Template-based Modeling Results for YCJX_ECOLI


  Submitted Primary Sequence

>Length 465
MKRLKNELNALVNRGVDRHLRLAVTGLSRSGKTAFITAMVNQLLNIHAGARLPLLSAVREERLLGVKRIPQRDFGIPRFTYDEGLAQLYGDPPAWPTPTRGVSEIRLALRFKSNDSLLRHFKDTSTLYLEIVDYPGEWLLDLPMLAQDYLSWSRQMTGLLNGQRGEWSAKWRMMSEGLDPLAPADENRLADIAAAWTDYLHHCKEQGLHFIQPGRFVLPGDMAGAPALQFFPWPDVDTWGESKLAQADKHTNAGMLRERFNYYCEKVVKGFYKNHFLRFDRQIVLVDCLQPLNSGPQAFNDMRLALTQLMQSFHYGQRTLFRRLFSPVIDKLLFAATKADHVTIDQHANMVSLLQQLIQDAWQNAAFEGISMDCLGLASVQATTSGIIDVNGEKIPALRGNRLSDGAPLTVYPGEVPARLPGQAFWDKQGFQFEAFRPQVMDVDKPLPHIRLDAALEFLIGDKLR
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKRLKNELNALVNRGVDRHLRLAVTGLSRSGKTAFITAMVNQLLNIHAGARLPLLSAVREERLLGVKRIPQRDFGIPRFTYDEGLAQLYGDPPAWPTPTRGVSEIRLALRFKSNDSLLRHFKDTSTLYLEIVDYPGEWLLDLPMLAQDYLSWSRQMTGLLNGQRGEWSAKWRMMSEGLDPLAPADENRLADIAAAWTDYLHHCKEQGLHFIQPGRFVLPGDMAGAPALQFFPWPDVDTWGESKLAQADKHTNAGMLRERFNYYCEKVVKGFYKNHFLRFDRQIVLVDCLQPLNSGPQAFNDMRLALTQLMQSFHYGQRTLFRRLFSPVIDKLLFAATKADHVTIDQHANMVSLLQQLIQDAWQNAAFEGISMDCLGLASVQATTSGIIDVNGEKIPALRGNRLSDGAPLTVYPGEVPARLPGQAFWDKQGFQFEAFRPQVMDVDKPLPHIRLDAALEFLIGDKLR
CHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEEEEEEEEEEEECHHHHHCCCCCCEEEEEEECCCCHHHHCCHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCHHHEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEEECCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCEEEEECCEEEEEEECEECCCCCEEEECCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MKRLKNELNALVNRGVDRHLRLAVTGLSRSGKTAFITAMVNQLLNIHAGARLPLLSAVREERLLGVKRIPQRDFGIPRFTYDEGLAQLYGDPPAWPTPTRGVSEIRLALRFKSNDSLLRHFKDTSTLYLEIVDYPGEWLLDLPMLAQDYLSWSRQMTGLLNGQRGEWSAKWRMMSEGLDPLAPADENRLADIAAAWTDYLHHCKEQGLHFIQPGRFVLPGDMAGAPALQFFPWPDVDTWGESKLAQADKHTNAGMLRERFNYYCEKVVKGFYKNHFLRFDRQIVLVDCLQPLNSGPQAFNDMRLALTQLMQSFHYGQRTLFRRLFSPVIDKLLFAATKADHVTIDQHANMVSLLQQLIQDAWQNAAFEGISMDCLGLASVQATTSGIIDVNGEKIPALRGNRLSDGAPLTVYPGEVPARLPGQAFWDKQGFQFEAFRPQVMDVDKPLPHIRLDAALEFLIGDKLR
443133202200320022200000000142110000000001002122122011011133310100211123212012020120012011321211322320010001020202310132133201000100101010001000012101100310001032321300230020032023223132310110020012001102431021021010002121210100100101323222323223233220001022102200332031002300230121000000010022013002201300130020012122200120012101100000030120012102101200220022013102221020100000001012311022322302001013133211000111301230113221233212032120321323320110201000211122324
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMKRLKNELNALVNRGVDRHLRLAVTGLSRSGKTAFITAMVNQLLNIHAGARLPLLSAVREERLLGVKRIPQRDFGIPRFTYDEGLAQLYGDPPAWPTPTRGVSEIRLALRFKSNDSLLRHFKDTSTLYLEIVDYPGEWLLDLPMLAQDYLSWSRQMTGLLNGQRGEWSAKWRMMSEGLDPLAPADENRLADIAAAWTDYLHHCKEQGLHFIQPGRFVLPGDMAGAPALQFFPWPDVDTWGESKLAQADKHTNAGMLRERFNYYCEKVVKGFYKNHFLRFDRQIVLVDCLQPLNSGPQAFNDMRLALTQLMQSFHYGQRTLFRRLFSPVIDKLLFAATKADHVTIDQHANMVSLLQQLIQDAWQNAAFEGISMDCLGLASVQATTSGIIDVNGEKIPALRGNRLSDGAPLTVYPGEVPARLPGQAFWDKQGFQFEAFRPQVMDVDKPLPHIRLDAALEFLIGDKLR
1PROSPECT21w36B10.1120.9011.305threading_1MSDVAETLDPLRLPLQGERL---IEASAGTGKTFTIAALYLRLL-LGLGGSAAFPRPLTVEELLVVTFTEAATA-----ELRGRIRSNI-------------------------HELRIACLRE--------TTDNPLYERLLEEIDDKAQAAQWLLLAERQMDERMLNLNAFESGMLFEQQLIEDE--SLLRYQACADFWRRHCYPLPREIAQVVFETWKGPQALLRDINRYLQGEAPVIKAPPPDIRDLVITRALAEIRETVAREKRRRGEVLAAAIRTRFPVAMIDEFQDTDPQQYRIFRRTYMKARSEVHAWRSNSVNKLFSQTDDAKMWLMEGESCGVGDYQSTMAQVCAAQIRDWLQAGQ--RGEALLMNGDDARPVRPSVYLSNRDRLEVTIHKSKGLEYPLVWLPFTNFRVQEQAFYHDRHSFEAVLDLNARRRGDKKGDTDVHQSALGRLLQKGEP
2PPA-I3szrA10.1350.6841.044threading_2VRPCIDLIDSLRALGVEQDLAIAVIGDQSSGKSSVLEALSG--VAVTRCPLVLKLKKLVNEDKWRGKVSYQIEIS----DASEVEKEINKAQNAIAGEGMGISHELITLEISS----------RDVPDLTLIDLPG---GNQP---ADIGYKIKTLIKKYIQRQETI------SLVVVPSNVDIATTEALSMAQEVDPEGDRTILTKPDLVDKGT-----EDKVVDVVLVFHLKKMIVKCRGQQEIQDQLSLSEALQREKIFFENHPYFRDLLEEGKPC-----LAEKLTSELITCKSLPLLENQIKETHQR----ITEELQKYGVDIPERSD---------TSDKRKFLKERLARLTQARRRLAQFPG------------------------------------------------------------------------------------------------
3PROSPECT21l5aa0.0810.8281.274threading_3MLLAQKPFWQRHLAYPHINTVAHSLRLTGPLDTTLLLRALHLTVSESAQGELYWHPFSPPIDYQ---------DLSIHLEAEPLAWRQIEQDLQRSSTLIDAPITSHQVYRLSH--------SEHLIYTRAHHIVLGYGMML-FEQRLSQHYQSLLSGQTPTAAFKPYQSYLEEEAAYLTS--------HRYWQDKQFWQGYLREAPDLTLTSAT---YDPQLSHAVSLSYTLNSQLNHLLLKLANANQIGWPDALVALCALYLESAEPSVAANVPGLMVNSLPLLRLSAQQTSLGNYLKQSGQAIRSLYLHGRYRIEQIEQDQGLNAEQSYFINILPFESPH-----------------------FADCQTELKVLA-----------SGSAEGINFTFRGSPQHELCLDI--TADLASYPQSHWQSHCERFPRF---------------FEQLVARLLAEPAA
4PROSPECT21e9ra0.1020.7611.266threading_4VGQSGGKLKRMTREKAKQVTVLLVNGATGTGKSVLLRELAYTGLLRGD---------------------------------------------------------RMVIVDPNGDMLSKFGRDKDIILNPYDQRTKGWSF-------------------FNEIRNDYDWQRYALSVVPRGKTDEAEEWASYGRLLLRETAKKLALIGTPSMRELFHWTTIATFDDLRGFLEGTLAESLFAGSNEASKALTSARFVLSDKLPEHVTMPDGDFSIRSWLEDPNGGNLFITW-----REDMGPALRPLISAWVDVV----CTSILSLPEEPKRRLWLFIDELASLEKLASADALTKLDDVYGVKEAQTLRASFRSLVVLGGSRSLGEHEVERDRALERVRERVVMLPDLTAYVGFAGNRP---------------IAKVPLEIKQFANRQPAF-----------VEGT
5PROSPECT22xheA0.0790.9481.218threading_5HMSLKSAVKTVLTNSLRS------VADGGDWKVLVVDKPALRMIS-----ECARMSEILDLGVTVVEDVSKQRKVLPQFPTEENLDYVIRD---FADRTPTYEAAHLFFLSPVPDALMAKLASAKKYVKTLKEINTLFIPRVFTLNEPHGLVQYYGSRSSSYNIDHLVRRLSTLCTTMNVASSTSTPGTERMAMQLQKEIDMSVSQGLINAREDIYSYSTVDAGGREQQRQVVLGEDDDIWLQMRHLHISEVFRKVKSSFDEFCVSARRPQHREQMQKYSLHLDMSNAINMAFS--STIDSCTKAEQNIVTEEEQDGNKVRDFI--GEVASVV----VDRRVSTEDKLRCLMLCVLAKHELNNLLDNANIATPSRSIYNLEMLGATVVADRRGRKPKTMKRIERDMPYV--LSRWTPEYIATGQLDLESYPAVRDGPSVVQPKESAKPKLYNEIRCAYEVSQSSK
6PROSPECT23qxyA0.1020.7591.199threading_6LDPVACFLSWCRRVGLELSPKVAVSRQGTVAGELLFVVPRAALLSQHTCSIGGLLERERV----------ALQSQSGWVPLLLALHELQAPASRW---------------------RPYFALWPELGRLEHPMFWPEEERRCLLQGTGVPEAVEKDLANIR---SEYQSIVLPFMEAHPDLFSLRVRSLELYHQLVALVMAYSFQEPLEKEPNSPVMVPAHLANHNANLEYSANCLRMVATQPIPKGHQMANWQLIHMAERHLVYERWDFLCKLEMVGEEGAFVIG-------REEVLTEEELTTTLKVLC----MPAEEFRELKDQKREEGSLTITNIPKLKASWRQLLQNSVLLTL-------------------------------------------------------QTYATDLKTDQGLLSNKEVYAKLSW------------REQQALQVRYGELTS
7MUSTER3qxyA0.1230.8240.641threading_7LDPVACFLSWCRRVGLSPKVAVSRQG-TVAGYGMVAR------------------ESVQAGELL-FVV-P-RAALLSQHTCS--IGGLLERERVALQSQSGWVPLLLALLHELQRPYFALWPELGRLEH-PMFWP-EEERRCLLQGTGVPEAVEKDLANIRSEYQSIVLPFMEAHPDLFSLRVRS---LELYHQLVALVMAYSFQEPLEKEPNSPVMVPA----ADILNHLANHNANLEYSANTQPIPKGHEI------FNTYGQMANWQLIHMYFVEPYPDTADIQ-MVTVREAALQGTKTEAERHLVYERW-----DFLCKL--MVGEEGAFVIGREEVLT---EEELTTTLKVLCAEEFRELKDQKREEGSLTITNIPKLKASWRQ-----QNSVL-LTLQT------YATDL-GLLSNKEVYAK------------LSW-------REQQALQVRYGQKLH
8SPARKS3auxa0.1080.7160.966threading_8LKEIRNNFKSHVNSRIKEKGIVAIIGENGSGKSSIFEAVFFALFGAGSNFNYDTIIT-KGKKSVYVELD---------FEVNG-------------------NNYKIIREYDSGRGGAKLYKNGKPYTISAVN---KAVN--EILGVDRNMFLNEIAKFLSLKPSEKLETVAKLL-GIDEFEKCYQKMGEIVKEYEKRLERIEKEKLTKFVE-------------YLDK-----VRRIFGRNGFQAYLREKYVPLIQKYLNEAFSEFDLP-YSFVELTKDFEVRVHAPNGVLT--IDNLSGGEQIAVALSLRL-----AIANALIGNRVE-CIILDEPTVYLDENRRAKLAEIFRKV------------KSIPQMIIIT---HHRELE----DVADVIINVKKDGNVSKVKING---------------------------------------------------
9PROSPECT21p49A0.0790.8971.188threading_9AAS-------------RPNIILVMARLASGGRAAFMTGRYPVRSGMASWSRTGVFLFT----------ASSGGLPTDEITFAKLLKDQWHLGMSCHSKTDF------------CHHPLHHGFN----YFYGISLTNLRDCKPGEGSVFTTGFKRLVFLPLQIVGVTLLTLAALNCLGLLHVPLGVFFSLLFLAALILTLFLGFLHYCFMMRNYEIIQQPMSYDNLTQRLSYLHVHTALFSSKDFAGKSQHGVYGDAVEEMDWSVGQILNLL--DELRLANDTLIYFTSDQGAHVE--EVSSKGEIHGGSNGIYKGGKANNWEGGI-----RVPGILRWPRVIQAGQKIDFPTVAKLAGAPLPEDRIIDGRDLMPLLEGKSQRSDHEFLYCNAYLNAVRWHPQNSTSIWKAFFFTPNFNPVCFATHVCFCFGSYVTHHDPPLTPASEPRFYEILKVMQEAADRHTQ
10PPA-I1fnnA0.1130.6450.989threading_10LQQLDILLGNWLRNPGHHYPRATLLGRPGTGKTVTLRKLWELYKDKTT---------------ARFVYINGFIYRNFTAIIGEIARSLNIPFPRRGLSRDEF--------LALLVEHLRERDLYMFLVLDDAFNLAPDILSIRLGQEAVLNNLDPSTRGIMGKYDQIFDILLDRAKAGLAEGSYSEDILQMIADITG----------------------------------------AQTPLDTNRGDARLAIDILYRSAYAAQQNGRKHIAPEDVRKSSKEVLFGISEEVLIGLPLHEKLFLLAIVRSLKISHTPYKIVCEEYGERPRVHETRQNTTLISIGTEPLDTLEAVITKLIKEELR------------------------------------------------------------------------------------------------------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.539 to 1w36E
SCOP code=c.37.1.19
TM-score=0.680 to 1jx2B
SCOP code=c.37.1.8
TM-score=0.691 to 1l5aA
SCOP code=c.43.1.2
TM-score=0.720 to 1e9sF
SCOP code=c.37.1.11
TM-score=0.627 to 1mqsA
SCOP code=e.25.1.1