Template-based Modeling Results for YCFQ_ECOLI


  Submitted Primary Sequence

>Length 210
MATDSTQCVKKSRGRPKVFDRDAALDKAMKLFWQHGYEATSLADLVEATGAKAPTLYAEFTNKEGLFRAVLDRYIDRFAAKHEAQLFCEEKSVESALADYFAAIANCFTSKDTPAGCFMINNCTTLSPDSGDIANTLKSRHAMQERTLQQFLCQRQARGEIPPHCDVTHLAEFLNCIIQGMSISAREGASLEKLMQIAGTTLRLWPELVK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MATDSTQCVKKSRGRPKVFDRDAALDKAMKLFWQHGYEATSLADLVEATGAKAPTLYAEFTNKEGLFRAVLDRYIDRFAAKHEAQLFCEEKSVESALADYFAAIANCFTSKDTPAGCFMINNCTTLSPDSGDIANTLKSRHAMQERTLQQFLCQRQARGEIPPHCDVTHLAEFLNCIIQGMSISAREGASLEKLMQIAGTTLRLWPELVK
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MATDSTQCVKKSRGRPKVFDRDAALDKAMKLFWQHGYEATSLADLVEATGAKAPTLYAEFTNKEGLFRAVLDRYIDRFAAKHEAQLFCEEKSVESALADYFAAIANCFTSKDTPAGCFMINNCTTLSPDSGDIANTLKSRHAMQERTLQQFLCQRQARGEIPPHCDVTHLAEFLNCIIQGMSISAREGASLEKLMQIAGTTLRLWPELVK
553332322322312232221310021003001320131000110031030201001110211100011002100220012011201133310310012001100201223322200000100021133123002103210210130012002212332312341102100200000010000002222223201200110131023115
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMATDSTQCVKKSRGRPKVFDRDAALDKAMKLFWQHGYEATSLADLVEATGAKAPTLYAEFTNKEGLFRAVLDRYIDRFAAKHEAQLFCEEKSVESALADYFAAIANCFTSKDTPAGCFMINNCTTLSPDSGDIANTLKSRHAMQERTLQQFLCQRQARGEIPPHCDVTHLAEFLNCIIQGMSISAREGASLEKLMQIAGTTLRLWPELVK
1MUSTER3eupA0.1890.9572.261threading_1-------QAMKELSK-SDRTRQFIIESTAPVFNVKGLAGTSLTDLTEATNLTKGSIYGNFENKEAVAIAAFDYNWGHVKSVLTAKVQACN-TYKEMLLVYSSMYNDADGSLFPVGGCPLLNTTIEADDTHDALRKKAGEAILSWKKNLVTIIKKGIQAKEFRPDTDVTKIAFSMIALVEGAILIHRATKNRAYSDYVFESLEDLIAGIVK
2SPARKS3qbma0.1980.9142.826threading_2-------------GRKGQETRERVVAQAAALFNVSGYAGTAISDIAA-TGLEKGGIYRHFESKEQLALAAFDYAAEKVRERFAVGL-AGHKHTVDTIIAFLDVFRSYAERPPLVGGCPILNTAIESDDTNP-LRERVRAVIDEWRETIRTLVQTGIARGEIRPEVDADRLALLIIA--TEGAVLARILETATPLEHAYTHLATYITQQVR
3PROSPECT23eupA0.1790.9572.760threading_3--------QAMKELSKSDRTRQFIIESTAPVFNVKGLAGTSLTDLTEATNLTKGSIYGNFENKEAVAIAAFDYNWGHVKSVLTAKV-QACNTYKEMLLVYSSMYNDADGSLFPVGGCPLLNTTIEADDTHDALRKKAGEAILSWKKNLVTIIKKGIQAKEFRPDTDVTKIAFSMIALVEGAILIHRATKNRAYSDYVFESLEDLIAGIEK
4PPA-I3eupA0.1740.9571.972threading_4--------QAMKELSKSDRTRQFIIESTAPVFNVKGLAGTSLTDLTEATNLTKGSIYGNFENKEAVAIAAFDYNWGHVKSVLTAKVQ-ACNTYKEMLLVYSSMYNDADGSLFPVGGCPLLNTTIEADDTHDALRKKAGEAILSWKKNLVTIIKKGIQAKEFRPDTDVTKIAFSMIALVEGAILIHRATKNRAYSDYVFESLEDLIAGIEV
5HHPRED-l3bru_A0.1720.8861.630threading_5-----------------SLAHQSLIRAGLEHLTEKGYSSVGVDEILKAARVPKGSFYHYFRNKADFGLALIEAYDTYFARLLDQAFLDGSLAPLARLRLFTR-AEEG-ARHGFRRGCLVGNLGQE-GALPDDFRAALIGVLETWQRRTAQLFREAQACGELSADHDPDALAEAFWIGWEGAILRAKLELRPDPLHSFTRTFGRHFV----
6HHPRED-g2i10_A0.3120.8241.736threading_6-------------------DDQVALQTA-ELFWRQGYEGTSITDLTKALGINPPSLYAAFGSKRDLFEKTLDRY-CERTLQLEEA-V--RPTAHEAVLDFLTGRVEVFT------GC-TVQAGLASGEPHHEIVDLLTAAREQ-RQTVLDRFEKALADGDLPAGTDCTALARYV-AAVYGLSVEAASGAPREELTAAAILAAQVVP----
7SP33qbma0.2030.9142.915threading_7-------------GRKGQETRERVVAQAAALFNVSGYAGTAISDIAA-TGLEKGGIYRHFESKEQLALAAFDYAAEKVRERFAVGL-AGHKHTVDTIIAFLDVFRSYAERPPLVGGCPILNTAIESDDTNP-LRERVRAVIDEWRETIRTLVQTGIARGEIRPEVDADRLALLIIA-TEGA-VLARILETATPLEHAYTHLATYITQQVR
8SAM-T992i10B0.2930.8292.358threading_8---------------------DQVALQTAELFWRQGYEGTSITDLTKALGINPPSLYAAFGSKRDLFEKTLDRYCERTLQLEEAVR----PTAHEAVLDFLTGRVEVFTGQPF--GCTVQAGLASPHHEIVDLLTAAREQRQTVLDRFEKALAD----GDLPAGTDCTALARYVAAV-YGLSVEAASGAPREELTAAAILAAQVVP----
9MUSTER2hyjA0.1450.9192.170threading_9-------------AEAQA-TRGRILGRAAEIASEEGLDGITIGRLAEELEMSKSGVHKHFGTKETLQISTLDKAFVDFWHRVVEPA-LAEPPGLRRLRAVCANSVGYLEEPLLPGGCLLTAALSEYDGRPGRVRDAVAEVWSRWREQLRADLTAAVDKGELPAGFDVEQALFEIVAAGLALNAAMQLQHDRTAADRARRAIERALAQS--
10SPARKS3eupa0.1790.9572.555threading_10-------QAMKELSKSDR-TRQFIIESTAPVFNVKGLAGTSLTDLTEATNLTKGSIYGNFENKEAVAIAAFDYNWGHVKSVLTAKV-QACNTYKEMLLVYSSMYNDADGSLFPVGGCPLLNTTIEADDTHDALRKKAGEAILSWKKNLVTIIKKGIQAKEFRPDTDVTKIAFSMIALVEGAILIHRATKNRAYSDYVFESLEDLIAGIEV

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.798 to 2hyjA
SCOP code=a.4.1.9
TM-score=0.807 to 2hyjA
SCOP code=a.4.1.9
TM-score=0.821 to 2hyjA
SCOP code=a.4.1.9
TM-score=0.800 to 2hyjA
SCOP code=a.4.1.9
TM-score=0.801 to 2hyjA
SCOP code=a.4.1.9