Template-based Modeling Results for YBIS_ECOLI


  Submitted Primary Sequence

>Length 306
MNMKLKTLFAAAFAVVGFCSTASAVTYPLPTDGSRLVGQNQVITIPEGNTQPLEYFAAEYQMGLSNMMEANPGVDTFLPKGGTVLNIPQQLILPDTVHEGIVINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAEYRAAGEPLPAVVPAGPDNPMGLYALYIGRLYAIHGTNANFGIGLRVSHGCVRLRNEDIKFLFEKVPVGTRVQFIDEPVKATTEPDGSRYIEVHNPLSTTEAQFEGQEIVPITLTKSVQTVTGQPDVDQVVLDEAIKNRSGMPVRLN
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNMKLKTLFAAAFAVVGFCSTASAVTYPLPTDGSRLVGQNQVITIPEGNTQPLEYFAAEYQMGLSNMMEANPGVDTFLPKGGTVLNIPQQLILPDTVHEGIVINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAEYRAAGEPLPAVVPAGPDNPMGLYALYIGRLYAIHGTNANFGIGLRVSHGCVRLRNEDIKFLFEKVPVGTRVQFIDEPVKATTEPDGSRYIEVHNPLSTTEAQFEGQEIVPITLTKSVQTVTGQPDVDQVVLDEAIKNRSGMPVRLN
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEEHHCEEEEEECCCEEEEEEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCEECC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MNMKLKTLFAAAFAVVGFCSTASAVTYPLPTDGSRLVGQNQVITIPEGNTQPLEYFAAEYQMGLSNMMEANPGVDTFLPKGGTVLNIPQQLILPDTVHEGIVINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAEYRAAGEPLPAVVPAGPDNPMGLYALYIGRLYAIHGTNANFGIGLRVSHGCVRLRNEDIKFLFEKVPVGTRVQFIDEPVKATTEPDGSRYIEVHNPLSTTEAQFEGQEIVPITLTKSVQTVTGQPDVDQVVLDEAIKNRSGMPVRLN
531111000000000000000011221202232241112110020232323202100111210111012112223121132121010123221332233000001231100001332100000000003223312222101021222122121212012213121321121021122111000001001000000011222111310200020212002200320321020100222031223331210010021133232323232101010220021012233121200120033322111324
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMNMKLKTLFAAAFAVVGFCSTASAVTYPLPTDGSRLVGQNQVITIPEGNTQPLEYFAAEYQMGLSNMMEANPGVDTFLPKGGTVLNIPQQLILPDTVHEGIVINSAEMRLYYYPKGTNTVIVLPIGIGQLGKDTPINWTTKVERKKAGPTWTPTAKMHAEYRAAGEPLPAVVPAGPDNPMGLYALYIGRLYAIHGTNANFGIGLRVSHGCVRLRNEDIKFLFEKVPVGTRVQFIDEPVKATTEPDGSRYIEVHNPLSTTEAQFEGQEIVPITLTKSVQTVTGQPDVDQVVLDEAIKNRSGMPVRLN
1MUSTER1y7mA0.3190.5231.411threading_1----------------------------------------LTYQVKQGDT--LNSIAADFRISTAALLQANPSLQAGLT-AGQSIVIPG-LPDPYTIPYHIAVSIGAKTLTLSL--NNRVKTYPIAVGKILTQTP-TGEFYIINRQRNP---------------------------GGPFGAYWLSLSAHYGIHGTNNPASIGKAVSKGCIRH-NKDVIELASIVPNGTRVTINR-----------------------------------------------------------------------
2PROSPECT21sezA10.0730.9441.511threading_2AKAGVSGLAAAYKLK------IHGLNVTVFEAEGKAGGKLRSVSQDGESEGDVTFLIDSLGL-REKQQFPLSQNKRYIARNGTPVLLPSKTSANKKRQRGSFSFLGGQTLTLRLNSRVLELSCS----CTEDSAIDSWSIISASPHKRQSEEESFDAVITAPLCDVKSKIAKRGNPFLLNFIPEVDYVPLSVVITTFKRENVKYPLEGFGVLVPSKEQQH------GLKTLGTLFSSFPDRAPNNVYLYTTFVGGSRNRELAKASRTELKEIVTSDLKQLLGLYGHNYDSVLDAIDKEKNLPGSVS
3SPARKS1y7ma0.3120.5233.178threading_3----------------------------------------LTYQVKQGDT--LNSIAADFRISTAALLQANPSLQAGLT-AGQSIVIPGLPD-PYTIPYHIAVSIGAKTLTLSL--NNRVKTYPIAVGKILTQTP-TGEFYIINRQRNP---------------------------GGPFGAYWLSLSAHYGIHGTNNPASIGKAVSKGCIRH-NKDVIELASIVPNGTRVTINR-----------------------------------------------------------------------
4PROSPECT21zatA0.1780.6802.133threading_4KEQLASMNAIANVQVRQYVTDLGTKYNTSTNDTKFKSTKRGEVTVPVGTYSWTIQTDSET---EALKKAILAGQDFTRSPI----VQGGTTADHPLIEDTYIEVDLENQHMWYYKDGKVALETDIVSGKPTTPTP-AGVFYVWNKEEDATLKGT------------------NGTPYESPVNYWMPIDTGVGIHDSDWQPEYGGDGSHGCINTPPSVMKELFGMVEKGTPVLV------------------------------------------------------------------------F
5PPA-I1y7mA0.3120.5232.004threading_5----------------------------------------LTYQVKQGDT--LNSIAADFRISTAALLQANPSLQAGLT-AGQSIVIPG-LPDPYTIPYHIAVSIGAKTLTLSLNN--RVKTYPIAVGKILTQTPT-GEFYIINRQRNP---------------------------GGPFGAYWLSLSAHYGIHGTNNPASIGKAVSKGCIRH-NKDVIELASIVPNGTRVTINR-----------------------------------------------------------------------
6HHPRED-l1y7m_A0.3060.5238.032threading_6----------------------------------------LTYQVKQGDT--LNSIAADFRISTAALLQANPSLQAGLT-AGQSIVIPG-LPDPYTIPYHIAVSIGAKTLTLSL-NNRV-KTYPIAVGKILTQTPTGEFYIIN-RQR---------------------------NPGGPFGAYWLSLSAHYGIHGTNNPASIGKAVSKGCIR-HNKDVIELASIVPNGTRVTINR-----------------------------------------------------------------------
7HHPRED-g1y7m_A0.3060.5237.127threading_7----------------------------------------LTYQVKQGDT--LNSIAADFRISTAALLQANPSLQAGLT-AGQSIVIPG-LPDPYTIPYHIAVSIGAKTLTLSLN-NRV-KTYPIAVGKILTQTPT-GEFYIINRQRN---------------------------PGGPFGAYWLSLSAHYGIHGTNNPASIGKAVSKGCIR-HNKDVIELASIVPNGTRVTINR-----------------------------------------------------------------------
8SP31y7ma0.3060.5233.244threading_8----------------------------------------LTYQVKQGDT--LNSIAADFRISTAALLQANPSLQAGLT-AGQSIVIPGLPDPY-TIPYHIAVSIGAKTLTLSL--NNRVKTYPIAVGKILTQTP-TGEFYIINRQRNP---------------------------GGPFGAYWLSLSAHYGIHGTNNPASIGKAVSKGCIRH-NKDVIELASIVPNGTRVTINR-----------------------------------------------------------------------
9SAM-T991y7mA0.3100.5165.401threading_9----------------------------------------LTYQVKQG--DTLNSIAADFRISTAALLQANPSLQAGLT-AGQSIVIPGLP-DPYTIPYHIAVSIGAKTLTL--SLNNRVKTYPIAVGKILTQTPT-GEFYIINRQRNP---------------------------GGPFGAYWLSLSAHYGIHGTNNPASIGKAVSKGCIR-HNKDVIELASIVPNGTRVTI-------------------------------------------------------------------------
10MUSTER1zatA0.1980.6600.950threading_10GKVDLTEQVRQYVTDLGTKYNTSTNDTKFKSTKR------GEVTVPVGTYSWTIQTDSETEALKKAILAGQDFTRSPIVQGGTT------ADHPLIEDTYIEVDLENQHMWYYK-DGKVALETDIVSGKPTTPTP-AGVFYVWNKEEDATLKGTNG-----------------TPYESPVN-YWMPIDWGVGIHDSDWQPEYGGRGSHGCINTPPSVMKELFGMVEKGTPVLVF------------------------------------------------------------------------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.741 to 1y7mA
SCOP code=b.160.1.1
TM-score=0.549 to 1sezA
SCOP code=c.3.1.2
TM-score=0.742 to 1y7mA
SCOP code=b.160.1.1
TM-score=0.742 to 1y7mA
SCOP code=b.160.1.1
TM-score=0.688 to 1zatA
SCOP code=b.160.1.1