Template-based Modeling Results for C56I_ECOLI

Submitted Primary Sequence

>Length 188
MSFTNTPERYGVISAAFHWLSAIIVYGMFALGLWMVTLSYYDGWYHKAPELHKSIGILLMMGLVIRVLWRVISPPPGPLPSYSPMTRLAARAGHLALYLLLFAIGISGYLISTADGKPISVFGWFDVPATLADAGAQADFAGALHFWLAWSVVVLSVMHGFMALKHHFIDKDDTLKRMLGKSSSDYGV
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSFTNTPERYGVISAAFHWLSAIIVYGMFALGLWMVTLSYYDGWYHKAPELHKSIGILLMMGLVIRVLWRVISPPPGPLPSYSPMTRLAARAGHLALYLLLFAIGISGYLISTADGKPISVFGWFDVPATLADAGAQADFAGALHFWLAWSVVVLSVMHGFMALKHHFIDKDDTLKRMLGKSSSDYGV
CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSFTNTPERYGVISAAFHWLSAIIVYGMFALGLWMVTLSYYDGWYHKAPELHKSIGILLMMGLVIRVLWRVISPPPGPLPSYSPMTRLAARAGHLALYLLLFAIGISGYLISTADGKPISVFGWFDVPATLADAGAQADFAGALHFWLAWSVVVLSVMHGFMALKHHFIDKDDTLKRMLGKSSSDYGV
55233223310100000000000000000000111111222221122002002000000000000000020013212123211201200010000000000000000000011122220100011201111231120020001001000000000000000000100001222001210033223324
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSFTNTPERYGVISAAFHWLSAIIVYGMFALGLWMVTLSYYDGWYHKAPELHKSIGILLMMGLVIRVLWRVISPPPGPLPSYSPMTRLAARAGHLALYLLLFAIGISGYLISTADGKPISVFGWFDVPATLADAGAQADFAGALHFWLAWSVVVLSVMHGFMALKHHFIDKDDTLKRMLGKSSSDYGV
1	PROSPECT2	1t33A	0.091	0.936	1.135	threading_1	MNIPTTTTKGEQAKSQLIAAALAQFGEYGLTRDIAALAGQNIAAKEDLYLACAQWIADFLGEKFRPHAEKAERLFSQPAPDRDAIRELILLACKNMIMLLEDTVNLSKFISREQLSPTSAY------------QLVHEQVIDPLHTHLTRLVAAYTTHALLGEVLAFRLGKETILLRTGWPQFDEEKA
2	HHPRED-l	1kqf_C	0.161	0.894	4.946	threading_2	-SKSKMIVRTKFIDRACHWTVVICFFLVALSGISFFFPTLTFGTPQMGRILHPFFGIAIFVALMFMFVRFVHHNIPDKKDIPWLLNNAGQKMMFWSIMSMIFVLLVTGVIIWR------------PYF-AQYFPMQVVRYSLLIHAAAGIILIHAILIHMYMAFWV-----KGSIKGMIEKVSRRWA-
3	HHPRED-g	1kqf_C	0.162	0.888	5.572	threading_3	-SKSKMIVRTKFIDRACHWTVVICFFLVALSGISFFFPTQTFGTPQMGRILHPFFGIAIFVALMFMFVRFVHHNIPDKKDI--PWLLAGQKMMFWSIMSMIFVLLVTGVIIW------------RPYF-AQYFPMQVVRYSLLIHAAAGIILIHAILIHMYMAFWV-----KGSIKGMIEGKVSRRWA
4	PROSPECT2	3a0oA3	0.106	1.000	1.052	threading_4	RPVMPEPQPYLWRQMYIDCQEVIYAIRHLAIAGRVLGSRAYNDEAGFRVVVALAWGYDWLLERTREVADHVIAHARIHVFPYDSHAVRSLSAMTGMAYLIEAANLIRRFPLYTKAPGTRRANFGDDSTLGDLPGLKLGYNVRQFAGVTGNGHYQWYFDHIKADAFYNYGWWDLNFDDLVEAVSPADLP
5	HHPRED-g	1kqf_C	0.182	0.527	1.046	threading_5	------------------------------------------------------------------------SKSKMIVR-TK----FIDRACHWTVVICFFLVALSGISFFFPTL------------QWLTQTFGTPQMGRILHPFFGIAIFVALMFMFVRFVHHNIPDKKDIPWLLKGNEHADVGK
6	MUSTER	1kqfC	0.185	0.862	0.846	threading_6	-SKSKMIVRTKFIDRACHWTVVICFFLVALSGISFFFLTQTFGTPQMGRILHPFFGIAIFVALMFMFVRFVHHNIPGNEHKVADVGKAGQKMMFWSIMSMIFVLLVTGVII-----RPY-FAQYFP--------MQVVRYSLLIHAAAGIILIHAILIHMYMAFWV-----KGSIKGMI------EGK
7	SPARKS	1kqfc	0.158	0.878	0.877	threading_7	-SKSKMIVRTKFIDRACHWTVVICFFLVALSGISFFFPTLQWLTPQMGRILHPFFGIAIFVALMFMFVRFVHHNIPGNEHKVADVGKYNAGQKMMFWSIMSMIFVLLVTGVIIWRPYFAQYFP-----------MQVVRYSLLIHAAAGIILIHAILIHMYMAFW-----VKGSIKGMI------EGV
8	PROSPECT2	3rm5A2	0.084	0.947	0.983	threading_8	IPHPKVKPHWDSYKKFQFFIEQDYAYLVDYARVHCIAGSKAPCLEDMEKELVIVGGVRTEMGQHEKRLKEVFGVKDPDYFQKIKRGPALRAYSRYFNDVLVASLTPCLMGYGEALTKMKGKVTAPEGSVYHEASSWYREAMDEGEKLLNHILLDTLVTIYAEVCELET----NFWTAALEYE------
9	PPA-I	1kqfC	0.172	0.899	0.814	threading_9	-SKSKMIVRTKFIDRACHWTVVICFFLVALSGISFFFLTQTFGTPQMGRILHPFFGIAIFVALMFMFVRFVHHNIPD--KKDIPWLLNIVEVLKGAGQKMMFWSIMSMIFVLLVTG--VIIWRPYFAQYF---PMQVVRYSLLIHAAAGIILIHAILIHMYMAFWV-----KGSIKGMI------EGK
10	HHPRED-l	1q16_C	0.151	0.883	0.721	threading_10	SQLDRKGM--NLASNLFHIGILGIFVGHFF-GMLTPHWELPIEVKQKMAMFAGGSGVLCL-IGGVLLLKRRLFSPR---------VRATTTGADILILSLLVIQCALGLLTIPFSADGSEMQSVVTFHGGASQHLDGVAFIFRLHLVLGMTLFLLFPIHIWSVPVEYLTRKYQLVRA-----RH----

Predicted Tertiary Structure


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TM-score=0.836 to 1t33A SCOP code=a.4.1.9	TM-score=0.799 to 1kqfC SCOP code=f.21.1.1	TM-score=0.772 to 1kqfC SCOP code=f.21.1.1	TM-score=0.473 to 1j0nA SCOP code=a.102.3.2	TM-score=0.500 to 1b04B SCOP code=d.142.2.2