Template-based Modeling Results for YEBS_ECOLI


  Submitted Primary Sequence

>Length 427
MALNTPQITPTKKITVRAIGEELPRGDYQRCPQCDMLFSLPEINSHQSAYCPRCQAKIRDGRDWSLTRLAAMAFTMLLLMPFAWGEPLLHIWLLGIRIDANVMQGIWQMTKQGDAITGSMVFFCVIGAPLILVTSIAYLWFGNRLGMNLRPVLLMLERLKEWVMLDIYLVGIGVASIKVQDYAHIQAGVGLFSFVALVILTTVTLSHLNVEELWERFYPQRPATRRDEKLRVCLGCHFTGYPDQRGRCPRCHIPLRLRRRHSLQKCWAALLASIVLLLPANLLPISIIYLNGGRQEDTILSGIMSLASSNIAVAGIVFIASILVPFTKVIVMFTLLLSIHFKCQQGLRTRILLLRMVTWIGRWSMLDLFVISLTMSLINRDQILAFTMGPAAFYFGAAVILTILAVEWLDSRLLWDAHESGNARFDD
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MALNTPQITPTKKITVRAIGEELPRGDYQRCPQCDMLFSLPEINSHQSAYCPRCQAKIRDGRDWSLTRLAAMAFTMLLLMPFAWGEPLLHIWLLGIRIDANVMQGIWQMTKQGDAITGSMVFFCVIGAPLILVTSIAYLWFGNRLGMNLRPVLLMLERLKEWVMLDIYLVGIGVASIKVQDYAHIQAGVGLFSFVALVILTTVTLSHLNVEELWERFYPQRPATRRDEKLRVCLGCHFTGYPDQRGRCPRCHIPLRLRRRHSLQKCWAALLASIVLLLPANLLPISIIYLNGGRQEDTILSGIMSLASSNIAVAGIVFIASILVPFTKVIVMFTLLLSIHFKCQQGLRTRILLLRMVTWIGRWSMLDLFVISLTMSLINRDQILAFTMGPAAFYFGAAVILTILAVEWLDSRLLWDAHESGNARFDD
CCCCCCCCCCCCCCCCCCCCCCCCHHHEEECCCCCCEEECCCCCCCCEEECCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHCHHHHHEECCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCEEEEECHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHEEECCCCCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MALNTPQITPTKKITVRAIGEELPRGDYQRCPQCDMLFSLPEINSHQSAYCPRCQAKIRDGRDWSLTRLAAMAFTMLLLMPFAWGEPLLHIWLLGIRIDANVMQGIWQMTKQGDAITGSMVFFCVIGAPLILVTSIAYLWFGNRLGMNLRPVLLMLERLKEWVMLDIYLVGIGVASIKVQDYAHIQAGVGLFSFVALVILTTVTLSHLNVEELWERFYPQRPATRRDEKLRVCLGCHFTGYPDQRGRCPRCHIPLRLRRRHSLQKCWAALLASIVLLLPANLLPISIIYLNGGRQEDTILSGIMSLASSNIAVAGIVFIASILVPFTKVIVMFTLLLSIHFKCQQGLRTRILLLRMVTWIGRWSMLDLFVISLTMSLINRDQILAFTMGPAAFYFGAAVILTILAVEWLDSRLLWDAHESGNARFDD
5533233222233121311233122200010120100021231332220101103020121332112100000000000000010010110101112010100200110032221100000000000000000000000000231222020000002302310000000000000001023002010000000000000000001120013100220133312233333021010011012333413012021213234320120000000000000001100110002111123321011000000223110000000000000001000000000002131331231100001001100200000000000000002233001010010000000000000001210001000202342324344
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMALNTPQITPTKKITVRAIGEELPRGDYQRCPQCDMLFSLPEINSHQSAYCPRCQAKIRDGRDWSLTRLAAMAFTMLLLMPFAWGEPLLHIWLLGIRIDANVMQGIWQMTKQGDAITGSMVFFCVIGAPLILVTSIAYLWFGNRLGMNLRPVLLMLERLKEWVMLDIYLVGIGVASIKVQDYAHIQAGVGLFSFVALVILTTVTLSHLNVEELWERFYPQRPATRRDEKLRVCLGCHFTGYPDQRGRCPRCHIPLRLRRRHSLQKCWAALLASIVLLLPANLLPISIIYLNGGRQEDTILSGIMSLASSNIAVAGIVFIASILVPFTKVIVMFTLLLSIHFKCQQGLRTRILLLRMVTWIGRWSMLDLFVISLTMSLINRDQILAFTMGPAAFYFGAAVILTILAVEWLDSRLLWDAHESGNARFDD
1MUSTER3gjxA0.1060.9270.955threading_1WPKHWPTFISDI-VGASRTSESLCQNNMVILKLSEEVFDFSSGQITQ-VKAKHLKDSMCNEFSQIFFVMENSQNAPLVHATLETLLRFLNWIPLGYIFETKLISTLIYKFLNVMFRNVSLKCLTEIAEQFETLFTLTMMQLKQMLPLNTNIRLAYSNGKDDEQNFIQNLSLFLCTFLKEHGQL-LEKRLNLREALMEALHYMLLVSEVECLEYWNHLAAELYRESPFSTSAS-----PLLSGSQHFDIP------------PRRQLYLTVLSKVRLLMVSRMKPLVVENDQGEVMKDTDSINLYKNMRE-----TLVYLTHLDYVDTEIIMTKKLQNQVN-GTEWSWKNLNTLCWAIGSISG-EDEKRFLVTVIKDLLG---LCEQKRGKDNKAIIASNIMYIVGQYP-HWKFLKTVVNKEFMHETH
2SPARKS2xwub0.0840.9251.141threading_2LEVPLQDCEALIQAAFAALQDSELFDSSVEA--IVNAISQPDAQRYVNTLVLGLQEQLRQAVQNGDMETSHGICRIAVALGENHSRALLD-QVEHWQSFLALVNMIMFCTGNETTSSLTLTFWYTLQDDILSFEAEKQAVYQQVYRPVYFQLVDVLLHAQFKEQFRIYRVDISDTLMYVYEML----GAELLSNLYDKLGRLLWQHTEALLYGFQSIAETIDVNYSDVVPGLIGLIPRISISNVQ-----------------LADTVMFTIGALSEWLPVMINSVLPLVLHALGNPELSVSSVSTLKK------ICRECKYDLPPY--AANIVAVSQDVLMKQIHKTSQCMWLMQALGFLLSAKNLHSLISPYIQQLEKLAEEIPNPSNKLAIVHILGLLSNLFTTLDISLQQVFQLIQKVLSKWLN
3PROSPECT21xm9A0.0820.8311.724threading_3-------------------GLTIPKVQYLSSQDEKYIQHTCFQDESAKQQVYQLGGKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKLETRRQNG-----IREAVSLLRRTGNAEIQKQLLIADALPVLADRVIIPFSGWCVVDPEVFFNATGCLRNLADAGRQTMLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNALPEE---------------------------------ETNPKGSGWLYHSDAIRTYLNLMGK-----------SKKDATLEACAGALQNTASKGLMSSGMSQLIGLKEKGLPQIARL----LQSGNSDVVRSGASLLSNMSRHPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMASQPQLLLSDMWSSKELQGVL
4PPA-I3g61A40.0800.6461.258threading_4-----------------------------------------------------------------------------------------------------------------------LTLVILAISPVLGLSAGIWAKILSSFTDKELHAYAKAGAVAELERYNNNLEEAKRLGIKKAITA-------NISMGAAFLLIYASYALAFWYGTSLVISKEYSLDEDVPPASFWRI----------------LKLNSTEWPYFVVGIFCAIINGGLQPAFSVIFSKVVGVFTNGGPPETQRQNSNLFSLLFLILGIISFITFFLQGFTFGKAGEILTKRLRYPKNTTGALTTRLANDAAQVK--GATGSRLAVIFQNIANLG-------TGIIISLIYFENVLLVFSAIVFGAMAVGQVSSFAPDYAK
5HHPRED-l2f9y_B0.1230.4961.158threading_5--------------------------VWTKCDSCGQVLYRAELERNLE-VCPKCDHHMR---MTARNRLH--------SLLDEGSL--VELGSLKFRMKGTLYGMPVVAAAFEFAFMGGSMGSVV----GARFVRAVEQALEDNCPEALMSLM---------QMAKTSAALAKMQERGISVLTDPTMGGVSASFAMLGDLNIAEPIGAGPRVIEQTVR-EKLPP--GFQ-----------RSEFLIEKGAIDMIV-RRP--EMRLKLAS-ILAKLMNLPAPNP------------------------------------------------------------------------------------------------------------------------------------------------
6HHPRED-g2k4x_A0.2040.1260.937threading_6MQ----------KRELYEIADGKLVRKHRFCPRCGPVFLA---EHADRYSCGRCGYTEFKKAKKSKS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7SP33s7ba0.1010.9250.481threading_7RA--LQPFQVDLLFSCPAYAYVLTVNERNHCEYC--FTRKEGLSK-----CGRCKQAFYCNVECQKEDWPMHKLECSPMVVFGENWPSETVRLT-------ARILAKQKIHPERTPSEKLLAVKEFESHLDKLDNEKKDLIQSDIAALHHFYSKHLEFPDNDSLVVLFAQVNCNG-FTIEDEELSHLGSAIFPDVALMNHSCCVIVTYKGTLAEQEIKPGEEVFTSYIDLLYPTEDRLRDSYFFTCECQECTTKDKDKAKVEIRKPKAEAIRDMVRYARNVIEEFRRAKHYKSPSE--LLEICELSQEKMSSV-----FEDSNVYMLHMMYQAMGVCLYMQDWEGALQYGQKIIKPYSKHPLYS-LNVASMWLKLGRLYM-GLEHKAAGEKALKKAIAIMEVAH---GKDHPYISEIKQEIESH---
8SAM-T991ivsA30.1710.3281.000threading_8----SRAVRYAFSRYYHEGLAYRAPRLVNWCPRCETTLSDLEVE----ATCSRCGTP---------------------------------------------------------IEYAIFPQWWLRMRPLAEEVLKGLRRGDIFVPRWKKVNMDWLENVKDWN--------------------------------------------ISRQLWWGHQIPA----------WYCEDCQAVNVPEDPTSCEACGSPRLKRD------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9MUSTER1u6gC0.1190.9650.868threading_9IGEYLEKIIPLV---VKFCNVDDDELREYCIQAFESFVRRKEVYPHVSTIINICLKYLTYDMSWKVRRAAAKCLDAVVS-MLPEFYPALISRFKEREENADVFHAYLSLLKQQSQVPNIVKALHKQMVKTRQCCFNMLTELVNVLPGAIPVLVPGIIFSLN-SNLKIDALSCLYVILCNHSPQVFHPHVQALVPPVVACVG-FYKITSEALLVTQQLVKVIRPLDQPSSFDATPYIKDLFTC--------TIKRLKAAIDQEVKERAISCMGQIICNLGDNLLQIFLERLKNEITRLTTVKALTLIAGSPLKIDGVPILASFL-RALKLGTLSALDILIKNSDSLTAAMIDAVLDLPPLISEMHVSQMAISFLTTLAKVYPSSLLLQGGALSAMLDFFQALVVTGTNNLGYMDLLRMLTGPVYSQTH
10SPARKS1a4ya0.1180.8500.936threading_10VRLDDCGLTEARCKDISSALRVNPALAELNLRSNELVHCVLQGLQT-----PSCKQKLSLQN-CCLTGAGCGVLSSTLRTLPT----LQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYC----SLSAASCEPLASVLRAKPDFKEL-----TVSNNDINEAGVRVLCQGLKDSPKLESCGVTSDNCRDLCGIVASKASLRELAGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDRAKESLKE-LSLAG-NELGDEGARLLCETLL-------------EPGCQLES------LWVKSCSFTAACCSHFSSVLARFLLELQI--------SNNRLEDAGVRELCQGLGWLADCDVSDSSCSSLAATLLANHSLRELD----------------LSNNCLGILQLVESVRQPGCLLEQ

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.564 to 3ea5B
SCOP code=a.118.1.1
TM-score=0.818 to 1b3uA
SCOP code=a.118.1.2
TM-score=0.617 to 1m8xA
SCOP code=a.118.1.8
TM-score=0.742 to 1xm9A
SCOP code=a.118.1.24
TM-score=0.400 to 1ysmA
SCOP code=a.2.16.1