Template-based Modeling Results for YEDV_ECOLI


  Submitted Primary Sequence

>Length 452
MKRLSITVRLTLLFILLLSVAGAGIVWTLYNGLASELKWRDDTTLINRTAQIKQLLIDGVNPDTLPVYFNRMMDVSQDILIIHGDSINKIVNRTNVSDGMLNNIPASETISAAGIYRSIINDTEIDALRINIDEVSPSLTVTVAKLASARHNMLEQYKINSIIICIVAIVLCSVLSPLLIRTGLREIKKLSGVTEALNYNDSREPVEVSALPRELKPLGQALNKMHHALVKDFERLSQFADDLAHELRTPINALLGQNQVTLSQTRSIAEYQKTIAGNIEELENISRLTENILFLARADKNNVLVKLDSLSLNKEVENLLDYLEYLSDEKEICFKVECNQQIFADKILLQRMLSNLIVNAIRYSPEKSRIHITSFLDTNSYLNIDIASPGTKINEPEKLFRRFWRGDNSRHSVGQGLGLSLVKAIAELHGGSATYHYLNKHNVFRITLPQRN
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKRLSITVRLTLLFILLLSVAGAGIVWTLYNGLASELKWRDDTTLINRTAQIKQLLIDGVNPDTLPVYFNRMMDVSQDILIIHGDSINKIVNRTNVSDGMLNNIPASETISAAGIYRSIINDTEIDALRINIDEVSPSLTVTVAKLASARHNMLEQYKINSIIICIVAIVLCSVLSPLLIRTGLREIKKLSGVTEALNYNDSREPVEVSALPRELKPLGQALNKMHHALVKDFERLSQFADDLAHELRTPINALLGQNQVTLSQTRSIAEYQKTIAGNIEELENISRLTENILFLARADKNNVLVKLDSLSLNKEVENLLDYLEYLSDEKEICFKVECNQQIFADKILLQRMLSNLIVNAIRYSPEKSRIHITSFLDTNSYLNIDIASPGTKINEPEKLFRRFWRGDNSRHSVGQGLGLSLVKAIAELHGGSATYHYLNKHNVFRITLPQRN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEEEEEEEECCCCCEEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHCCEEEEECCCCEEEECHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCEEEEEEEECCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MKRLSITVRLTLLFILLLSVAGAGIVWTLYNGLASELKWRDDTTLINRTAQIKQLLIDGVNPDTLPVYFNRMMDVSQDILIIHGDSINKIVNRTNVSDGMLNNIPASETISAAGIYRSIINDTEIDALRINIDEVSPSLTVTVAKLASARHNMLEQYKINSIIICIVAIVLCSVLSPLLIRTGLREIKKLSGVTEALNYNDSREPVEVSALPRELKPLGQALNKMHHALVKDFERLSQFADDLAHELRTPINALLGQNQVTLSQTRSIAEYQKTIAGNIEELENISRLTENILFLARADKNNVLVKLDSLSLNKEVENLLDYLEYLSDEKEICFKVECNQQIFADKILLQRMLSNLIVNAIRYSPEKSRIHITSFLDTNSYLNIDIASPGTKINEPEKLFRRFWRGDNSRHSVGQGLGLSLVKAIAELHGGSATYHYLNKHNVFRITLPQRN
55420121110000000000000000000010002202220122022102102210231222310210023113223100001122211000223122121331222322222211101123220000101124232200000021022112002201310111000000000010010021012102300100230243303320322212410230020014002102411211120021002202000100100010012323222302300210131021003002200100302333122322201022002200210221034230202021312010022000100000010004102440201010123330001000122202231032002201202312222021000000100031130202021234101020201347
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMKRLSITVRLTLLFILLLSVAGAGIVWTLYNGLASELKWRDDTTLINRTAQIKQLLIDGVNPDTLPVYFNRMMDVSQDILIIHGDSINKIVNRTNVSDGMLNNIPASETISAAGIYRSIINDTEIDALRINIDEVSPSLTVTVAKLASARHNMLEQYKINSIIICIVAIVLCSVLSPLLIRTGLREIKKLSGVTEALNYNDSREPVEVSALPRELKPLGQALNKMHHALVKDFERLSQFADDLAHELRTPINALLGQNQVTLSQTRSIAEYQKTIAGNIEELENISRLTENILFLARADKNNVLVKLDSLSLNKEVENLLDYLEYLSDEKEICFKVECNQQIFADKILLQRMLSNLIVNAIRYSPEKSRIHITSFLDTNSYLNIDIASPGTKINEPEKLFRRFWRGDNSRHSVGQGLGLSLVKAIAELHGGSATYHYLNKHNVFRITLPQRN
1MUSTER3dgeA0.1970.4931.552threading_1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KRIDRMKTEFIANISHELRTPLTAIKAYAETIYNSLLDLSTLKEFLEVIIDQSNHLENLLNELLDFSRLERKSLQINREKVDLCDLVESAVNAIKEFASSHNVNVLFECPVEAYIDPTRIRQVLLNLLNNGVKYSKKDAYVKVILDEKDGVLIIVEDNGIGIPDHAKDRIFEQFYRVDSTYEVPGTGLGLAITKEIVELHGGRIWVESEGKGSRFFVWIPKDR
2SAM-T993a0rA0.1920.6924.054threading_2--------------------------------------------------------------------------------IITLSKDGRITEWN--------------KKAEQLFGLKKENVLGRRLKDLPDFEEIGSVAESVFENKEPVFLNFYKFGERYFNIRFSPFRNAKTQLLEGVIITIDDVTELYKYEEERKRR----RLSILG---------------------------EMTARVAHEIRNPITIIGGFIMRMKKHLDDPETLKKYINIITNELSRLETIVKEILEYSK----ERVLEFTEFNLNELIREVYVLFEEKIRKMNIDFCFETDLRVEADRTRIKQVLINLVQNAIEATGENGKIKITSEDYTKVRVSVWNSGPPIPEELKEKIFSPFFTT----------LGLSICRKIIEEHGGKIWTENRENGVVFIFEIPKTP
3SPARKS3d36a0.2060.4734.174threading_3---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GPHMVIRLAASISHEIRNPLTAARGFIQLIEEQPLAADKRRQYARIAIEELDRAEAIITDYLTFAKPA----PETPEKLNVKLEIERVIDILRPLANMSCVDIQATAPFSVIGEREKFRQCLLNVMKNAIEAMPNGGTLQVYVSIDNGVLIRIADTGVGMTKEQLERLGEPYFT---TKGVKGTGLGMMVVYRIIESMNGTIRIESIHKGTTVSIYLPLAS
4PROSPECT21y8nA0.1420.6682.521threading_4P------------------------------------------------KQIERYSRFSPSPLSIKQFLDFGRDNAC-----------------------------------------------------------------------------EKTSYMFLRKELPVRLANTMREVNLLPDNLLNRPSVGLVQS------------------WYMQSFLELLEYENKSPEDPQVLDNFLQVLIKVRNRHNDVVPTMAQGVIFDPFISTNIQYFLDRFYTNRISFRMLINQHTLLFGGDTNPVHPKHPTCNVADVVKDAYETAKMLCEQYELEVEEDKPIQVVYVPSHLFHMLFELFKNSMRAKEGYPAVKTLVTLGKEDSIKISDLGGGVPLRKIDRLFNYMYS-------PLFGYGLPISRLYARYFQGDLKLYSEGVGTDAVIYLKALK
5PPA-I3dgeA0.2020.4933.025threading_5-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KRIDRMKTEFIANISHELRTPLTAIKAYAETIYNGELDLSTLKEFLEVIIDQSNHLENLLNELLDFSRLERKSLQINREKVDLCDLVESAVNAIKEFASSHNVNVLFECPVEAYIDPTRIRQVLLNLLNNGVKYSKKDAYVKVILDEKDGVLIIVEDNGIGIPDHAKDRIFEQFYRVDSSLTYPGTGLGLAITKEIVELHGGRIWVESEGKGSRFFVWIPKDR
6HHPRED-l2c2a_A0.1930.5044.821threading_6----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MEN--VTESKELERLKRIDRMKTEFIANISHELRTPLTAIKAYAETIYNSELDLSTLKEFLEVIIDQSNHLENLLNELLDFSRLERKSLQINREKVDLCDLVESAVNAIKEFASSHNVNVLFEVPVEAYIDPTRIRQVLLNLLNNGVKYSKKDAYVKVILDEKDGGLIIVEDNGIGIPDHAKDRIFEQFYRVD-------TGLGLAITKEIVELHGGRIWVESVGKGSRFFVWIPKD-
7HHPRED-g2c2a_A0.1920.5073.982threading_7----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MENVTES--KELERLKRIDRMKTEFIANISHELRTPLTAIKAYAETIYNSELDLSTLKEFLEVIIDQSNHLENLLNELLDFSRLERKSLQINREKVDLCDLVESAVNAIKEFASSHNVNVLFESPVEAYIDPTRIRQVLLNLLNNGVKYSKKDAYVKVILDEKGGVLIIVEDNGIGIPDHAKDRIFEQFYRVD-------TGLGLAITKEIVELHGGRIWVESVGKGSRFFVWIPKDR
8SP32c2aa0.1970.5074.250threading_8----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MEN--VTESKELERLKRIDRMKTEFIANISHELRTPLTAIKAYAETIYNSELDLSTLKEFLEVIIDQSNHLENLLNELLDFSRLERKSLQINREKVDLCDLVESAVNAIKEFASSHNVNVLFESNVEAYIDPTRIRQVLLNLLNNGVKYSKKDAYVKVILDEKDGVLIIVEDNGIGIPDHAKDRIFEQFYRVD-------TGLGLAITKEIVELHGGRIWVESEGKGSRFFVWIPKDR
9SAM-T993dgeA0.2050.4875.947threading_9-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KRIDRMKTEFIANISHELRTPLTAIKAYAETIYNSLLDLSTLKEFLEVIIDQSNHLENLLNELLDFSRLERKSLQINREKVDLCDLVESAVNAIKEFASSHNVNVLFESPVEAYIDPTRIRQVLLNLLNNGVKYSAPDKYVKVILDEDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVDSSLTYPGTGLGLAITKEIVELHGGRIWVESEGKGSRFFVWIP---
10MUSTER3a0rA0.1990.6901.543threading_10-------------------------------------------------------------------FSESILESLETAIITLSKDGRITE-KENVLGRRLKDLPDFEEI-GSVAESVFENKEPVFLNFY--KFGERYFNIRFSPFRNAKTQLLEGV---------IITI------------------------------DVTELYKYEEE----------------KRRERLSILGEMTARVAHEIRNPITIIGGFIMRMKKHLDDPETLKKYINIITNELSRLETIVKEILEYSKERV----LEFTEFNLNELIREVYVLFEEKIRKMNIDFCFETDLRVEADRTRIKQVLINLVQNAIEATGENGKIKITSEDMYTVRVSVWNSGPPIPEELKEKIFSPFF----------TTLGLSICRKIIEDEGGKIWTENRENGVVFIFEIPKTP

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.558 to 1ys3B
SCOP code=d.122.1.3
TM-score=0.554 to 1ys3B
SCOP code=d.122.1.3
TM-score=0.548 to 1ys3B
SCOP code=d.122.1.3
TM-score=0.540 to 1ys3B
SCOP code=d.122.1.3
TM-score=0.713 to 1y8pA
SCOP code=a.29.5.1