Template-based Modeling Results for YDGH_ECOLI


  Submitted Primary Sequence

>Length 314
MKLKNTLLASALLSAMAFSVNAATELTPEQAAAVKPFDRVVVTGRFNAIGEAVKAVSRRADKEGAASFYVVDTSDFGNSGNWRVVADLYKADAEKAEETSNRVINGVVELPKDQAVLIEPFDTVTVQGFYRSQPEVNDAITKAAKAKGAYSFYIVRQIDANQGGNQRITAFIYKKDAKKRIVQSPDVIPADSEAGRAALAAGGEAAKKVEIPGVATTASPSSEVGRFFETQSSKGGRYTVTLPDGTKVEELNKATAAMMVPFDSIKFSGNYGNMTEVSYQVAKRAAKKGAKYYHITRQWQERGNNLTVSADLYK
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKLKNTLLASALLSAMAFSVNAATELTPEQAAAVKPFDRVVVTGRFNAIGEAVKAVSRRADKEGAASFYVVDTSDFGNSGNWRVVADLYKADAEKAEETSNRVINGVVELPKDQAVLIEPFDTVTVQGFYRSQPEVNDAITKAAKAKGAYSFYIVRQIDANQGGNQRITAFIYKKDAKKRIVQSPDVIPADSEAGRAALAAGGEAAKKVEIPGVATTASPSSEVGRFFETQSSKGGRYTVTLPDGTKVEELNKATAAMMVPFDSIKFSGNYGNMTEVSYQVAKRAAKKGAKYYHITRQWQERGNNLTVSADLYK
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCEEEECEEECCHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCEECCCCCCCHHCCEEEECCCCCCCEEEECCCCCEEEECCHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEEEECCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MKLKNTLLASALLSAMAFSVNAATELTPEQAAAVKPFDRVVVTGRFNAIGEAVKAVSRRADKEGAASFYVVDTSDFGNSGNWRVVADLYKADAEKAEETSNRVINGVVELPKDQAVLIEPFDTVTVQGFYRSQPEVNDAITKAAKAKGAYSFYIVRQIDANQGGNQRITAFIYKKDAKKRIVQSPDVIPADSEAGRAALAAGGEAAKKVEIPGVATTASPSSEVGRFFETQSSKGGRYTVTLPDGTKVEELNKATAAMMVPFDSIKFSGNYGNMTEVSYQVAKRAAKKGAKYYHITRQWQERGNNLTVSADLYK
43211011000000000000100220133102313311100010212012200410031035331200000001222321201000100213143043221100100120133112302211001020013121301200020043331200000010003321221000000243143221312310111130010001221311331202000122222231010012222422211020241220120231002201210101010011221201120022035320200000110255232010101135
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMKLKNTLLASALLSAMAFSVNAATELTPEQAAAVKPFDRVVVTGRFNAIGEAVKAVSRRADKEGAASFYVVDTSDFGNSGNWRVVADLYKADAEKAEETSNRVINGVVELPKDQAVLIEPFDTVTVQGFYRSQPEVNDAITKAAKAKGAYSFYIVRQIDANQGGNQRITAFIYKKDAKKRIVQSPDVIPADSEAGRAALAAGGEAAKKVEIPGVATTASPSSEVGRFFETQSSKGGRYTVTLPDGTKVEELNKATAAMMVPFDSIKFSGNYGNMTEVSYQVAKRAAKKGAKYYHITRQWQERGNNLTVSADLYK
1PROSPECT21s8eA0.1050.9081.288threading_1MKFHKPQREEEFAEAFKNALEIAVQEN---------VDFILIAGSSRPSPGTLKKAIAIPKEHSIPVFAIEGNLVRTQRGPSVLNLLEDFGLVYVIGMRKEKVENESERLGNGEYLVKGVYKDLEIHGMKYMSSAWFEANKEILKRLF------------RPTDNAILMLHQGVREVSEARGEDYFEIG------LGDLPEGYLKRYETSYSGSPSLERWDFGDYEVRYEWDGIKFKERYGVNKGFYIVEDFKPRFVEIKVRPFIDVKIKGS--EEEIRKAIKRLIPLIPKYVRLNIGWRKPFDLYLKIDTWRI
2SPARKS2jnaa0.2320.3151.365threading_2MK-KRIIAAALLATVASFSTLAAEQVSKQEISKLVKVGTINVSQSGGSPSDLREKLSELADAKGGKYYHIIAAREHG--PNFEAVAEVYN-DATKLEHHHHHH-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3PROSPECT23e4oA0.1400.7261.277threading_3AGLAGQSRIDASLKASLLRAVVERQRAPLVLADDAAIRGALLSPDRPSLDRINRKLEALATSAEAAVIYLID-----RSGVAVAA----------SNWQEPTSFVGNDYAFRDYFRLAVRDGAEHFAGTVSKRPGLYDGVEADWQASGKPAYVT------DRRGI-----VLITSLPSWRFTTKPI-----AEDRLAPIRESLQ-----------FGDAPLLPLPFRKIEARPDGSSTLDALLPG------------------------------------------DSTAAFLRVETVPSTNWRLEQLSPL--
4PPA-I2jnaA0.2320.3151.228threading_4MK-KRIIAAALLATVASFSTLAAEQVSKQEISHFKLINVSQSGGQISSPSDLREKLSELADAKGGKYYHIIAARE--HGPNFEAVAEVY-NDATKLEHHHHHH-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5PROSPECT21fc6a0.0750.9361.270threading_5VTSEQLLFLEAWRAVDRFNGQSWFKLRETYLKKEP------------DRRAQTYDAIRKLAVLDDPFTRFLERRGTAGSVTGVGLEITYDGGSG-----KDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGSLYDVSDLLQGEADSQVEVVLHQLTRQKVTINPVTFTTCSNVAAAALPPGAAKLATFNSNTTAAAQQAFTELSKQGVAGLVRNNGGGLFPAGVNVARLVDRGDLVLIADSQGIRDIYSADGNSIDSATPLVVLVNRGTAS---ASEVLAGALKDSKRGLIAVVDLSDGSGVAVTVARYQT
6HHPRED-l2jna_A0.1720.3155.648threading_6MKK-RIIAAALLATVASFSTLAAEQVSKQEISKLVKVGTINVSQSGSSPSDLREKLSELADAKGGKYYHIIAAREH--GPNFEAVAEVYNDATKLEHHHHHH--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7PROSPECT21ii7a0.1230.8821.248threading_7MKFHKPQREEEFAEAFKNALEIAVQEN---------VDFILIASSRPSPGTLKKAIAQIPKEHSIPVFAIEGNHDRTQRGPSVLNLYVIGMRKEKVENEYLTS----ERLGNGEYLVKGVYKDLEIHGMKYMSSAWFEANKEILKRLF------------RPTDNAILMLHQGVREVSEARGEDYFEIG------LGDLPEGYLKRYETSYSGSPSLERWDFGDYEVFKERYGVNKGFYIVEDFKPRFVEIK------VRPFIDVKIKGSEEEIRKAIKRLIPLIPKNAYVRLNIGTEIKELLNVEYLKIDTWR
8HHPRED-g2jna_A0.1720.3155.552threading_8MKKRII-AAALLATVASFSTLAAEQVSKQEISKLVKVGTINVSQSGSSPSDLREKLSELADAKGGKYYHIIAAREH--GPNFEAVAEVYNDATKLEHHHHHH--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9MUSTER1s8eA0.1160.9330.553threading_9MKF---AHLA-KPQREEEFAEAFKNA-LEIAVQEN-VDFILIAGPSPGTLKKAIALLQIPKEHSIPVFAIEGNLVRTQRGP--SVLNLLEDFGLMRKEKVENEYLTSERLGNGEYLVKGVYKDLEIHGMKYMSSAWFEANKEILKRLFRPTDNAILMLHQGVRE-------VSEARGEDYFEIGLGDLPEGYL----YYALGHIKRYETSYSGVVYPGSLRWDFGDYEVRYEWDGIKFKERYGVGFYIVEDFKPRFVEIKVRPFIDVKIK-GSEEEIRKAIKRLIPLIPKNYVRLNIGWRKPFDL-LLNVEYLK
10SP32jnaa0.2320.3151.185threading_10MK-KRIIAAALLATVASFSTLAAEQVSKQEISKLVKVGTINVSQQISSPSDLREKLSELADAKGGKYYHIIAAREHG--PNFEAVAEVYN-DATKLEHHHHHH-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.703 to 1s8eA
SCOP code=d.159.1.4
TM-score=0.502 to 2jnaA
SCOP code=d.230.6.1
TM-score=0.579 to 2p7jB
SCOP code=d.110.6.2
TM-score=0.424 to 2jnaA
SCOP code=d.230.6.1
TM-score=0.588 to 1fcfA
SCOP code=b.36.1.3