Template-based Modeling Results for YEDN_ECOLI


  Submitted Primary Sequence

>Length 173
MDIALVRLFKCVELHNSKLDLTDLHLGSLPPLPSWIEVLYLRHNGLATIQIPKFCKELELDFNNYMVFPKVSDGITQVSVDNNLISRVDSSPSKAMTISIYRNKIWXIPAMPETTKLFNCGDNKIKEIQYFPNHLEKARMECDIEVVSAIYSNKELLFKECNSFEETFLYHGL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MDIALVRLFKCVELHNSKLDLTDLHLGSLPPLPSWIEVLYLRHNGLATIQIPKFCKELELDFNNYMVFPKVSDGITQVSVDNNLISRVDSSPSKAMTISIYRNKIWXIPAMPETTKLFNCGDNKIKEIQYFPNHLEKARMECDIEVVSAIYSNKELLFKECNSFEETFLYHGL
CCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHEEECCCCHHHCCCCCCCHHHEECCCCCHHHHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MDIALVRLFKCVELHNSKLDLTDLHLGSLPPLPSWIEVLYLRHNGLATIQIPKFCKELELDFNNYMVFPKVSDGITQVSVDNNLISRVDSSPSKAMTISIYRNKIWXIPAMPETTKLFNCGDNKIKEIQYFPNHLEKARMECDIEVVSAIYSNKELLFKECNSFEETFLYHGL
43210220230033322201013120120231132021010221102213123102101012121220241131011000231102403211230110002313021022113202101003130330220033002020211131012012113000131120221102323
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMDIALVRLFKCVELHNSKLDLTDLHLGSLPPLPSWIEVLYLRHNGLATIQIPKFCKELELDFNNYMVFPKVSDGITQVSVDNNLISRVDSSPSKAMTISIYRNKIWXIPAMPETTKLFNCGDNKIKEIQYFPNHLEKARMECDIEVVSAIYSNKELLFKECNSFEETFLYHGL
1SPARKS3g06a0.1780.9773.080threading_1FSNPLTHLPA-LPSGLCKLWIFGNQLTSLPVLPPGLQELSVSDNQLASLPLPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLASLPTLPSELYKLWAYNNRLTLPALPSGLKELIVSGNRLTSLPVLPSELKELMVSGNLTSLPMLPSGLLSLSVYRNQLTR--LPESL-
2PROSPECT23cvrA10.2220.9882.938threading_2RNEAVSLLKECLINQFSELQLNRLNLSSLPDLPPQITVLEITQNALISLELPASLEYLDACDNRLSTLPELPASLKHLDVDNNQLT-LPELPALLEYINADNNQLTLPEL-PTSLEVLSVRNNQLTFLPELPESLEALDVSTNLESLPAVPTPTCTIILEDNPLSSRIRQPDP
3PPA-I3g06A30.1950.7114.050threading_3--------------------IFSNPLTHLPALPSGLCKLWIFGNQLTSLPLPPGLQELSVSDNQLASLPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLALPTLPSELYKLWAYNNRLTSLPALPSGLKELIVSGNR------------------------------
4HHPRED-l3cvr_A0.2320.9482.203threading_4RNEAVSLLKECLINQFSELQLNRLNLSSLPDLPPQITVLEITQNALISLPLPASLEYLDACDNRLSTLPELPASLKHLDVDNNQLT-LPELPALLEYINADNNQLT-LPELPTSLEVLSVRNNQLTFLPELPESLEALDVSTNLESLPAVP---IFFRCRENRITHIIR----
5HHPRED-g3g06_A0.2251.0001.561threading_5GESGLTTLPDCLPAHITTLVIPDNNLTSLPALPPELRTLEVSGNQLTSLPVPPGLLELSIFSNPLTHLPALPSGLCKLWIFGNQLTSLPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLASLPTLPSELYKLWAYNRLTSLPALPSGLKELIVSGNRLTSLPLPESL
6SP33g06a0.1740.9942.906threading_6LNSGLTTLPDCLPAHITTLVIPDNNLTSLPALPPELRTLEVSGNQLTSLPLPPGLLELSIFSNPLTHLPALPSGLCKLWIFGNQLTSLPVLPPGLQELSVSDNQLALPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNLASLPTLPSELYKLWAYNNRLTSLALPSGL-
7SAM-T993g06A0.1940.9832.240threading_7RAAVVQKMRACLNNGNAVLNVGESGLTTLPDLPAHITTLVIPDNNLTSLPLPPELRTLEVSGNQLTSLPVLPPGLLELSIFSNPLTHLPALPSGLCKLWIFGNQLTSLPVLPPGLQELSVSDNQLASLPALPSELCKLWAYNNQLTSLPM-LPSGLQELSVSDNQLASLPT--
8SPARKS1jl5a0.1980.9942.988threading_8REMAVSRLRDCLDRQAHELELNNLGLSSLPELPPHLESLVASCNSLTELPLPQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEKLPENSSFLKIIDVDNNSLKLPDLPPSLEFIAAGNNQLEELPELLPFLTAIYADNNLKKLPDLPLSLESIVAGNNILEELPELQNL-
9PROSPECT21jl5a0.2201.0002.722threading_9REMAVSRLRDCLDRQAHELELNNLGLSSLPELPPHLESLVASCNSLTELPELPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELLPFLTTIYADNNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENFSGLSELPPNLYYLNASSNEIRSLCLPALP
10PPA-I3bz5A30.1160.9943.330threading_10LNKKITKLDVTPQTQLTTLDCSFNKITELDSQNKLLNRLNCDTNNITKLDLNIQLTFLDCSSNKLTEIDTPLTQLTYFDCSVNPLTELDSTLSKLTTLHCIQTDLLIDTHNTQLIYFQAEGRKIKELDTHNTQLYLLDCQAAITELDSQNPKLVYLYLNNTELTELDVSHNT-

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.746 to 1g9uA
SCOP code=c.10.2.6
TM-score=0.746 to 1g9uA
SCOP code=c.10.2.6
TM-score=0.736 to 1g9uA
SCOP code=c.10.2.6
TM-score=0.742 to 1g9uA
SCOP code=c.10.2.6
TM-score=0.746 to 1g9uA
SCOP code=c.10.2.6