Template-based Modeling Results for YEHU_ECOLI

Submitted Primary Sequence

>Length 561
MYDFNLVLLLLQQMCVFLVIAWLMSKTPLFIPLMQVTVRLPHKFLCYIVFSIFCIMGTWFGLHIDDSIANTRAIGAVMGGLLGGPVVGGLVGLTGGLHRYSMGGMTALSCMISTIVEGLLGGLVHSILIRRGRTDKVFNPITAGAVTFVAEMVQMLIILAIARPYEDAVRLVSNIAAPMMVTNTVGAALFMRILLDKRAMFEKYTSAFSATALKVAASTEGILRQGFNEVNSMKVAQVLYQELDIGAVAITDREKLLAFTGIGDDHHLPGKPISSTYTLKAIETGEVVYADGNEVPYRCSLHPQCKLGSTLVIPLRGENQRVMGTIKLYEAKNRLFSSINRTLGEGIAQLLSAQILAGQYERQKAMLTQSEIKLLHAQVNPHFLFNALNTIKAVIRRDSEQASQLVQYLSTFFRKNLKRPSEFVTLADEIEHVNAYLQIEKARFQSRLQVNIAIPQELSQQQLPAFTLQPIVENAIKHGTSQLLDTGRVAISARREGQHLMLEIEDNAGLYQPVTNASGLGMNLVDKRLRERFGDDYGISVACEPDSYTRITLRLPWRDEA
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MYDFNLVLLLLQQMCVFLVIAWLMSKTPLFIPLMQVTVRLPHKFLCYIVFSIFCIMGTWFGLHIDDSIANTRAIGAVMGGLLGGPVVGGLVGLTGGLHRYSMGGMTALSCMISTIVEGLLGGLVHSILIRRGRTDKVFNPITAGAVTFVAEMVQMLIILAIARPYEDAVRLVSNIAAPMMVTNTVGAALFMRILLDKRAMFEKYTSAFSATALKVAASTEGILRQGFNEVNSMKVAQVLYQELDIGAVAITDREKLLAFTGIGDDHHLPGKPISSTYTLKAIETGEVVYADGNEVPYRCSLHPQCKLGSTLVIPLRGENQRVMGTIKLYEAKNRLFSSINRTLGEGIAQLLSAQILAGQYERQKAMLTQSEIKLLHAQVNPHFLFNALNTIKAVIRRDSEQASQLVQYLSTFFRKNLKRPSEFVTLADEIEHVNAYLQIEKARFQSRLQVNIAIPQELSQQQLPAFTLQPIVENAIKHGTSQLLDTGRVAISARREGQHLMLEIEDNAGLYQPVTNASGLGMNLVDKRLRERFGDDYGISVACEPDSYTRITLRLPWRDEA
CCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCEEEEEEEEECCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MYDFNLVLLLLQQMCVFLVIAWLMSKTPLFIPLMQVTVRLPHKFLCYIVFSIFCIMGTWFGLHIDDSIANTRAIGAVMGGLLGGPVVGGLVGLTGGLHRYSMGGMTALSCMISTIVEGLLGGLVHSILIRRGRTDKVFNPITAGAVTFVAEMVQMLIILAIARPYEDAVRLVSNIAAPMMVTNTVGAALFMRILLDKRAMFEKYTSAFSATALKVAASTEGILRQGFNEVNSMKVAQVLYQELDIGAVAITDREKLLAFTGIGDDHHLPGKPISSTYTLKAIETGEVVYADGNEVPYRCSLHPQCKLGSTLVIPLRGENQRVMGTIKLYEAKNRLFSSINRTLGEGIAQLLSAQILAGQYERQKAMLTQSEIKLLHAQVNPHFLFNALNTIKAVIRRDSEQASQLVQYLSTFFRKNLKRPSEFVTLADEIEHVNAYLQIEKARFQSRLQVNIAIPQELSQQQLPAFTLQPIVENAIKHGTSQLLDTGRVAISARREGQHLMLEIEDNAGLYQPVTNASGLGMNLVDKRLRERFGDDYGISVACEPDSYTRITLRLPWRDEA
431121011002100000000000010210120122224123100000000000000101002021000101000000011110111000000000012011200000000000000000000001002321223301100000000000100100000000211320030001000010001000000001001122221231211101100200210121133112320022003000320201000001332000000113222112321112101301311100002233232312232303110100000213333000001012232310110020002001200111110121222211102110310122011200000010000003221320130021002001210433221010220021020002001020332020101023301213001000010010003110232232010001022224200010111122233223221100200120012201330001010233220201020124666
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MYDFNLVLLLLQQMCVFLVIAWLMSKTPLFIPLMQVTVRLPHKFLCYIVFSIFCIMGTWFGLHIDDSIANTRAIGAVMGGLLGGPVVGGLVGLTGGLHRYSMGGMTALSCMISTIVEGLLGGLVHSILIRRGRTDKVFNPITAGAVTFVAEMVQMLIILAIARPYEDAVRLVSNIAAPMMVTNTVGAALFMRILLDKRAMFEKYTSAFSATALKVAASTEGILRQGFNEVNSMKVAQVLYQELDIGAVAITDREKLLAFTGIGDDHHLPGKPISSTYTLKAIETGEVVYADGNEVPYRCSLHPQCKLGSTLVIPLRGENQRVMGTIKLYEAKNRLFSSINRTLGEGIAQLLSAQILAGQYERQKAMLTQSEIKLLHAQVNPHFLFNALNTIKAVIRRDSEQASQLVQYLSTFFRKNLKRPSEFVTLADEIEHVNAYLQIEKARFQSRLQVNIAIPQELSQQQLPAFTLQPIVENAIKHGTSQLLDTGRVAISARREGQHLMLEIEDNAGLYQPVTNASGLGMNLVDKRLRERFGDDYGISVACEPDSYTRITLRLPWRDEA
1	PROSPECT2	1qgra	0.110	0.986	1.972	threading_1	MELPTFLVELSRVLAVAGIACAEIPVNQLVANVTNPNSTEHMKESTLEAIGYICAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANSERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASPEHTSKFYAKGALQYLVPILTPCKAAGVCLMLLATCCEDDIVPHVLPFIKRYRDAAVMAFGCILEGPEPSQVIQAMPTLIELMKDPSVVVAINDVYLAPLLQCLIEGLSAEPRVASNVCWAFSSLAEAAYEAADVADDQEEPATYCLSSSFLLETTDRPDGHQNNLRIVKNSAKDCYPAVQKTTLVIMERLQQEVLGGEFLKYMEAFKPFLGIGLKNYAEYQVCLAAVGLVGDLCRALQSNIIPFCDEVMQLLLENLGNENVHRSVKPQILSFGDIALAIGGEFKKYLEVVLNTLQQASQAQVDYDMVDYLNETGIVQGLKGDQENVHPDVMLVQPRVEFILSFIDHIAGDEDHTDGVVACAAGLIGDLCTAFGKDVLKLVEARP--------MIHLKNQA
2	SPARKS	3a0ra	0.106	0.540	1.825	threading_2	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FSESILESLE-TAIITLSKDGRITEWGLKKEKDLPDFEEIGSVAESVFENKEPVFLNFYKFGERYFRNAKTQLLEGVIITIDVTELYKYEEERKRRERLSILGEMTARVAHEIRNPITIIGGFIMRMKKHLDDPETLKKYI-----------------NIITNELSRLETIVKEILEYSKER-VLEFTEFNLNELIREVYVLFE-EKIR-KMNIDFCFETDNEDLRVEADRTRIKQVLINLVQNAIEATGENGKIKITSEDMYTKVRVSVWNSGPPIPEELKETTLGLSICRKIIEDEHGGK--IWTENR-ENGVVFIFEIPKTPEK
3	PPA-I	3a0rA	0.113	0.537	1.252	threading_3	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FSESTAIITLSKDGRITEWGLKKEKDLPDFEEIGSVAESVFENKEPVFLNFYKFGER--------YFNIRFSPFRAKTQLLEGVIITIDELYKYEEERKRRERLSILGEMTARVAHEIRNPITIIGGFIMRMKKHLDDPE-----TLKKYINIITNELSRLETIVKEILEYSKER-VLEFTEFNLNELIREVYVLFEEKIRKMN--IDFCFETDNEDLRVEADRTRIKQVLINLVQNAIEATGENGKIKITSEDMYTKVRVSVWNSGPPIPEELKETTLGLSICRKIIEDEHG---GKIWTENRENGVVFIFEIPKTPEK
4	HHPRED-l	2c2a_A	0.192	0.353	3.411	threading_4	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MEN----VT---ESKELERLKR---IDRMKTEFIANISHELRTPLTAIKAYAEDQSNHLENLLNELLDFSRLERKSNREKVDLCDLVESAVNAIKEFASS--HNVNVLFESNVPCVEAYIDPTRIRQVLLNLLNNGVKYSKKDAYVKVILDEKDGGVLIIVEDNGIGIPDH---TGLGLAITKEIVELHGG---RIWVESEVGKGSRFFVWIPKDR--
5	PROSPECT2	1w63A	0.088	0.911	1.831	threading_5	MPAPIRLRELIRTITQAEEREMIQKECAAIRSSFREEDNTYRCRNVAKLLYMHM-----LGYPAHFGQFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQFVQGLALCTLGCMGSSEMCRDLAG---------EVEKLLKSYLRKKAALCAVHVIRKVPELMEMFLPATKNLLNEKNHGVLHTSVVLLTEMCERSPDMLAHFRKLVPQLVRILKNLIMSGYDPFLQVRILRLLRILGRNDDDSSEAMNDILAQV---ATNTETSKNVGNAILYETVLSESGLRVLAINILGRFLLNNDKNIRYVAL---------------------TSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELLYFLDSCEPEFKADCASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRD--DAVPNLIQLHAYTVQRLYKA---------ILGDYSQQPLVQVAAWCIGEYGDLLVSGQCEEEEPIQVTEDEVLDILESVLISNMSTIMKLSTRFTCTVNRIKKVVSIYGSSIDVNALFKKYDHMRSALLRMPVMEK-
6	SP3	3a0ra	0.112	0.540	1.429	threading_6	------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FSESILESL-ETAIITLSKDGRITEWGLKKENVL-GRRLKDLPDFEEIGSVAESVFENKEPVFLNFYKFGERYFNIRFSPFRNAKTQLEGVIITIDKRRERLSILG-EMTARVAHEIRNPITI---------IGGF-IMRMKKHLDPETLKKYINIITNEL----SRLETIVKEILEYSKE-RVLEFTEFNLNELIREVYVLF---EEKIRKMIDFCFETDNEDLRVEADRTRIKQVLINLVQNAIEATGENGKIKITSEDMYTKVRVSVWNSGPPIPEELKETTLGLSICRKIIEDEHGGK--IWTENR-ENGVVFIFEIPKTPEK
7	PROSPECT2	3ripA	0.074	0.775	1.801	threading_7	MIHELLLASETSVLNRLCRLGTDYIRFTEFIEQYTGHGGLHGIYLRAFCTGLDSVLQPYRQAFLDQFQLLFPSVMVVVEQIKSQKIHGCQ--ILETVYKHSCGGLPPVRSALEKILAVCHGVMYKQLSAQGSLKQFSLRVEILIPVRVAEKILFVGESVQMFEILKNQEDTFAAELHRLKQQPLFSLVDFEQVVDRIRSTVAEHLWKLMVEESDLLGQLKIIKDFYLRGELFQAFIDTAQHMLKTP-------------------PTAVTEHDVNVAFQQSAHKVL---------------LDDDNLLPLLHLTIEYHGASGWAALGLSYKVQWSVRRVQAELQHCWALQMQRKHLKSNQTDAIKWRLRNHMAFLVDNLQYYLQVHFLSNLLAQSFILLKPVFHCLNEILDLFCSLVSQNLLDERGAAQLSILVKGFSRQS-----------------------SLLFK--ILSSVRN-------------------------------------HQINSDLAQLLLRLNKYY----------------------------
8	SAM-T99	1b3qB	0.218	0.294	2.020	threading_8	--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KKYNIKELDESLSHLSRITLDLQN-VVMKIRMVPISFNRFPRMVRDLAKKMNKEVNFIMRGEDTELDR------------------------------------------------------------------------------------TFVEEIGEPLLHLL-----------NAIDHGIKGKPPIGTLILSARHEGNNVVIEVEDDGRGIDKEKIGRGVGMDVVKNVVESLNGS---MGIESEKDKGTKVTIRLPLTLA-
9	PROSPECT2	1gw5b	0.102	0.854	1.793	threading_9	SGEIFELKAELNRKEAVKKVIAAMTVGSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIEDPNPLIRALAVRTMGCIRVD--KITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLH----------DINAQMVE----------DQGFLDSLRDLIADSNPMVVANAVAALSEPNSNLLDLNPQNINKLLTALNECTEWGQIFILDCLDREAQSICERVTPRLSHANSAVVLSAVKVLMKFLELLPKDSDYYNMLLKKLAPPLVTLLSGEPEVQYVALRNINLIVQKRPEILKQEIKVFFVKYN-----------------------DPIYVKLEKLDIMIRIAQVLAELKEYATEVDVDFVRKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKVNYVVQAIVVIRDIFRKYPNKYESIIATLCENPDARAAMIWIVGEYAERIDNADELLESFLEFHDESTQVQLTLLTAIVKLFLKKPSETQELVQQVLSIE------------------------PTLLDELICHIGSLASVYHK-------------PPNAFV
10	SPARKS	3d36a	0.153	0.362	1.388	threading_10	-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GPHMVIRLAASISHEIRNPLTAARGFIQLIEEQPLA-----------------ADKRRQYARIAIEELDRAEAIITDYLTFAKPA-PETPEKLNVKLEIERVIDIL---RPLANMS-CVDIQATLAPFSVIGEREKFRQCLLNVMKNAIEAMPNGGTLQVYVSIDNGRVLIRIADTGVGMTKEQKGTGLGMMVVYRIIESMNG---TIRIESEIHKGTTVSIYLPLAS--

Predicted Tertiary Structure


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TM-score=0.749 to 3ea5B SCOP code=a.118.1.1	TM-score=0.678 to 1qgkA SCOP code=a.118.1.1	TM-score=0.514 to 1ys3B SCOP code=d.122.1.3	TM-score=0.455 to 1lrzA SCOP code=a.2.7.4	TM-score=0.522 to 1ys3B SCOP code=d.122.1.3