Template-based Modeling Results for YFBQ_ECOLI

Submitted Primary Sequence

>Length 405
MSPIEKSSKLENVCYDIRGPVLKEAKRLEEEGNKVLKLNIGNPAPFGFDAPDEILVDVIRNLPTAQGYCDSKGLYSARKAIMQHYQARGMRDVTVEDIYIGNGVSELIVQAMQALLNSGDEMLVPAPDYPLWTAAVSLSSGKAVHYLCDESSDWFPDLDDIRAKITPRTRGIVIINPNNPTGAVYSKELLMEIVEIARQHNLIIFADEIYDKILYDDAEHHSIAPLAPDLLTITFNGLSKTYRVAGFRQGWMVLNGPKKHAKGYIEGLEMLASMRLCANVPAQHAIQTALGGYQSISEFITPGGRLYEQRNRAWELINDIPGVSCVKPRGALYMFPKIDAKRFNIHDDQKMVLDFLLQEKVLLVQGTAFNWPWPDHFRIVTLPRVDDIELSLSKFARFLSGYHQL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400

Download Primary Sequence

Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSPIEKSSKLENVCYDIRGPVLKEAKRLEEEGNKVLKLNIGNPAPFGFDAPDEILVDVIRNLPTAQGYCDSKGLYSARKAIMQHYQARGMRDVTVEDIYIGNGVSELIVQAMQALLNSGDEMLVPAPDYPLWTAAVSLSSGKAVHYLCDESSDWFPDLDDIRAKITPRTRGIVIINPNNPTGAVYSKELLMEIVEIARQHNLIIFADEIYDKILYDDAEHHSIAPLAPDLLTITFNGLSKTYRVAGFRQGWMVLNGPKKHAKGYIEGLEMLASMRLCANVPAQHAIQTALGGYQSISEFITPGGRLYEQRNRAWELINDIPGVSCVKPRGALYMFPKIDAKRFNIHDDQKMVLDFLLQEKVLLVQGTAFNWPWPDHFRIVTLPRVDDIELSLSKFARFLSGYHQL
CCCCCHHHHHHCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCEEEEEECCHHHCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHEEECCCCCCCHHHCCCCCCEEEECCCHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MSPIEKSSKLENVCYDIRGPVLKEAKRLEEEGNKVLKLNIGNPAPFGFDAPDEILVDVIRNLPTAQGYCDSKGLYSARKAIMQHYQARGMRDVTVEDIYIGNGVSELIVQAMQALLNSGDEMLVPAPDYPLWTAAVSLSSGKAVHYLCDESSDWFPDLDDIRAKITPRTRGIVIINPNNPTGAVYSKELLMEIVEIARQHNLIIFADEIYDKILYDDAEHHSIAPLAPDLLTITFNGLSKTYRVAGFRQGWMVLNGPKKHAKGYIEGLEMLASMRLCANVPAQHAIQTALGGYQSISEFITPGGRLYEQRNRAWELINDIPGVSCVKPRGALYMFPKIDAKRFNIHDDQKMVLDFLLQEKVLLVQGTAFNWPWPDHFRIVTLPRVDDIELSLSKFARFLSGYHQL
553233022133012212010021023024323300101011112210400320010003103212210214102101300031033313230113000000101200010010002311100000010000100021131100102023222121113102330133010000001211201101330012002003413000001100110012213110002013210000010002002000020000001011210100020021112231011000010011102223202201210120120021003102403101013130000000202234231320220022003221000021111222121000000003121022002101200211344
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MSPIEKSSKLENVCYDIRGPVLKEAKRLEEEGNKVLKLNIGNPAPFGFDAPDEILVDVIRNLPTAQGYCDSKGLYSARKAIMQHYQARGMRDVTVEDIYIGNGVSELIVQAMQALLNSGDEMLVPAPDYPLWTAAVSLSSGKAVHYLCDESSDWFPDLDDIRAKITPRTRGIVIINPNNPTGAVYSKELLMEIVEIARQHNLIIFADEIYDKILYDDAEHHSIAPLAPDLLTITFNGLSKTYRVAGFRQGWMVLNGPKKHAKGYIEGLEMLASMRLCANVPAQHAIQTALGGYQSISEFITPGGRLYEQRNRAWELINDIPGVSCVKPRGALYMFPKIDAKRFNIHDDQKMVLDFLLQEKVLLVQGTAFNWPWPDHFRIVTLPRVDDIELSLSKFARFLSGYHQL
1	MUSTER	1xi9C	0.395	0.968	3.316	threading_1	----RASKRALSVEYAIR-DVVLPARELEKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEGHNYGDSEGLPELRKAIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEG-EHISPGSLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSEVREAIDRLARIRLCPNTPAQFAAIAGLTG--PMDYLKEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPKIEVGP--WKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFLPPIEILEEAMDRFEKFMKER---
2	SPARKS	3pdxa	0.242	0.919	3.578	threading_2	--------------------------KVKPNNKTVISLSIGDPTVFGLPTDPEVTQAMKDALDSGKGYAPSIGYLSSREEVASYYHCPEA-PLEAKDVILTSGCSQAIELCLAVLANPGQNILIPRPGFSLYRTLAESMGIEVKLYNLLPEKSWEIDLKQLESLIDEKTACLVVNNPSNPCGSVFSKRHLQKILAVAERQCVPILADEIYGDMVFSDCKYEPMATLSTNVPILSCGGLAR-WLVPGWRLGWILIHDRRDIFGNEIDGLVKLSQRILGPCTIVQGALKSILQR-TPQEFYQDTLSFLKSNADLCYGALSAIPGLQPVRPSGAMYLMVGIEMEHFPFENDVEFTERLIAEQSVHCLPATCFEY--PNFFRVVITVPEVMMLEACSRIQEFCEQHY--
3	PROSPECT2	3dydA	0.240	0.946	4.465	threading_3	WS------------------VRPSDKVKPNPNKTMISLSIGDPTVFNLPTDPEVTQAMKDALDSGNGYAPSIGFLSSREEIASYYHCPE-APLEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSWEIDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEIDGLVKLSQRILGPCTIVQGALKSILCRTPG-EFYHNTLSFLKSNADLCYGALAAIPGLRPVRPSGAMYLMVGIEMEFPEFENDVEFTERLVAEQSVHCLPATCFEY--PNFIRVVITVPEVMMLEACSRIQEFCEQHYHC
4	PPA-I	1xi9C	0.395	0.968	4.262	threading_4	----RASKRALSVEYAIR-DVVLPARELEKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEGHNYGDSEGLPELRKAIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEG-EHISPGSLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSEVREAIDRLARIRLCPNTPAQFAAIAGLTG--PMDYLKEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPKIE--VGPWKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFLPPIEILEEAMDRFEKFMKER---
5	HHPRED-l	1xi9_A	0.390	0.956	2.110	threading_5	--SIRASKRALSVEY--------PARELEKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEGNYYGDSEGLPELRKAIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEH-ISPGSLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSEVREAIDRLARIRLCPNTPAQFAAIAGLTGPM--DYLKEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPKIEVGP--WKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFLPPIEILEEAMDRFEKFMKER---
6	HHPRED-g	1xi9_A	0.399	0.953	1.991	threading_6	--SIRASKRALSVEY--------PARELEKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEGNYYGDSEGLPELRKAIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEG-EHISPGSLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSEVREAIDRLARIRLCPNTPAQFAAIAGLTGPMDLKEYM---KKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPKIE--VGPWKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFLPPIEILEEAMDRFEKFMKER---
7	SP3	3pdxa	0.242	0.919	3.589	threading_7	--------------------------KVKPPNKTVISLSIGDPTVFGLPTDPEVTQAMKDALDSGKGYAPSIGYLSSREEVASYYHCPEA-PLEAKDVILTSGCSQAIELCLAVLANPGQNILIPRPGFSLYRTLAESMGIEVKLYNLLPEKSWEIDLKQLESLIDEKTACLVVNNPSNPCGSVFSKRHLQKILAVAERQCVPILADEIYGDMVFSDCKYEPMATLSTNVPILSCGGLAR-WLVPGWRLGWILIHDRRDIFGNEIDGLVKLSQRILGPCTIVQGALKSILQRT-PQEFYQDTLSFLKSNADLCYGALSAIPGLQPVRPSGAMYLMVGIEMEHFPFENDVEFTERLIAEQSVHCLPATCFEY--PNFFRVVITVPEVMMLEACSRIQEFCEQHY--
8	SAM-T99	1xi9C	0.391	0.965	3.858	threading_8	----RASKRALSVEYA-IRDVVLPARELEKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCKIKEGHNYYGDSEGLPELRKAIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEG-EHISPGSLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSEVREAIDRLARIRLCPNTPAQFAAIAGLTGPMD--YLKEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPKIEV--GPWKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFLPPIEILEEAMDRFEKFMKE----
9	MUSTER	3dydA	0.238	0.946	3.018	threading_9	------------------WSVRPSDKVKPNPNKTMISLSIGDPTVFNLPTDPEVTQAMKDALDSGKGYAPSIGFLSSREEIASYYHCPEA-PLEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSWEIDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRIFGNEIRDGLVKLSQRILGPCTIVQGALKSILCRT-PGEFYHNTLSFLKSNADLCYGALAAIPGLRPVRPSGAMYLMVGIEMEHFPFENDVEFTERLVAEQSVHCLPATCFEY--PNFIRVVITVPEVMMLEACSRIQEFCEQHYHC
10	SPARKS	1xi9a	0.393	0.956	3.237	threading_10	--SIRASKRALSVE--------YPARELEKKGIKVIRLNIGDPVKFDFQPPEHMKEAYCKAIKEGHYYGDSEGLPELRKAIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEG-EHISPGSLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSEVREAIDRLARIRLCPNTPAQFAAIAGLTGPMDY--LKEYMKKLKERRDYIYKRLNEIPGISTTKPQGAFYIFPKIE--VGPWKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFLPPIEILEEAMDRFEKFMKER---

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.980 to 1xi9C SCOP code=c.67.1.1	TM-score=0.980 to 1xi9C SCOP code=c.67.1.1	TM-score=0.893 to 1bw0B SCOP code=c.67.1.1	TM-score=0.891 to 1xi9C SCOP code=c.67.1.1	TM-score=0.979 to 1xi9C SCOP code=c.67.1.1