1utbB0.1640.6912.239threading_9-------------------------------------------------------------------------------------------------YALNTLQTALTTRDSFDPTRTFNLAMTDIGEMYFMPPLMEALAQRAPHIQISTLRPNNLSEDMESGAVDLALGLLPELQTGFFQRRLFRHRYVCMFRKDHPSAKSPMSLKQFSELEHVGVVALNTGHGEVDGLLERAGIKRRMRLVVPHFIAIGPILHSTDLIATVPERFAVRCEVPFGLTTSPHP-AKLPDIAINLFWHAKYNRDPGNMWLRQLFVELF
10SPARKS3fxra0.1670.9093.981threading_10---------------------------MLKLQTLQALICIEEVGSLRAAAQLLHLSQPALSAAIQQLEDELKAPLLVRTKRGVSLTSFGQAFMKHARLIVTESRRAQEEIGQLRGRWHITFAASPAIALAALPLALASFAREFPDVTVNVRMYPAVSPQLRDGTLDFALTAAHDIDTDLEAQPLYVSDVVIVGQRQHPMANAT-RLAELQECRWAFSSAPRGPGAIIRNAFARYGLPEKLGLVCESFLALPGVVAHSDLLTTMPRTLYERNAFKDQLCSIPLQD-ALPNPTIYVLRRHDLPVTPAAAGLIRWIQHHA

  Predicted Tertiary Structure

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TM-score=0.939 to 2esnC
SCOP code=a.4.5.37
TM-score=0.909 to 2esnC
SCOP code=a.4.5.37
TM-score=0.787 to 2esnC
SCOP code=a.4.5.37
TM-score=0.787 to 2esnC
SCOP code=a.4.5.37
TM-score=0.939 to 2esnC
SCOP code=a.4.5.37