Template-based Modeling Results for YEBB_ECOLI


  Submitted Primary Sequence

>Length 200
MNINYPAEYEIGDIVFTCIGAALFGQISAASNCWSNHVGIIIGHNGEDFLVAESRVPLSTITTLSRFIKRSSNQRYAIKRLDAGLTERQKQRIVEQVPSRLRKLYHTGFKYESSRQFCSKFVFDIYKEALCIPVGEIETFGELLNSNPNAKLTFWKFWFLGSIPWERKTVTPASLWHHPGLVLIHAEGVETPQPELTEAV
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNINYPAEYEIGDIVFTCIGAALFGQISAASNCWSNHVGIIIGHNGEDFLVAESRVPLSTITTLSRFIKRSSNQRYAIKRLDAGLTERQKQRIVEQVPSRLRKLYHTGFKYESSRQFCSKFVFDIYKEALCIPVGEIETFGELLNSNPNAKLTFWKFWFLGSIPWERKTVTPASLWHHPGLVLIHAEGVETPQPELTEAV
CCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCEEEEEEEECCCEEEEEECCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCHHHHHCCCCEEEEEECCCCCCCHHHHCCC
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MNINYPAEYEIGDIVFTCIGAALFGQISAASNCWSNHVGIIIGHNGEDFLVAESRVPLSTITTLSRFIKRSSNQRYAIKRLDAGLTERQKQRIVEQVPSRLRKLYHTGFKYESSRQFCSKFVFDIYKEALCIPVGEIETFGELLNSNPNAKLTFWKFWFLGSIPWERKTVTPASLWHHPGLVLIHAEGVETPQPELTEAV
55431213132000000012121101012013120100000002222100002032322221202201331333200011023212341122002101330422120113231220000200020013012131121120131212113232200121012202233420001112423101100122132222322324
12345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMNINYPAEYEIGDIVFTCIGAALFGQISAASNCWSNHVGIIIGHNGEDFLVAESRVPLSTITTLSRFIKRSSNQRYAIKRLDAGLTERQKQRIVEQVPSRLRKLYHTGFKYESSRQFCSKFVFDIYKEALCIPVGEIETFGELLNSNPNAKLTFWKFWFLGSIPWERKTVTPASLWHHPGLVLIHAEGVETPQPELTEAV
1MUSTER2if6A0.2640.9103.089threading_1------WQPQTGDIIFQISRSSQSKAIQLATHSDYSHTGMLVMRNKK-PYVFEA-VGPVKYTPLKQWIAHGEKGKYVVRRVEGGLSVEQQQKLAQTAKRYLGKPYDFSFSWSDDRQYCSEVVWKVYQNALGMRVGEQQKLKEFDLSNPLVQAKLKERY-GKNIPLEETVVSPQAVFDAPQLTTVAKEWPLF---------
2SPARKS2if6a0.2690.9104.660threading_2------WQPQTGDIIFQISRSSQSKAIQLATHSDYSHTGMLVMRNK-KPYVFEAVGP-VKYTPLKQWIAHGEKGKYVVRRVEGGLSVEQQQKLAQTAKRYLGKPYDFSFSWSDDRQYCSEVVWKVYQNALGMRVGEQQKLKEFDLSNPLVQ-AKLKERYGKNIPLEETVVSPQAVFDAPQLTTVAKEWPLF---------
3PROSPECT22if6A0.2580.9103.344threading_3WQ------PQTGDIIFQISRSSQSKAIQLATHSDYSHTGMLVMRNKKPYVFE--AVGPVKYTPLKQWIAHGEKGKYVVRRVEGGLSVEQQQKLAQTAKRYLGKPYDFSFSWSDDRQYCSEVVWKVYQNALGMRVGEQQKLKEFDLSNPLVQA-KLKERYGKNIPLEETVVSPQAVFDAPQLTTVAKEW---------PLF
4PPA-I2if6A0.2530.9105.431threading_4------WQPQTGDIIFQISRSSQSKAIQLATHSDYSHTGMLVMRNKKPYVFEA--VGPVKYTPLKQWIAHGEKGKYVVRRVEGGLSVEQQQKLAQTAKRYLGKPYDFSFSWSDDRQYCSEVVWKVYQNALGMRVGEQQKLKEFDLSNPLVQAKLKERY-GKNIPLEETVVSPQAVFDAPQLTTVAKEWPLF---------
5HHPRED-l2if6_A0.2600.9058.147threading_5------WQPQTGDIIFQISRSSQSKAIQLATHSDYSHTGMLVMRNKK-PYVFEAVG-PVKYTPLKQWIAHGEKGKYVVRRVEGGLSVEQQQKLAQTAKRYLGKPYDFSFSWSDDRQYCSEVVWKVYQNALGMRVGEQQKLKEFDLSNPLVQAKLKE-RYGKNIPLEETVVSPQAVFDAPQLTTVAKEWPF----------
6HHPRED-g2if6_A0.2600.9056.825threading_6------WQPQTGDIIFQISRSSQSKAIQLATHSDYSHTGMLVMRNKKPY-VFEAV-GPVKYTPLKQWIAHGEKGKYVVRRVEGGLSVEQQQKLAQTAKRYLGKPYDFSFSWSDDRQYCSEVVWKVYQNALGMRVGEQQKLKEFDLSNPLVQAKLK-ERYGKNIPLEETVVSPQAVFDAPQLTTVAKEWLF----------
7SP32if6a0.2750.9104.426threading_7------WQPQTGDIIFQISRSSQSKAIQLATHSDYSHTGMLVMRNK-KPYVFEAVGP-VKYTPLKQWIAHGEKGKYVVRRVEGGLSVEQQQKLAQTAKRYLGKPYDFSFSWSDDRQYCSEVVWKVYQNALGMRVGEQQKLKEFDLSNPLVQ-AKLKERYGKNIPLEETVVSPQAVFDAPQLTTVAK---EWPLF------
8SAM-T992if6A0.2740.8958.102threading_8------WQPQTGDIIFQISRSSQSKAIQLATHSDYSHTGMLVMRN-KKPYVFEAVGP-VKYTPLKQWIAHGEKGKYVVRRVEGGLSVEQQQKLAQTAKRYLGKPYDFSFSWSDDRQYCSEVVWKVYQNALGMRVGEQQKLKEFDLSNPLVQA-KLKERYGKNIPLEETVVSPQAVFDAPQLTTVAKEW------------
9MUSTER3kw0B0.2060.7751.075threading_9IKINLINVLKTGDIFLCSGNYLVSKLIKKVSES-FSHTGIIVKW-GEHTLIESVEDDGVRIVPLEHYIKNYENSSLFIARHELLQNRNLIKVGFSLLNSGYDKNEGIGRHEDNNEYICSEFVNECFKKI-GVEFL--------------TDSFIF----------------PEHIAADHHVLPIAQ--IE----------
10SPARKS3kw0a0.2110.7601.285threading_10KYENLINVLKTGDIFLCSGNYLVSKLIKKVSES-FSHTGIIVKW-GEHTLIESVEDDGVRIVPLEHYIKNYENSNLFIARLQNVNDDSEIRNLIKVGFSLLNSGYDIGRHEDNNEYICSEFVNECFKK-IGVEF---------------------------------LFIFPEHIAADHHVLPIAQIE------------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.952 to 2if6A
SCOP code=d.3.1.21
TM-score=0.951 to 2if6A
SCOP code=d.3.1.21
TM-score=0.951 to 2if6A
SCOP code=d.3.1.21
TM-score=0.947 to 2if6A
SCOP code=d.3.1.21
TM-score=0.949 to 2if6A
SCOP code=d.3.1.21