Template-based Modeling Results for YEAJ_ECOLI

Submitted Primary Sequence

>Length 496
MKLHHRMLRHFIAASVIVLTSSFLIFELVASDRAMSAYLRYIVQKADSSFLYDKYQNQSIAAHVMRALAAEQSEVSPEQRRAICEAFESANNTHGLNLTAHKYPGLRGTLQTASTDCDTIVEAAALLPAFDQAVEGNRHQDDYGSGLGMAEEKFHYYLDLNDRYVYFYEPVNVEYFAMNNWSFLQSGSIGIDRKDIEKVFTGRTVLSSIYQDQRTKQNVMSLLTPVYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSRS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKLHHRMLRHFIAASVIVLTSSFLIFELVASDRAMSAYLRYIVQKADSSFLYDKYQNQSIAAHVMRALAAEQSEVSPEQRRAICEAFESANNTHGLNLTAHKYPGLRGTLQTASTDCDTIVEAAALLPAFDQAVEGNRHQDDYGSGLGMAEEKFHYYLDLNDRYVYFYEPVNVEYFAMNNWSFLQSGSIGIDRKDIEKVFTGRTVLSSIYQDQRTKQNVMSLLTPVYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSRS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEEEEECCCEEEEEECCCCEEECCCCCCHHHCCCCCCCHHHHCCCCCCCEEECCEEECCCCCEEEEEEEEEEECCCCCCEEEEEECCHHHHHHHCCCCCHHHHHHHHCEEECCCCCCCEEEEECCCCCEEEEEEEEEECCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MKLHHRMLRHFIAASVIVLTSSFLIFELVASDRAMSAYLRYIVQKADSSFLYDKYQNQSIAAHVMRALAAEQSEVSPEQRRAICEAFESANNTHGLNLTAHKYPGLRGTLQTASTDCDTIVEAAALLPAFDQAVEGNRHQDDYGSGLGMAEEKFHYYLDLNDRYVYFYEPVNVEYFAMNNWSFLQSGSIGIDRKDIEKVFTGRTVLSSIYQDQRTKQNVMSLLTPVYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSRS
5521121121000000000000000000011121011003100210101101121012100110031021332422232121002003211321001021231101200011123303210300100100021031232012101001203310000000242100001203020001211201220221122321332120100011102234232100001010112231200000002221022002232220012112110232422110001223321010000011122102000000001000000100000000000002102111311210122221120110101110121022102202342210000000022032010100020001001100200341024110001011110000013022310120022013103312331200000000103333202100200030012023353344
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MKLHHRMLRHFIAASVIVLTSSFLIFELVASDRAMSAYLRYIVQKADSSFLYDKYQNQSIAAHVMRALAAEQSEVSPEQRRAICEAFESANNTHGLNLTAHKYPGLRGTLQTASTDCDTIVEAAALLPAFDQAVEGNRHQDDYGSGLGMAEEKFHYYLDLNDRYVYFYEPVNVEYFAMNNWSFLQSGSIGIDRKDIEKVFTGRTVLSSIYQDQRTKQNVMSLLTPVYVAGQLKGIVLLDINKNNLRNIFYTHDRPLLWRFLNVTLTDTDSGRDIIINQSEDNLFQYVSYVHDLPGGIRVSLSIDILYFITSSWKSVLFWILTALILLNMVRMHFRLYQNVSRENISDAMTGLYNRKILTPELEQRLQKLVQSGSSVMFIAIDMDKLKQINDTLGHQEGDLAITLLAQAIKQSIRKSDYAIRLGGDEFCIILVDSTPQIAAQLPERIEKRLQHIAPQKEIGFSSGIYAMKENDTLHDAYKASDERLYVNKQNKNSRS
1	MUSTER	2v0nA	0.196	0.863	1.615	threading_1	------------SARILVVDDIEANVRLLE--AKLTAE--YEVSTADGPTALAMAARDLPDIILL--VMMPGMD-----GFTVCRKLKDDPTTRHI------------VVLITALDGRGDRIQGLESGASD--LTKPIDDVMLFARVRSLTRFKLVIDELRQREASGR-RMGVIAGAAARLDGLGGRVLIVDAQRVAAELEHRPVIES-----DPEKAKISAGGPV-------DLVIVNAAAKNF-------DGLRFTAALRS-EERTRQLPVLAMVDPDDRG----RMVKALEIGVNDILSRPI------DPQELSARVKTQIQRKRYTDYLRNNLDHSLELAVTDQLTGLHNRRYMTGQLDSLVKRATLGGDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNVRAIDLPCRYGGEEFVVIMPDTALADALRIAERIRMHVSGSPFTVAVTISIGVSATAGGDTPEALLKRADEGVYQAKASGRNAV
2	SPARKS	3i5aa	0.191	0.611	4.244	threading_2	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------SAMVLLVDDQA--------MIGEAVRRGLAGHESIDFHFCADPHQ------AIAQAVQIKPT-VILQDLV-------MPGLDGLTLVREYRSNPLTRDIPIIVLSTKEDPLIKSAAFAADYLVKLPDNIELVARIRYHSRSYMTLLQRDEAYRALRVSQQQLLDTNLVLQRLMNSDGLTGLSNRRHFDEYLELEWRRATRDQAQLSLLMIDVDYFKAYNDNFGHLEGDEALRQVAKAIRNSCRPSDLPARYGGEEFAMVLPNTSPGGARLLAEKLRQSVAGMNIPHSLTVSIGVATVQVGQHSRQLILDADKGLYLAKNNGRNQV
3	PROSPECT2	1w25A	0.190	0.784	3.217	threading_3	IEANVRLLEAKLTPTALAMAARFTVCRKLKDDPTTRGDRIQGLESGASDFLTKPIDDVMLFARVRSLTRF------KLVIDELRQREASGRRMGVIAGAAARLDGLGGRVLIVDDN--------------------ERQAQRVAAELGVEHRPVIE--------------------------------SDPEKAKISAGGPVDLVIVNAAAKNFDGLRFTAALRSEERTRQLPVLAMV-----------DPDDRGRMVKALE------IGVNDILSRPID--------------------------------PQELSARVKTQIQRKRYTDYLRNNLDHSLELAVTDQLTGLHNRRYMTGQLDSLVKRATLGGDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNVRAIDLPCRYGGEEFVVIMPDTALADALRIAERIRMHVSGSPEMLNVTISIGVSATAGGDTPEALLKRADEGVYQAKASGRNAH
4	PPA-I	2v0nA	0.182	0.851	2.714	threading_4	IEANVRLLEAKLTAEVSTAMDGPTALAMAARDLPDIILLDVMMPGMD---------GFTVCRKLKDDPTTRHIPVALDGRGDRIQGLES-----GAS-----------DFLTKPIDDVMLFARVRSLTRFKLVIDELRQREASGRRMGVIAGA-----------------------------------------AARLDGLGGRVL--IVDDNERQAQRVAAEL------GVEHRPVIESDPEKAKISAGGPVDLVIVNAAAKNFDGLRFTAALRSEERTRQLPVLAMVDPDDRGRMVKALEIGVNDILSRDPQELSARVKTQIQRKRYTDYLRNNLDHSLELAVTDQLTGLHNRRYMTGQLDSLVKRATLGGDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNVRAIDLPCRYGGEEFVVIMPDTALADALRIAERIRMHVSGSPFTVAVTISIGVSATAGGDTPEALLKRADEGVYQAKASGRNAV
5	HHPRED-l	1w25_A	0.199	0.780	5.976	threading_5	------------SAR-----------ILVVDD---------------I-----EANVRLLEAKLTAYYEVS-TAMDGPTALAMAAR-----DLPDIILLDVMMPGMDGF---------TVCRKLKDDPALDGRGDRIQG-LESG---------ASDFLTK---------PIDDVMLFARVRSLTRFKLV---IDELRQSLGGRVLIVDDNERELGVEH-R----PVIESDPPVDLVIVNAAALRFTAALRSEER---TR----------QLPVLAMVDPDDRGRMVKALEIGVND-ILSR-PIDPQELS--------ARVKTQIQRKRYTDYLRNNLDHSLELAVTDQLTGLHNRRYMTGQLDSLVKRATLGGDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNVRAIDLPCRYGGEEFVVIMPDTALADALRIAERIRMHVSGSREMLNVTISIGVSATAEGDTPEALLKRADEGVYQAKASGRNA-
6	HHPRED-g	1w25_A	0.183	0.859	6.123	threading_6	------------------------------SA-----------------RILVVDDIEANVRLLEAKLTAYYEAMDGPTALAMAAR-----DLPDIILLDVMMPGMDGF-----TVCRKLKDDPTTRHIPVVLITALDGRGDRIQGLESGASD------------FLTKPIDDVMLFARVRSLTRFKLVIDELRQREASGRRMGVIAGAAARDGLGGRVLIVDDNERQAQRVAAELGVEIESDPEKAKI-SAGGPVDLVIVNAAAKNFDGLRFTAALRSEERTRQLPVLAMVDPDDRKALEIGVNDILSRPIDPQELSARVKTQIQRKRYTDYLRNLDHSLELAVTDQLTGLHNRRYMTGQLDSLVKRATLGGDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNVRAIDLPCRYGGEEFVVIMPDTALADALRIAERIRMHVSGSPFTLNVTISIGVSATAEGDTPEALLKRADEGVYQAKASGRNAV
7	SP3	3i5aa	0.225	0.617	4.081	threading_7	---------------------SAMV--LLVDD------------------------QAMIGEAVRRGLA----------GHESIDFHFCADPHQAIAQAVQIKPTV--ILQDLVMPGLDGLTLVREYRS-------------------------------------------------------------------------------------------------NPLTRDIPIIVLST----------KEDPLIKSAAFAAGAND---------------------YLVKLPDNIEL---VARIRYHSRSYMTLLQRDEAYRALRVSQQQLLDTNLVLQRLMNSDGLTGLSNRRHFDEYLELEWRRATRDQAQLSLLMIDVDYFKAYNDNFGHLEGDEALRQVAKAIRNSCRPSDLPARYGGEEFAMVLPNTSPGGARLLAEKLRQSVAGMNIPHSLTVSIGVATVQVGQHSRQLILDADKGLYLAKNNGRNQV
8	SAM-T99	2v0nA	0.201	0.540	4.609	threading_8	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DGLGGRVLIVDDNERQAQRSAGGPVDLVIVNAAAKNFDGLRFTAALRSEERTRQLPVLAMVDPDDRGRMVKALEIGVNDILSRPIQELSARVKTQIQRKRYTDYLRNNLDHSLELAVTDQLTGLHNRRYMTGQLDSLVKRATLGGDPVSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNVRAIDLPCRYGGEEFVVIMPDTALADALRIAERIRMHVSGSPFGLNVTISIGVSATAGEGTPEALLKRADEGVYQAKASGVGKA
9	MUSTER	3breB	0.218	0.611	1.291	threading_9	---------------------------------------------------------------------APLDGAQAMIGEAVRRSLASE---AGI------------DFHFCSD----------------------------------PQQAVAVANQIKPT-VILQDLVMPG-------------------------VDGLTLLAAYRGNPATRD------IP---------IIVLS----------TKEEPTVKSAAFAA-------GANDYLVKLPD------------AIELVARIR-----YHSRSYIALQQRDEAYRALRESQQQLLETNLVLQRLMNSDGLTGLSNRRHFDEYLEMEWRRSLREQSQLSLLMIDVDYFKSYNDTFGHVAGDEALRQVAGAIREGCRSSDLAARYGGEEFAMVLPGTSPGGARLLAEKVRRTVESLQISHDLTVSIGVSTLVPGQTFRVLIEMADQALYQAKNNGRNQV
10	SPARKS	3brea	0.189	0.609	4.178	threading_10	---------------------------------------------------------------------------------------------------------------------------------------------------------------------------AVMVLLVDDQA--------MIGEAVRRSLASEAGI--DFHFCSDPQQAVAVA----NQIKPTVILQPGVDGLTLLAAYRGNPA---TRDIPIIVLSTKEEPTVKSAAFAAGANDYLV------KLPDAIELVARIRYHSRSYIALQQRDEAYRALRESQQQLLETNLVLQRLMNSDGLTGLSNRRHFDEYLEMEWRRSLREQSQLSLLMIDVDYFKSYNDTFGHVAGDEALRQVAGAIREGCRSSDLAARYGGEEFAMVLPGTSPGGARLLAEKVRRTVESLQISHHLTVSIGVSTLVGGQTFRVLIEMADQALYQAKNNGRNQV

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.780 to 2v0nA SCOP code=c.23.1.1	TM-score=0.794 to 2v0nA SCOP code=c.23.1.1	TM-score=0.572 to 2v0nA SCOP code=c.23.1.1	TM-score=0.604 to 2v0nA SCOP code=c.23.1.1	TM-score=0.737 to 2v0nA SCOP code=c.23.1.1