Template-based Modeling Results for YBHB_ECOLI


  Submitted Primary Sequence

>Length 158
MKLISNDLRDGDKLPHRHVFNGMGYDGDNISPHLAWDDVPAGTKSFVVTCYDPDAPTGSGWWHWVVVNLPADTRVLPQGFGSGLVAMPDGVLQTRTDFGKTGYDGAAPPKGETHRYIFTVHALDIERIDVDEGASGAMVGFNVHFHSLASASITAMFS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKLISNDLRDGDKLPHRHVFNGMGYDGDNISPHLAWDDVPAGTKSFVVTCYDPDAPTGSGWWHWVVVNLPADTRVLPQGFGSGLVAMPDGVLQTRTDFGKTGYDGAAPPKGETHRYIFTVHALDIERIDVDEGASGAMVGFNVHFHSLASASITAMFS
CEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEECCCCCCCEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEECCCCCCCCCEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCEEEEEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MKLISNDLRDGDKLPHRHVFNGMGYDGDNISPHLAWDDVPAGTKSFVVTCYDPDAPTGSGWWHWVVVNLPADTRVLPQGFGSGLVAMPDGVLQTRTDFGKTGYDGAAPPKGETHRYIFTVHALDIERIDVDEGASGAMVGFNVHFHSLASASITAMFS
22020231431330122100212213133100200024023202000000111211210100000000011113212311122222123101102111221002000124131110000000021331303320102100210221000101010215
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMKLISNDLRDGDKLPHRHVFNGMGYDGDNISPHLAWDDVPAGTKSFVVTCYDPDAPTGSGWWHWVVVNLPADTRVLPQGFGSGLVAMPDGVLQTRTDFGKTGYDGAAPPKGETHRYIFTVHALDIERIDVDEGASGAMVGFNVHFHSLASASITAMFS
1MUSTER1vi3A0.9740.9814.134threading_1LKLISNDLRDGDKLPHRHVFNG-GYDGDNISPHLAWDDVPAGTKSFVVTCYDPDAPTGSGWWHWVVVNLPADTRVLPQGFGSGLVA-PDGVLQTRTDFGKTGYDGAAPPKGETHRYIFTVHALDIERIDVDEGASGA-VGFNVHFHSLASASITAFSE
2SPARKS1fjja0.9550.9755.721threading_2AKLISNDLRDGDKLPHRHVFNG-GYDGDNISPHLAWDDVPAGTKSFVVTCYDPDAPTGSGWWHWVVVNLPADTRVLPQGFGS-GLVAPDGVLQTRTDFGKTGYDGAAPPKGETHRYIFTVHALDIERIDVDEGASGA-VGFNVHFHSLASASITAFS-
3PROSPECT23n08A0.3190.9112.760threading_3MQLTSQAFSYGRPIPKKY-----SCQGVGISPPLSFSDVPREAKSLVLIVEDPDVPPDGLWIHWIVYNLSPVVSNLAEGA-------QIFAVQGLNTAGEIGYCPPCPPDA-KHRYYFYAYALDVV-LSDEEGVTKEQLLEAMDGHIIATAELMGTYE
4PPA-I1vi3A0.9290.9814.635threading_4LKLISNDLRDGDKLPHRHVFNG-GYDGDNISPHLAWDDVPAGTKSFVVTCYDPDAPTGSGWWHWVVVNLPADTRVLPQGFG-SGLVAPDGVLQTRTDFGKTGYDGAAPPKGETHRYIFTVHALDIERIDVDEGAS-GAVGFNVHFHSLASASITAFSE
5HHPRED-l1fjj_A1.0000.9627.004threading_5-KLISNDLRDGDKLPHRHVFNG-GYDGDNISPHLAWDDVPAGTKSFVVTCYDPDAPTGSGWWHWVVVNLPADTRVLPQGFGSGLVA-PDGVLQTRTDFGKTGYDGAAPPKGETHRYIFTVHALDIERIDVDEGASGA-VGFNVHFHSLASASITA-F-
6HHPRED-g1fjj_A1.0000.9685.930threading_6-KLISNDLRDGDKLPHRHVFNG-GYDGDNISPHLAWDDVPAGTKSFVVTCYDPDAPTGSGWWHWVVVNLPADTRVLPQGFGSGLVA-PDGVLQTRTDFGKTGYDGAAPPKGETHRYIFTVHALDIERIDVDEGASGA-VGFNVHFHSLASASITA-FS
7SP31fjja0.9550.9755.616threading_7AKLISNDLRDGDKLPHRHVFNG-GYDGDNISPHLAWDDVPAGTKSFVVTCYDPDAPTGSGWWHWVVVNLPADTRVLPQGFGS-GLVAPDGVLQTRTDFGKTGYDGAAPPKGETHRYIFTVHALDIERIDVDEGASGA-VGFNVHFHSLASASITAFS-
8SAM-T991fuxA0.5030.9945.353threading_8FQVTSNEIKTGEQLTTSHVFSGFGCEGGNTSPSLTWSGVPEGTKSFAVTVYDPDAPTGSGWWHWTVVNIPATVTYLPVDAGRRDGKLPTGAVQGRNDFGYAGFGGACPPKGDPHHYQFKVWALKTEKIPVDSNSSGALVGYLNANK-IATAEITPVYE
9MUSTER1fuxA0.4970.9943.776threading_9FQVTSNEIKTGEQLTTSHVFSGFGCEGGNTSPSLTWSGVPEGTKSFAVTVYDPDAPTGSGWWHWTVVNIPATVTYLPVDARRDGTKLPTGAVQGRNDFGYAGFGGACPPKGDPHHYQFKVWALKTEKIPVDSNSSGALVGY-LNANKIATAEITPVYE
10SPARKS3n08a0.3190.9115.053threading_10MQLTSQAFSYGRPIPKKY-----SCQGVGISPPLSFSDVPREAKSLVLIVEDPDVPPDGLWIHWIVYNLSPVVSNLAEGA-------QIFAVQGLNTAGEIGYCPPCPPDA-KHRYYFYAYALDVV-LSDEEGVTKEQLLEAMDGHIIATAELMGTYE

  Predicted Tertiary Structure

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TM-score=0.982 to 1vi3A
TM-score=0.991 to native
SCOP code=b.17.1.2		 TM-score=0.978 to 1vi3A
TM-score=0.990 to native
SCOP code=b.17.1.2		 TM-score=0.968 to 1vi3A
TM-score=0.992 to native
SCOP code=b.17.1.2		 TM-score=0.857 to 1vi3A
TM-score=0.873 to native
SCOP code=b.17.1.2		 TM-score=0.979 to 1vi3A
TM-score=0.990 to native
SCOP code=b.17.1.2

  Experimental Structure

Download 1fjjA
SCOP code=b.17.1.2