Template-based Modeling Results for YDHB_ECOLI

Submitted Primary Sequence

>Length 310
MWSEYSLEVVDAVARNGSFSAAAQELHRVPSAVSYTVRQLEEWLAVPLFERRHRDVELTAAGAWFLKEGRSVVKKMQITRQQCQQIANGWRGQLAIAVDNIVRPERTRQMIVDFYRHFDDVELLVFQEVFNGVWDALSDGRVELAIGATRAIPVGGRYAFRDMGMLSWSCVVASHHPLALMDGPFSDDTLRNWPSLVREDTSRTLPKRITWLLDNQKRVVVPDWESSATCISAGLCIGMVPTHFAKPWLNEGKWVALELENPFPDSACCLTWQQNDMSPALTWLLEYLGDSETLNKEWLREPEETPATGD
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MWSEYSLEVVDAVARNGSFSAAAQELHRVPSAVSYTVRQLEEWLAVPLFERRHRDVELTAAGAWFLKEGRSVVKKMQITRQQCQQIANGWRGQLAIAVDNIVRPERTRQMIVDFYRHFDDVELLVFQEVFNGVWDALSDGRVELAIGATRAIPVGGRYAFRDMGMLSWSCVVASHHPLALMDGPFSDDTLRNWPSLVREDTSRTLPKRITWLLDNQKRVVVPDWESSATCISAGLCIGMVPTHFAKPWLNEGKWVALELENPFPDSACCLTWQQNDMSPALTWLLEYLGDSETLNKEWLREPEETPATGD
CCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHCCEEEEECCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCHHHHCCCCEEEECCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MWSEYSLEVVDAVARNGSFSAAAQELHRVPSAVSYTVRQLEEWLAVPLFERRHRDVELTAAGAWFLKEGRSVVKKMQITRQQCQQIANGWRGQLAIAVDNIVRPERTRQMIVDFYRHFDDVELLVFQEVFNGVWDALSDGRVELAIGATRAIPVGGRYAFRDMGMLSWSCVVASHHPLALMDGPFSDDTLRNWPSLVREDTSRTLPKRITWLLDNQKRVVVPDWESSATCISAGLCIGMVPTHFAKPWLNEGKWVALELENPFPDSACCLTWQQNDMSPALTWLLEYLGDSETLNKEWLREPEETPATGD
5232200100100143010110033023010101100330042130100212223110020001003101200320230221023024112010000011102121013001201430230101002211310020012130000000122122222010110032200000023010022302011310231100012221221112101103222101011120000001100000000100022103312001020332223010000014332130011002000202101331142233232338
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MWSEYSLEVVDAVARNGSFSAAAQELHRVPSAVSYTVRQLEEWLAVPLFERRHRDVELTAAGAWFLKEGRSVVKKMQITRQQCQQIANGWRGQLAIAVDNIVRPERTRQMIVDFYRHFDDVELLVFQEVFNGVWDALSDGRVELAIGATRAIPVGGRYAFRDMGMLSWSCVVASHHPLALMDGPFSDDTLRNWPSLVREDTSRTLPKRITWLLDNQKRVVVPDWESSATCISAGLCIGMVPTHFAKPWLNEGKWVALELENPFPDSACCLTWQQNDMSPALTWLLEYLGDSETLNKEWLREPEETPATGD
1	MUSTER	3fxrA	0.197	0.935	2.546	threading_1	MLKLQTLQALICIEEVGSLRAAAQLLHLSQPALSAAIQQLEDELKAPLLVRTKRGVSLTSFGQAFMKHARLIVTESRRAQEEIGQLRGRWEGHITFAASPAIALAALPLALASFAREFPDVTVNVRDGMYPAVSPQLRDGTLDFALTAAHKHDIDTDLEAQPLYVSDVVIVGQRQHPMANAT---RLAELQECRWAFSSAPRGPGAIARYGLPEPKLGLVCESFLALPGVVAHSDLLTTMPRTLYERNAFKDQLCSIPLQDALPNPTIYVLRRHLPVTPAAAGLIRWIQHHAL-----------------
2	SPARKS	3fxra	0.193	0.935	4.629	threading_2	MLKLQTLQALICIEEVGSLRAAAQLLHLSQPALSAAIQQLEDELKAPLLVRTKRGVSLTSFGQAFMKHARLIVTESRRAQEEIGQLRGRWEGHITFAASPAIALAALPLALASFAREFPDVTVNVRDGMYPAVSPQLRDGTLDFALTAAHKHDIDTDLEAQPLYVSDVVIVGQRQHPMANAT---RLAELQECRWAFSSAPRGPGAIIRNAFARPKLGLVCESFLALPGVVAHSDLLTTMPRTLYERNAFKDQLCSIPLQDALPNPTIYVLRRHDPVTPAAAGLIRWIQHHAL-----------------
3	PROSPECT2	1iz1a	0.192	0.923	3.652	threading_3	M-EFRQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLERSHRGIELTAAGHAFLEDARRILELAGRSGDRSRAAARGDVGELSVAYFGTPIYRSLPLLLRAFLTSTPTATVSLTHMTKDEQVEGLLAGTIHVGFSR--FFPRHPGIEIVNIAQEDLYLAVHRSQSGKF-GKTCKLADLRAVELTLFPRGGRPSFADEVIGLEPRIARVVEDATAALALTMAGAASSIVPASVAA--IRWPDIAFARIVGTRVKVPISCIFRKEKQPPILARFVEHVRRS------------------A
4	PPA-I	3fxrA	0.193	0.935	4.099	threading_4	MLKLQTLQALICIEEVGSLRAAAQLLHLSQPALSAAIQQLEDELKAPLLVRTKRGVSLTSFGQAFMKHARLIVTESRRAQEEIGQLRGRWEGHITFAASPAIALAALPLALASFAREFPDVTVNVRDGMYPAVSPQLRDGTLDFALTAAHKHDIDTDLEAQPLYVSDVVIVGQRQHPMANATRL---AELQECRWAFSSAPRGPGAIIRNAFARPKLGLVCESFLALPGVVAHSDLLTTMPRTLYERNAFKDQLCSIPLQDALPNPTIYVLRRHDLVTPAAAGLIRWIQHHAL-----------------
5	HHPRED-l	1al3_A	0.161	0.703	3.486	threading_5	--------------------------------------------------------------------------------------TWPDKGSLYVATTHTQARYALPGVIKGFIERYPRVSLHMHQGSPTQIAEAVSKGNADFAIATEAL-HLYDDLVMLPCYHWNRSIVVTPEHPLATKGS-VSIEELAQYPLVTYTFGFTGRSELDTAGLTPRIVFTATDADVIKTYVRLGLGVGVIASMAVD-PVSDPDLVKLDANGIFSHSTTKIGFRRSTLRSYMYDFIQRFAPHLT--RDVVDTAVALRSNE-
6	HHPRED-g	3fxq_A	0.190	0.932	2.922	threading_6	MLKLQTLQALICIEEVGSLRAAAQLLHLSQPALSAAIQQLEDELKAPLLVRTKRGVSLTSFGQAFMKHARLIVTESRRAQEEIGQLRGRWEGHITFAASPAIALAALPLALASFAREFPDVTVNVRDGYPAVS-PQLRDGTLDFALTAAHKHDIDTDLEAQPLYVSDVVIVGQRQHPMANATR---LAELQECRWAFSSAPRGPGAIIRNAFPEPKLGLVCESFLALPGVVAHSDLLTTMPRTLYERNAFKDQLCSIPLQDALPNPTIYVLRRHDLVTPAAAGLIRWI-------QHHAL----------
7	SP3	1iz1a	0.192	0.923	4.955	threading_7	M-EFRQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLERSHRGIELTAAGHAFLEDARRILELAGRSGDRSRAAARGDVGELSVAYFGTPIYRSLPLLLRAFLTSTPTATVSLTHMTKDEQVEGLLAGTIHVGFSRF--FPRHPGIEIVNIAQEDLYLAVHRSQSGKFGK-TCKLADLRAVELTLFPRGGRFADEVIGLFKHPRIARVVEDATAALALTMAGAASSIVPASVA--AIRWPDIAFARIVGTRVKVPISCIFRKEKQPPILARFVEHVRRSA------------------
8	SAM-T99	3fxrA	0.194	0.929	3.659	threading_8	MLKLQTLQALICIEEVGSLRAAAQLLHLSQPALSAAIQQLEDELKAPLLVRTKRGVSLTSFGQAFMKHARLIVTESRRAQEEIGQLRGRWEGHITFAASPAIALAALPLALASFAREFPDVTVNVRDGMYPAVSPQLRDGTLDFALTAAHKHDIDTDLEAQPLYVSDVVIVGQRQHPMANA---TRLAELQECRWAFSSAGAIIRNAFARYGPEPKLGLVCESFLALPGVVAHSDLLTTMPRTLYERNAFKDQLCSIPLQDLPNPTIYVLRRHDLPVTPAAAGLIRWIQHH-------------------
9	MUSTER	1iz1B	0.188	0.929	2.437	threading_9	M-EFRQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLERSHRGIELTAAGHAFLEDARRILELAGRSGDRSRAAARGDVGELSVAYFGTPIYRSLPLLLRAFLTSTPTATVSLTHMTKDEQVEGLLAGTIHVGFSRF--FPRHPGIEIVNIAQEDLYLAVHRSQSGKFGK-TCKLADLRAVELTLFPRGGRPIGLFKHAGIEPRIARVVEDATAALALTMAGAASSIVPASVAAI--RWPDIAFARIVGTRVKVPISCIFRKEKQPPILARFVEHVRRSAKD----------------
10	SPARKS	1iz1a	0.192	0.923	4.618	threading_10	-MEFRQLKYFIAVAEAGNMAAAAKRLHVSQPPITRQMQALEADLGVVLLERSHRGIELTAAGHAFLEDARRILELAGRSGDRSRAAARGDVGELSVAYFGTPIYRSLPLLLRAFLTSTPTATVSLTHMTKDEQVEGLLAGTIHVGFS--RFFPRHPGIEIVNIAQEDLYLAVHRSQSGK-FGKTCKLADLRAVELTLFPRGGRFADEVIGLFKHPRIARVVEDATAALALTMAGAASSIVPASVAA--IRWPDIAFARIVGTRVKVPISCIFRKEKQPPILARFVEHVRRSA------------------

Predicted Tertiary Structure


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TM-score=0.661 to 2esnC SCOP code=a.4.5.37	TM-score=0.663 to 2esnC SCOP code=a.4.5.37	TM-score=0.662 to 2esnC SCOP code=a.4.5.37	TM-score=0.781 to 1iz1B SCOP code=a.4.5.37	TM-score=0.657 to 1i6aA SCOP code=c.94.1.1