Template-based Modeling Results for YFCP_ECOLI

Submitted Primary Sequence

>Length 179
MNKSMIQSGGYVLLAGLILAMSSTLFAADNNLHFSGNLLSKSCALVVDGQYLAEVRFPTVSRQDLNVAGQSARVPVVFKLKDCKGPAGYNVKVTLTGVEDSEQPGFLALDTSSTAQGVGIGMEKTDGMQVAINNTNGATFALTNGNNDINFRAWLQAKSGRDVTIGEFTASLTATFEYI
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

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Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNKSMIQSGGYVLLAGLILAMSSTLFAADNNLHFSGNLLSKSCALVVDGQYLAEVRFPTVSRQDLNVAGQSARVPVVFKLKDCKGPAGYNVKVTLTGVEDSEQPGFLALDTSSTAQGVGIGMEKTDGMQVAINNTNGATFALTNGNNDINFRAWLQAKSGRDVTIGEFTASLTATFEYI
CCHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEEEEEEECCCCEEECCCCCEEEEECCCEEHHHCCCCCEECCEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCCEEECCCCCCCCCEEEEECCCCCEECCCCCCCCEEECCCCCEEEEEEEEEEEECCCCCCEEEEEEEEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

Download Predicted 3-state Secondary Structure Types

Predicted Solvent Accessibility

>0-buried to 9-exposed
MNKSMIQSGGYVLLAGLILAMSSTLFAADNNLHFSGNLLSKSCALVVDGQYLAEVRFPTVSRQDLNVAGQSARVPVVFKLKDCKGPAGYNVKVTLTGVEDSEQPGFLALDTSSTAQGVGIGMEKTDGMQVAINNTNGATFALTNGNNDINFRAWLQAKSGRDVTIGEFTASLTATFEYI
42321110000000000000000100014120201020022101011423320202012002320332121231101010220413112202000111322323110001222213110000122312202133222220112422110101000102123302102010102010212
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170

Download Predicted Solvent Accessibility

Top 10 Templates

Rank	Method	Template	Identity	Coverage	N-Zscore	Threading Alignment	MNKSMIQSGGYVLLAGLILAMSSTLFAADNNLHFSGNLLSKSCALVVDGQYLAEVRFPTVSRQDLNVAGQSARVPVVFKLKDCKGPAGYNVKVTLTGVEDSEQPGFLALDTSSTAQGVGIGMEKTDGMQVAINNTNGATFALTNGNNDINFRAWLQAKSGRDVTIGEFTASLTATFEYI
1	MUSTER	2jtyA	0.247	0.860	2.036	threading_1	----------------------AATTVNGGTVHFKGEVVNAACAVDAGSVD-QTVQLGQVRTASLAQEGATSAVGFNIQLNDCDTNVASKAAVAFLGTADAGHTNVLALQSSGSATNVGVQILDRTGAALTLDATFSSETTLNNGTNTIPFQARYFAT--GAATPGAANADATFKVQYQ
2	SPARKS	3jwne	0.309	0.832	4.056	threading_2	---------------------------ADSTITIRGYVRDNGCSVAAESTN-FTVDLMENAAKQFNNIGTTPVVPFRILLSPCGNAV-SAVKVGFTGVADSHNANLLALETVSAAAGLGIQLLNEQQNQIPLNAPSSATTLTPGKPNTLNFYARLMAT-QVPVTAGHINATATFTLEYQ
3	PROSPECT2	2j2zB	0.168	0.799	2.190	threading_3	------------------------------RAAFHGEVVRPACTLAMEDAW-QIIDMGETPVRDLQNGFSGPERKFSLRLRNCEFFSDSRIRVTFDGVRGETPDK---FNLSGQAKGINLQIADVRGNIARAGKVMPA-IPLTGNEEALDYTLRIVR-NGKKLEAGNYFAVLGFRVDYE
4	PPA-I	2j2zB	0.168	0.799	2.612	threading_4	------------------------------RAAFHGEVVRPACTLAMEDAWQ-IIDMGETPVRDLQNGFSGPERKFSLRLRNCEFFSDSRIRVTFDGVRGETPDK---FNLSGQAKGINLQIADVRGNIARAGKVMPA-IPLTGNEEALDYTLRIVRN-GKKLEAGNYFAVLGFRVDYE
5	HHPRED-l	2uy6_B	0.197	0.793	3.961	threading_5	------------------------------KVTFNNTVVDAPCSISQKSADQSIDF-GQLSKSFLAGGV-SKPMDLDIELVNCDITAFKTVKLAFTGPIVNGHSDELDTN--GGTGL-AIVV-QGAGKNVVFDGSEGDANTLKDGENVLHYTAVVKKSVGAAVTEGAFSAVANFNLTY-
6	HHPRED-g	2uy6_B	0.208	0.804	4.156	threading_6	------------------------------KVTFNNTVVDAPCSISQKSAD-QSIDFGQLSKSFLEAGGVSKPMDLDIELVNCDITAFKTVKLAFTGPIVNGHSDELDTN--GGTGL-AIVV-QGAGKNVVFDGSEGDANTLKDGENVLHYTAVVKKSVGAAVTEGAFSAVANFNLTYQ
7	SP3	3jwne	0.309	0.832	3.862	threading_7	---------------------------ADSTITIRGYVRDNGCSVAAESTN-FTVDLMENAAKQFNNIGTTPVVPFRILLSPCGNAV-SAVKVGFTGVADSHNANLLALETVSAAAGLGIQLLNEQQNQIPLNAPSSATTLTPGKPNTLNFYARLMA-TQVPVTAGHINATATFTLEYQ
8	SAM-T99	2jtyA	0.262	0.832	4.445	threading_8	--------------------------AATGTVHFKGEVVNAACAVDA-GSVDQTVQLGQVRTASLAQEGATSSAGFNIQLNDCDTNVASKAAVAFLGTADAGHTNVLALQAAGSATNVGVQILDRTGAALTLDATFSSETTLNNGTNTIPFQARYFATG--AATPGAANADATFKVQY-
9	MUSTER	2jmrA	0.307	0.838	2.001	threading_9	--------------------------MADSTITIRGYVRDNGCSVAAESTN-FTVDLMENAAKQFNNIGTTPVVPFRILLSPCGNAV-SAVKVGFTGVADSHNANLLALETVSAASGLGIQLLNEQQNQIPLNAPSSATTLTPGKPNTLNFYARLMATQV-PVTAGHINATATFTLEYQ
10	SPARKS	2jtya	0.240	0.860	3.661	threading_10	----------------------AATTVNGGTVHFKGEVVNAACAVDAGSV-DQTVQLGQVRTASLAQEGTSSAVGFNIQLNDCDTNVASKAAVAFLGTADAGHTNVLALSAAGSATNVGVQILDRTGAALTLDGATSSETTLNNGTNTIPFQARYFAT--GAATPGAANADATFKVQYQ

Predicted Tertiary Structure


Download Model 1	Download Model 2	Download Model 3	Download Model 4	Download Model 5
TM-score=0.679 to 1pdkB SCOP code=b.2.3.2	TM-score=0.825 to 2uy7B SCOP code=b.2.3.2	TM-score=0.694 to 1klfP SCOP code=b.2.3.2	TM-score=0.802 to 2j2zB SCOP code=b.2.3.2	TM-score=0.797 to 2j2zB SCOP code=b.2.3.2