Template-based Modeling Results for YDHW_ECOLI


  Submitted Primary Sequence

>Length 215
MGKMNHQDELPLAKVSEVDEAKRQWLQGMRHPVDTVTEPEPAEILAEFIRQHSAAGQLVARAVFLSPPYLVAEEELSVLLESIKQNGDYADIACLTGSKDDYYYSTQAMSENYAAMSLQVVEQDICRAIAHAVRFECQTYPRPYKVAMLMQAPYYFQEAQIEAAIAAMDVAPEYADIRQVESSTAVLYLFSERFMTYGKAYGLCEWFEVEQFQNP
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MGKMNHQDELPLAKVSEVDEAKRQWLQGMRHPVDTVTEPEPAEILAEFIRQHSAAGQLVARAVFLSPPYLVAEEELSVLLESIKQNGDYADIACLTGSKDDYYYSTQAMSENYAAMSLQVVEQDICRAIAHAVRFECQTYPRPYKVAMLMQAPYYFQEAQIEAAIAAMDVAPEYADIRQVESSTAVLYLFSERFMTYGKAYGLCEWFEVEQFQNP
CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEECCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MGKMNHQDELPLAKVSEVDEAKRQWLQGMRHPVDTVTEPEPAEILAEFIRQHSAAGQLVARAVFLSPPYLVAEEELSVLLESIKQNGDYADIACLTGSKDDYYYSTQAMSENYAAMSLQVVEQDICRAIAHAVRFECQTYPRPYKVAMLMQAPYYFQEAQIEAAIAAMDVAPEYADIRQVESSTAVLYLFSERFMTYGKAYGLCEWFEVEQFQNP
54423233222104022123222300311332232223221121002001111321200011201212222233101100320333230210000103431100022000110000011122321010002001321321122130110221112032210210021034123111022021222210000221012010200011121232324
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMGKMNHQDELPLAKVSEVDEAKRQWLQGMRHPVDTVTEPEPAEILAEFIRQHSAAGQLVARAVFLSPPYLVAEEELSVLLESIKQNGDYADIACLTGSKDDYYYSTQAMSENYAAMSLQVVEQDICRAIAHAVRFECQTYPRPYKVAMLMQAPYYFQEAQIEAAIAAMDVAPEYADIRQVESSTAVLYLFSERFMTYGKAYGLCEWFEVEQFQNP
1PROSPECT23cucA0.0810.9721.007threading_1LQPLKPEDLKRWNDKFKLEFNYYGQTKLLLFGETSGNASLKDYEEKAHNVG------LEIKQEAQDKERPLTESFIRELNRTILVQDYWRPNSVLTGESYASPEETPAFTSLVDWYNLEADKGTPVELAALLHYRYIRIHPFEDGNGRIYGYPIVIHSEDKSNYLNILHQVEAGLTPSDGANATLNDILPFVNYLSSCLIRSLTLAIKAKGESIE
2PROSPECT21urhA0.0850.9351.003threading_2AEHIDDPEIMASPGQEDRNVAQEDIEALSDHTSPLPHMLPRPETFAVAMRELGVNQD--KHLIVYDEGNLFSAPRAWWMLRTFGDDLLLEEGAVELPEGEFNAAFNPEAVVKVTDVLLASHENTAQIIDARPAARFNAEVDELVPWTELVREGELKTTDELDAIFFGRG------------VSYDKPIIVSGSGVTAAVVLLALATLDVPNVKSE
3MUSTER1vp5A0.1110.9210.957threading_3NGVEMPILGYGVFQIPP-EKTEECVYEAIYRLIDTAASYMNEEGVGRAIKRAIDEGIVRREELFVTTKLWVSDVGYESTKKAFEKQLEYIDLYLIHQPFGDVHCAWKAMEEMYKDGLVRAI--GVSNFYPDRLMDLMVHHEIVPAVNQIEIHPFYQRQEEIEFMRNYNIQPEAWGPFAEGRKN----------IFQNGVLRSIAEKYG----KTV
4SPARKS3nona0.1360.8230.719threading_4LASLPDKEPGPVVASSGLVLQATTSFADCPPLGTGVGALMEDPQALAFIRQQAARARYVGAAGLLQGKRATTHWAYHELLAPLGA-IPVHERVVRDGN----LLTGGGITA-GIDFALTLAAELFDAATAQRVQLQLEYAPAPPFNA---GSPDTAPASVVQQARQRAADSLHKRRTLRAAARLAA-----------------------------
5PROSPECT21oyzA0.1070.9580.989threading_5YQKRKASKEYGLYNQCKKLND-DELFRLLDDH-----NSLKRISSARVLQLRGGQDAVRLAIEFCSDKNYIRRDIGAFILGQIKICKKCEDLNNALNDKSARCKKNPIYSPKIVEQSQITAFDKSTNVRRATAFAISVIATIPLLINLLKDPN---GDVRNWAAFAININKYDNSDIRDCFVELQDKNELKKNTVYDDIIEAAGETSAIDKLKRS
6PPA-I2hxoA0.1200.7770.616threading_6LATGPGAIYWHITGKAELGAATDAVVTAAVTAGPTGAADSPQDAVRAVALGLWDATTQLATQLSRTPWGTVAPRIFESLGRQVQAGVPEAHWFTAS-----------SALHYILGAAGQNAANDEFLDTVSTAWEGLDPDAYPFTRAVADQVRGHDDREQFLAGITLVLTG-----ITALHRP--------------------------------
7HHPRED-l1lva_A0.2010.6930.737threading_7--------------------------------------GSPEKILAQIIQEH-REGLDWQ--EAA-TRASLSLEETRKLLQS-AAAG---QVTLLRVENDLYAISTER----YQAWW---------QAVTRALEEFHSRYPLPLARELRSRYFSRLPARVYQALLEEWSREGRLQ------LAANTVALAGFPSFSETQKKLLEDKYRVSRWQP-
8HHPRED-g1lva_A0.2200.6980.787threading_8--------------------------------------GSPEKILAQIIQEH-REG-L-DWQEAAT-RASLSLEETRKLLQS-AAAG---QVTLLRVENDLYAISTER----YQAWW-----QAVTRALEEFHSR----YPLPLARELRSRYFSRLPARVYQALLEEWSREGRL------QLAANTVALAGFPSFSETQKKLLEDKYRVSRWQPP
9SP32vq2a0.1300.9630.463threading_9VSNIKTQLAMEYMRGQDYRQATASIEDALKSP----KNELAWLVRAEIYQYNDKAQESFRQALSIKPDSAEINNNYGWFLCGRLNRPAES-MAYFDKALADPTYPTPYIANLNKGICSAK-QGQFGLAEAYLKRSL-AAQPQ-FPPAFKELARTKMLAGQLGDADYYFKKYVEVLQADDLLLGWKIAKALGNAQAAYEYEAQLQANFYSEELQTV
10SAM-T992ysrA0.2000.4420.723threading_10-GYRATKLWNEVTTSFRAGMPLRKHRQHFKKYGNCFTAGEAVDWLYDLLRNNSNFGPEVTRQQTIQ------------LLRKFLKNHVIEDIKGRWGSE---------------------NVDDNNQLF--------------------------------------------------------------------------------------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.578 to 2g03A
SCOP code=a.265.1.1
TM-score=0.742 to 1urhA
SCOP code=c.46.1.2
TM-score=0.784 to 1vp5A
SCOP code=c.1.7.1
TM-score=0.784 to 1vp5A
SCOP code=c.1.7.1
TM-score=0.501 to 1g2iA
SCOP code=c.23.16.2