Template-based Modeling Results for YEBC_ECOLI


  Submitted Primary Sequence

>Length 246
MAGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGGDPDANPRLRAAVDKALSNNMTRDTLNRAIARGVGGDDDANMETIIYEGYGPGGTAIMIECLSDNRNRTVAEVRHAFSKCGGNLGTDGSVAYLFSKKGVISFEKGDEDTIMEAALEAGAEDVVTYDDGAIDVYTAWEEMGKVRDALEAAGLKADSAEVSMIPSTKADMDAETAPKLMRLIDMLEDCDDVQEVYHNGEISDEVAATL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGGDPDANPRLRAAVDKALSNNMTRDTLNRAIARGVGGDDDANMETIIYEGYGPGGTAIMIECLSDNRNRTVAEVRHAFSKCGGNLGTDGSVAYLFSKKGVISFEKGDEDTIMEAALEAGAEDVVTYDDGAIDVYTAWEEMGKVRDALEAAGLKADSAEVSMIPSTKADMDAETAPKLMRLIDMLEDCDDVQEVYHNGEISDEVAATL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCEEEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEECCCCHHHHHHHHHHCCCCEEEECCCCCEEEEECHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCHHHEEECCCCCHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MAGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGGDPDANPRLRAAVDKALSNNMTRDTLNRAIARGVGGDDDANMETIIYEGYGPGGTAIMIECLSDNRNRTVAEVRHAFSKCGGNLGTDGSVAYLFSKKGVISFEKGDEDTIMEAALEAGAEDVVTYDDGAIDVYTAWEEMGKVRDALEAAGLKADSAEVSMIPSTKADMDAETAPKLMRLIDMLEDCDDVQEVYHNGEISDEVAATL
554202111011221031232021012002100100431211142002011001101433113300120023022234322011000201011100000100021322001100200230203112310000001110001034221310020003021211222432101000113101201200331212011010100222413022310220130031034033021000103122300322
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMAGHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLGGGDPDANPRLRAAVDKALSNNMTRDTLNRAIARGVGGDDDANMETIIYEGYGPGGTAIMIECLSDNRNRTVAEVRHAFSKCGGNLGTDGSVAYLFSKKGVISFEKGDEDTIMEAALEAGAEDVVTYDDGAIDVYTAWEEMGKVRDALEAAGLKADSAEVSMIPSTKADMDAETAPKLMRLIDMLEDCDDVQEVYHNGEISDEVAATL
1MUSTER1konA0.9960.9473.707threading_1--GHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLD-----ANPRLRAAVDKALSNNMTRDTLNRAIARG------ANMETIIYEGYGPGGTAIMIECLSDNRNRTVAEVRHAFSKCGGNLGTDGSVAYLFSKKGVISFEKGDEDTIMEAALEAGAEDVVTYDDGAIDVYTAWEEMGKVRDALEAAGLKADSAEVSMIPSTKADMDAETAPKLMRLIDMLEDCDDVQEVYHNGEISDEVAATL
2SPARKS1lfpa0.4370.9676.937threading_2----SHWAQIKHKKAKVDAQRGKLFSKLIREIIVATRLGGPNPEFNPRLRTAIEQAKKAN-PWENIERAIKKGAGELEGEQFEEVIYEGYAPGGV-AVVLATTDNRNRTTSEVRHVFTKHGGNLGASGCVSYLFERKGYIEVPAKSEEELLEKAIEVGAEDVQPGEE-VHIIYTVPEELYEVKENLEKLGVPIEKAQITWKPISTVQIDEETAQKVIKLLNALEELDDVQQVIANFEIPEEILQK-
3PROSPECT21konA0.9870.9474.167threading_3--GHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLDA-----NPRLRAAVDKALSNNMTRDTLNRAIAR------GANMETIIYEGYGPGGTAIMIECLSDNRNRTVAEVRHAFSKCGGNLGTDGSVAYLFSKKGVISFEKGDEDTIMEAALEAGAEDVVTYDDGAIDVYTAWEEMGKVRDALEAAGLKADSAEVSMIPSTKADMDAETAPKLMRLIDMLEDCDDVQEVYHNGEISDEVAATL
4PPA-I1konA0.9870.9475.468threading_4--GHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKLD-----ANPRLRAAVDKALSNNMTRDTLNRAIARGAN------METIIYEGYGPGGTAIMIECLSDNRNRTVAEVRHAFSKCGGNLGTDGSVAYLFSKKGVISFEKGDEDTIMEAALEAGAEDVVTYDDGAIDVYTAWEEMGKVRDALEAAGLKADSAEVSMIPSTKADMDAETAPKLMRLIDMLEDCDDVQEVYHNGEISDEVAATL
5HHPRED-l1kon_A1.0000.9438.523threading_5--GHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKL-----DANPRLRAAVDKALSNNMTRDTLNRAIARG------ANMETIIYEGYGPGGTAIMIECLSDNRNRTVAEVRHAFSKCGGNLGTDGSVAYLFSKKGVISFEKGDEDTIMEAALEAGAEDVVTYDDGAIDVYTAWEEMGKVRDALEAAGLKADSAEVSMIPSTKADMDAETAPKLMRLIDMLEDCDDVQEVYHNGEISDEVAAT-
6HHPRED-g1kon_A1.0000.9477.194threading_6--GHSKWANTRHRKAAQDAKRGKIFTKIIRELVTAAKL-----DANPRLRAAVDKALSNNMTRDTLNRAIARG------ANMETIIYEGYGPGGTAIMIECLSDNRNRTVAEVRHAFSKCGGNLGTDGSVAYLFSKKGVISFEKGDEDTIMEAALEAGAEDVVTYDDGAIDVYTAWEEMGKVRDALEAAGLKADSAEVSMIPSTKADMDAETAPKLMRLIDMLEDCDDVQEVYHNGEISDEVAATL
7SP31lfpa0.4330.9677.111threading_7----SHWAQIKHKKAKVDAQRGKLFSKLIREIIVATRLGGPNPEFNPRLRTAIEQAKK-ANPWENIERAIKKGAGELEGEQFEEVIYEGYAPGGV-AVVLATTDNRNRTTSEVRHVFTKHGGNLGASGCVSYLFERKGYIEVPAVSEEELLEKAIEVGAEDVQPGEEV-HIIYTVPEELYEVKENLEKLGVPIEKAQITWKPISTVQIDEETAQKVIKLLNALEELDDVQQVIANFEIPEEILQK-
8SAM-T991lfpA0.4410.9676.714threading_8----SHWAQIKHKKAKVDAQRGKLFSKLIREIIVATRLGGPNPEFNPRLRTAIEQAKKAN-PWENIERAIKKGAGELEGEQFEEVIYEGYAPGGVAV-VLATTDNRNRTTSEVRHVFTKHGGNLGASGCVSYLFERKGYIEVPAVSEEELLEKAIEVGAEDVQPGEEV-HIIYTVPEELYEVKENLEKLGVPIEKAQITWKPISTVQIDEETAQKVIKLLNALEELDDVQQVIANFEIPEEILQK-
9MUSTER1lfpA0.4410.9673.612threading_9----SHWAQIKHKKAKVDAQRGKLFSKLIREIIVATRLGGPNPEFNPRLRTAIEQAKKAN-PWENIERAIKKGAGELEGEQFEEVIYEGYAPGGVAVVLAT-TDNRNRTTSEVRHVFTKHGGNLGASGCVSYLFERKGYIEVPAKSEEELLEKAIEVGAEDVQPGEE-VHIIYTVPEELYEVKENLEKLGVPIEKAQITWKPISTVQIDEETAQKVIKLLNALEELDDVQQVIANFEIPEEILQK-
10SPARKS1mw7a0.3070.8626.477threading_10----------------------KVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKRASS--KEGNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKQGASIVPNGSLEFMFNRKSVFECLKNSLEDLEFALIDYGLEELEEVEDK-IIIRGDYNSFKLLNEGFESLKLPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNIE---------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.970 to 1konA
TM-score=0.997 to native
SCOP code=e.39.1.1
TM-score=0.968 to 1konA
TM-score=0.995 to native
SCOP code=e.39.1.1
TM-score=0.973 to 1lfpA
TM-score=0.790 to native
SCOP code=e.39.1.1
TM-score=0.967 to 1konA
TM-score=0.993 to native
SCOP code=e.39.1.1
TM-score=0.968 to 1konA
TM-score=0.994 to native
SCOP code=e.39.1.1

  Experimental Structure

Download 1konA
SCOP code=e.39.1.1