Template-based Modeling Results for YBHG_ECOLI

Submitted Primary Sequence

>Length 332
MMKKPVVIGLAVVVLAAVVAGGYWWYQSRQDNGLTLYGNVDIRTVNLSFRVGGRVESLAVDEGDAIKAGQVLGELDHKPYEIALMQAKAGVSVAQAQYDLMLAGYRNEEIAQAAAAVKQAQAAYDYAQNFYNRQQGLWKSRTISANDLENARSSRDQAQATLKSAQDKLRQYRSGNREQDIAQAKASLEQAQAQLAQAELNLQDSTLIAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRPVWVRAYVDERNLDQAQPGRKVLLYTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMPVTVQFGDEAGHE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MMKKPVVIGLAVVVLAAVVAGGYWWYQSRQDNGLTLYGNVDIRTVNLSFRVGGRVESLAVDEGDAIKAGQVLGELDHKPYEIALMQAKAGVSVAQAQYDLMLAGYRNEEIAQAAAAVKQAQAAYDYAQNFYNRQQGLWKSRTISANDLENARSSRDQAQATLKSAQDKLRQYRSGNREQDIAQAKASLEQAQAQLAQAELNLQDSTLIAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRPVWVRAYVDERNLDQAQPGRKVLLYTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMPVTVQFGDEAGHE
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEECCCCCEEEEEECCCCCEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCEEEEEEECCCCCEECCCCCEEEEEECCCEEEEEECCHHHHHCCCCCCEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCEEEEEECCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MMKKPVVIGLAVVVLAAVVAGGYWWYQSRQDNGLTLYGNVDIRTVNLSFRVGGRVESLAVDEGDAIKAGQVLGELDHKPYEIALMQAKAGVSVAQAQYDLMLAGYRNEEIAQAAAAVKQAQAAYDYAQNFYNRQQGLWKSRTISANDLENARSSRDQAQATLKSAQDKLRQYRSGNREQDIAQAKASLEQAQAQLAQAELNLQDSTLIAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRPVWVRAYVDERNLDQAQPGRKVLLYTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMPVTVQFGDEAGHE
53321101000000000000000111213332211010102020010004120102101032222022111002013321120022021101202221231232123310220121023021102202311210211152521113102202211220221021023112212222233112202110220211012012213202010212010001002301101420100000114201010103131033033122020101022322020100000220311242132322211000202010232332032000010201333369
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MMKKPVVIGLAVVVLAAVVAGGYWWYQSRQDNGLTLYGNVDIRTVNLSFRVGGRVESLAVDEGDAIKAGQVLGELDHKPYEIALMQAKAGVSVAQAQYDLMLAGYRNEEIAQAAAAVKQAQAAYDYAQNFYNRQQGLWKSRTISANDLENARSSRDQAQATLKSAQDKLRQYRSGNREQDIAQAKASLEQAQAQLAQAELNLQDSTLIAPSDGTLLTRAVEPGTVLNEGGTVFTVSLTRPVWVRAYVDERNLDQAQPGRKVLLYTDGRPDKPYHGQIGFVSPTAEFTPKTVETPDLRTDLVYRLRIVVTDADDALRQGMPVTVQFGDEAGHE
1	MUSTER	3fppB	0.233	0.774	2.199	threading_1	---------------------------RPGDLQVLATGKLDALRKVDV-QVSGQLKTLSVAIGDKVKKDQLLGVID-----------------PEQAENQIKEV--EATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYT-------------------RIVAPMAGEVTQITTLQGQTVIAAQQILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDQLTRYEGQIKDVLPT----PEKVNDA-----IFYYARFEVPNPNGLLRLDMTAQVHIQLTDVKN
2	SPARKS	3fppa	0.266	0.780	4.981	threading_2	--------------------------PGDLQQSVLATGKLDARKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLME-------------------LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKR-------------------NQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDQLTRYEGQIKDVLPT----PEKVNDA-----IFYYARFEVPNPNGLLRLDMTAQVHIQLTDVKN
3	PROSPECT2	3fppA	0.266	0.780	3.908	threading_3	P--------------------------GDLQQSVLATGKLDARKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLM-------------------ELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTID-------------------AQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDQLTRYEGQIKDVLPTPEKVNDAIF---------YYARFEVPNPNGLLRLDMTAQVHIQLTDVKN
4	PPA-I	3fppB	0.234	0.786	3.213	threading_4	------------------------RPGDLQQSVLATGKLDALRKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVID-------------------PEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYT-------------------RIVAPMAGEVTQITTLQGQTVIAAQQILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDQLTRYEGQIKDVLPT----PEKVNDA-----IFYYARFEVPNPNGLLRLDMTAQVHIQLTDVKN
5	HHPRED-l	3fpp_A	0.271	0.777	4.585	threading_5	--------------------------PGDLQQSVLATGKLDARKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQR-------------------QQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTI-------------------DAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDQLTRYEGQIKDVLPTPEKVNDA---------IFYYARFEVPNPNGLLRLDMTAQVHIQLTDVK-
6	HHPRED-g	3fpp_A	0.271	0.777	4.444	threading_6	---------------------------PGDQQSVLATGKLDARKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELR-------------------AQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTI-------------------DAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDQLTRYEGQIKDVLPTPE----KVND-----AIFYYARFEVPNPNGLLRLDMTAQVHIQLTDVKN
7	SP3	3fppa	0.259	0.780	4.060	threading_7	--------------------------PGDLQQSVLATGKLDARKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLME-------------------LRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTIDAQIKR-------------------NQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDQLTRYEGQIKDVLPTP-----EKVNDAI----FYYARFEVPNPNGLLRLDMTAQVHIQLTDVKN
8	SAM-T99	3fppB	0.269	0.762	4.839	threading_8	-------------------------RPGDLQQSVLATGKLDARKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQAE-------------------AELKLARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQAQIGTI-------------------DAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQNILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDQLTRYEGQIKDVLPTPE---------KVNDAIFYYARFEVPNPNGLLRLDMTAQVHI-------
9	MUSTER	3lnnA	0.252	0.789	1.603	threading_9	V-ESPLRRTLAVAPAT----------RETVAAPFNLPAMIEADLVKVLPPLAGRIVSLNKQLGDEVKAGDVLFTIDSAD------------------------------LAQANSDAAKARAAMTMARRNLDRQRELDKSEIAAKRDFEQAQSDYDQAASESQRADARLAQLGAKGGGTLQAGGGH-----------------ILAVRSPINGRVVDLNAATGAYWNDTASLMTVADLSHVFVTANAQEKDLGHVYVGQSATVKFDAYDDP-QPGKVRYVGQI--LDADTRT---------TKVRMVFDNPDGRLRPGMFAQATFLSQPHEG
10	SPARKS	3lnna	0.247	0.780	3.601	threading_10	PLRRTLAVAPAT--------------RETVAAPFNLPAMIEADLVKVLPPLAGRIVSLNKQLGDEVKAGDVLFTIDSAD------------------------------LAQANSDAAKARAAMTMARRNLDRQRELDKSEIAAKRDFEQAQSDYDQAASESQRADARLAQLGAKGGGTLQAGGG-----------------HILAVRSPINGRVVDLNAATGAYWNDTTSLMTVADLSHVFVTANAQEKDLGHVYVGQSATVKFDAYDD-PQPGKVRYVGQI--LDADTRT---------TKVRMVFDNPDGRLRPGMFAQATFLSQPHEG

Predicted Tertiary Structure


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TM-score=0.467 to 1qjoA SCOP code=b.84.1.1	TM-score=0.494 to 1iyuA SCOP code=b.84.1.1	TM-score=0.498 to 1iyuA SCOP code=b.84.1.1	TM-score=0.501 to 1iyuA SCOP code=b.84.1.1	TM-score=0.498 to 1l8dA SCOP code=h.4.12.1