Template-based Modeling Results for YBHK_ECOLI

Submitted Primary Sequence

>Length 302
MRNRTLADLDRVVALGGGHGLGRVLSSLSSLGSRLTGIVTTTDNGGSTGRIRRSEGGIAWGDMRNCLNQLITEPSVASAMFEYRFGGNGELSGHNLGNLMLKALDHLSVRPLEAINLIRNLLKVDTHLIPMSEHPVDLMAIDDQGHEVYGEVNIDQLTTPIQELLLTPNVPATREAVHAINEADLIIIGPGSFYTSLMPILLLKEIAQALRRTPAPMVYIGNLGRELSLPAANLKLESKLAIMEQYVGKKVIDAVIVGPKVDVSAVKERIVIQEVLEASDIPYRHDRQLLHNALEKALQALG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MRNRTLADLDRVVALGGGHGLGRVLSSLSSLGSRLTGIVTTTDNGGSTGRIRRSEGGIAWGDMRNCLNQLITEPSVASAMFEYRFGGNGELSGHNLGNLMLKALDHLSVRPLEAINLIRNLLKVDTHLIPMSEHPVDLMAIDDQGHEVYGEVNIDQLTTPIQELLLTPNVPATREAVHAINEADLIIIGPGSFYTSLMPILLLKEIAQALRRTPAPMVYIGNLGRELSLPAANLKLESKLAIMEQYVGKKVIDAVIVGPKVDVSAVKERIVIQEVLEASDIPYRHDRQLLHNALEKALQALG
CCCCCCCCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEECCCCCCEEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHCCEEEEEHHHHCCCCCCCCHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MRNRTLADLDRVVALGGGHGLGRVLSSLSSLGSRLTGIVTTTDNGGSTGRIRRSEGGIAWGDMRNCLNQLITEPSVASAMFEYRFGGNGELSGHNLGNLMLKALDHLSVRPLEAINLIRNLLKVDTHLIPMSEHPVDLMAIDDQGHEVYGEVNIDQLTTPIQELLLTPNVPATREAVHAINEADLIIIGPGSFYTSLMPILLLKEIAQALRRTPAPMVYIGNLGRELSLPAANLKLESKLAIMEQYVGKKVIDAVIVGPKVDVSAVKERIVIQEVLEASDIPYRHDRQLLHNALEKALQALG
54332223231000001011001001001202220000000122211113122221010111001001200322210110011201120302111001000100121122022002001210303020001032201000113312201010202322221110001231310430020023020000001000000001000330020033130200000101222222123020310010013101331000000023222321332100110022231222101310030023004325
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MRNRTLADLDRVVALGGGHGLGRVLSSLSSLGSRLTGIVTTTDNGGSTGRIRRSEGGIAWGDMRNCLNQLITEPSVASAMFEYRFGGNGELSGHNLGNLMLKALDHLSVRPLEAINLIRNLLKVDTHLIPMSEHPVDLMAIDDQGHEVYGEVNIDQLTTPIQELLLTPNVPATREAVHAINEADLIIIGPGSFYTSLMPILLLKEIAQALRRTPAPMVYIGNLGRELSLPAANLKLESKLAIMEQYVGKKVIDAVIVGPKVDVSAVKERIVIQEVLEASDIPYRHDRQLLHNALEKALQALG
1	MUSTER	2ppvA	0.337	0.954	2.198	threading_1	--------KQNVVLIGGGTGLSVLARGLREFPIDITAIVTVADNGGSTGKIR-DVDIPAPGDIRNVIAALSDSESILTQLFQYRF-GENQVDGHSLGNLVIAGT-NITNDFGHAIKELSKVLNIKGQVIPSTNASVQLNAVE-DGEIVHGETNIPKTHKKIDRVFLEPSDVEPNEAIEALEQADLIVLGPGSLYTSVISNLCVKGISEALLRTSAPKLYVSNVTQP--GETDNYDVKEHIDALTRQVGEPFIDFVICSSESYSKDVLQRVLTASNLISNEHYVRHNTKVLSKIYELALELTS
2	SPARKS	2hzba	0.311	0.937	5.650	threading_2	-------KKKNVVVFGGGTGLSVLLRGLKTFPVSITAIVTVADDGGSSGRLRKELDIPPPGDVRNVLVALSEVEPLLEQLFQHRFENGNGLSGHSLGNLLLAGTS-ITGDFARGIS-ESKVLNVRGKVLPASNRSIILHGE-EDGTIVTGESSIPKAGKKIKRVFLTPKTKPLREGLEAIRKADVIVIGPGSLYTSVLPNLLVPGICEAIKQSTARKVYICNVTQN--GETDGYTASDHLQAIDH-CGVGIVDDILVHGEPISDTVKAKTISDYFVLEQDDVLRHNASKVSEAILE------
3	PROSPECT2	2ppvA	0.337	0.954	3.864	threading_3	--------KQNVVLIGGGTGLSVLARGLREFPIDITAIVTVADNGGSTGKI-RDVDIPAPGDIRNVIAALSDSESILTQLFQYRF-GENQVDGHSLGNLVIAG-TNITNDFGHAIKELSKVLNIKGQVIPSTNASVQLNA-VEDGEIVHGETNIPKTHKKIDRVFLEPSDVEPNEAIEALEQADLIVLGPGSLYTSVISNLCVKGISEALLRTSAPKLYVSNVTQP--GETDNYDVKEHIDALTRQVGEPFIDFVICSSESYSKDVLQRYEEKNVEISNEHYVRHNTKVLSKIYELALELTS
4	PPA-I	2ppvA	0.339	0.937	4.306	threading_4	--------KQNVVLIGGGTGLSVLARGLREFPIDITAIVTVADNGGSTGKIR-DVDIPAPGDIRNVIAALSDSESILTQLFQYRFGEN-QVDGHSLGNLVIAGT-NITNDFGHAIKELSKVLNIKGQVIPSTNASVQLNAVE-DGEIVHGETNIPKTHKKIDRVFLEPSDVEPNEAIEALEQADLIVLGPGSLYTSVISNLCVKGISEALLRTSAPKLYVSNVTQP--GETDNYDVKEHIDALTRQVGEPFIDFVICSSESYSKDV-----LQRYEEKNSKPVAVHKEQLKDSGIRVLTASN
5	HHPRED-l	2o2z_A	0.304	0.927	6.674	threading_5	-------KKKNVIVFGGGTGLSVLLRGLKTFPVSITAIVTVADDGGSSGRLRKELDIPPPGDVRNVLVALSEVEPLLEQLFQHRFENG-GLSGHSLGNLLLAG-TSITGDFARGISE-SKVLNVRGKVLPASNRSIILHGE-EDGTIVTGESSIPKAGKKIKRVFLTPDTKPLREGLEAIRKADVIVIGPGSLYTSVLPNLLVPGICEAIKQSTARKVYICNV-TQNG-ETDGYTASDHLQAI-DHCGVGIVDDILVHGEPISDTVGVGTISDYFVLEQ--VLRHNASKVSEAILE------
6	HHPRED-g	2o2z_A	0.307	0.927	5.694	threading_6	-------KKKNVIVFGGGTGLSVLLRGLKTFPVSITAIVTVADDGGSSGRLRKELDIPPPGDVRNVLVALSEVEPLLEQLFQHRFENG-GLSGHSLGNLLLAG-TSITGDFARGISE-SKVLNVRGKVLPASNRSIILHGE-EDGTIVTGESSIPKAGKKIKRVFLTPKTKPLREGLEAIRKADVIVIGPGSLYTSVLPNLLVPGICEAIKQSTARKVYICNV-TQNG-ETDGYTASDHLQAI-DHCGVGIVDDILVHGEPISDTVKAKYAKEDYFVEQ--VLRHNASKVSEAILE------
7	SP3	2hzba	0.311	0.937	5.664	threading_7	-------KKKNVVVFGGGTGLSVLLRGLKTFPVSITAIVTVADDGGSSGRLRKELDIPPPGDVRNVLVALSEVEPLLEQLFQHRFENGNGLSGHSLGNLLLAGTS-ITGDFARGIS-ESKVLNVRGKVLPASNRSIILHGE-EDGTIVTGESSIPKAGKKIKRVFLTPKTKPLREGLEAIRKADVIVIGPGSLYTSVLPNLLVPGICEAIKQSTARKVYICNV-TQNG-ETDGYTASDHLQAIDHC-GVGIVDDILVHGEPISDTVKAKTISDYFVLEQDDVLRHNASKVSEAILE------
8	SAM-T99	2hzbA	0.311	0.937	5.830	threading_8	-------KKKNVVVFGGGTGLSVLLRGLKTFPVSITAIVTVADDGGSSGRLRKELDIPPPGDVRNVLVALSEVEPLLEQLFQHRFENGNGLSGHSLGNLLLAGTSITG-DFARGISE-SKVLNVRGKVLPASNRSIILHGE-EDGTIVTGESSIPKAGKKIKRVFLTPDTKPLREGLEAIRKADVIVIGPGSLYTSVLPNLLVPGICEAIKQSTARKVYICNVTQN-G-ETDGYTASDHLQAI-DHCGVGIVDDILVHGEPISDTVKAKYAKEYFVLEQDDVLRHNASKVSEAILE------
9	MUSTER	2hzbA	0.312	0.934	2.157	threading_9	-------KKKNVVVFGGGTGLSVLLRGLKTFPVSITAIVTVADDGGSSGRLRKELDIPPPGDVRNVLVALSEVEPLLEQLFQHRFENGNGLSGHSLGNLLLAGT-SITGDFARGISE-SKVLNVRGKVLPASNRSIILHGE--DGTIVTGESSIPKAGKKIKRVFLTPDTKPLREGLEAIRKADVIVIGPGSLYTSVLPNLLVPGICEAIKQSTARKVYICNVTQN--GETDGYTASDHLQAI-DHCGVGIVDDILVHGEPISDTVKAGTISDYFVLEQDDVLRHNASKVSEAILE------
10	SPARKS	2q7xa	0.296	0.884	4.688	threading_10	---------RPITVIGGGTGSPVILSLRE--DVEIAAIVTVADDGGSSGELRN-----QPGDLRNVLVA----SDPFYEVFQYRFS---EFAGHPLGNLIIAGLSEQGSTYNAQ---LLSFFHTTG-IYPSSDHPLTLHAVFQDGTEVAGESHIVDHRGIIDNVYVTNTPLASRRVVQTILESD-IVLGPGSLFTSILPNIVIE-IGRALLET-AEIAYVCNI-TQRG-ETEHFTDSDHVEVLHRHLGRPFIDTVLVNIEVPQEYNSNRVISSNFLRLENGGAFHDGDLIVDE-LRIIQV--

Predicted Tertiary Structure


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TM-score=0.844 to 2hzbA SCOP code=c.143.1.1	TM-score=0.855 to 2hzbA SCOP code=c.143.1.1	TM-score=0.905 to 2hzbA SCOP code=c.143.1.1	TM-score=0.851 to 2hzbA SCOP code=c.143.1.1	TM-score=0.869 to 2hzbA SCOP code=c.143.1.1