Template-based Modeling Results for YFCQ_ECOLI


  Submitted Primary Sequence

>Length 162
MRKTFLTLLCVSSAIAHAADEDITFHGTLLSPPTCSISGGKTIEVEFRDLIIDDINGNYGRKEVPYELTCDSTTRHPDWEMTLTWTGTQTSFNDAAIETDVPGFGIELQHDGQRFKLNTPLAINATDFTQKPKLEAVPVKASDAVLSDTNFSAYATLRVDYQ
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MRKTFLTLLCVSSAIAHAADEDITFHGTLLSPPTCSISGGKTIEVEFRDLIIDDINGNYGRKEVPYELTCDSTTRHPDWEMTLTWTGTQTSFNDAAIETDVPGFGIELQHDGQRFKLNTPLAINATDFTQKPKLEAVPVKASDAVLSDTNFSAYATLRVDYQ
CHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCEEECCCEEEEEECCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCEEEEEEECCCCCCCCCEEEECCCCEEEEEEECCCEECCCCCEEECCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEEEEEEEC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MRKTFLTLLCVSSAIAHAADEDITFHGTLLSPPTCSISGGKTIEVEFRDLIIDDINGNYGRKEVPYELTCDSTTRHPDWEMTLTWTGTQTSFNDAAIETDVPGFGIELQHDGQRFKLNTPLAINATDFTQKPKLEAVPVKASDAVLSDTNFSAYATLRVDYQ
321001000000000021123201020101022101023121020102201132032321222010200021123423110101021232222310010212100000112123032221010122322320201000122232212302010001020123
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMRKTFLTLLCVSSAIAHAADEDITFHGTLLSPPTCSISGGKTIEVEFRDLIIDDINGNYGRKEVPYELTCDSTTRHPDWEMTLTWTGTQTSFNDAAIETDVPGFGIELQHDGQRFKLNTPLAINATDFTQKPKLEAVPVKASDAVLSDTNFSAYATLRVDYQ
1MUSTER2jmrA0.1820.8831.575threading_1-----------------MADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFNNIGATPVVPFRILLSPCGNAVSA-VKVGFTGVADSHNANLLALEASGLGIQLLNQQNQIPLNAPWTTLTPGKPNTLNFYARLMA-TQVPVTAGHINATATFTLEYQ
2SPARKS3jwne0.1830.8773.118threading_2------------------ADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFNNIGATPVVPFRILLSPCGNAVS-AVKVGFTGVADSHNANLLALENTGLGIQLLNQQNQIPLNAPWTTLTPGKPNTLNFYARLMA-TQVPVTAGHINATATFTLEYQ
3PROSPECT22w07B0.1830.7411.726threading_3N----------------------------VYIPPCTINNGQNIVVDFGNINPEHVDNSRGEVTKTISISCPYGS------LWIKVTGNMGGGQNNVLATNITHFGIALYQGK-----GMSTPLT---LRSTFTFTSVPFRNGSGILNGGDFRTTASMSMIYN
4PPA-I2j2zB0.1710.8642.446threading_4---------------------RAAFHGEVVRPACTLAMEDAWQIIDMGETPVRDLQNGFSGPERKFSLRLRNCELFSDSRIRVTFDGVRGETPDKFLSGQAKGINLQIADRGNIARAGKMPAIPLTGNEEALDYTLRIVR-NGKKLEAGNYFAVLGFRVDYE
5HHPRED-l2uy6_B0.1730.8584.104threading_5---------------------KVTFNNTVVDAPCSISQKSADQSIDFGQLSKSFLEAGGVSKPMDLDIELVNCDITAFKTVKLAFTGPIVNGHSDELDGGTGL-AIVVQGAGKNVVFDGSDANTLKDGENVLHYTAVVKKSVGAAVTEGAFSAVANFNLTY-
6HHPRED-g2uy6_B0.1800.8583.918threading_6---------------------KVTFNNTVVDAPCSISQKSADQSIDFGQLSKSFLEAGGVSKPMDLDIELVNCDITAFKTVKLAFTGPIVNGHSDELDTGTGL-AIVV-QAGKNVVFDGEGANTLKDGENVLHYTAVVKKSVGAAVTEGAFSAVANFNLTYQ
7SP33jwne0.1830.8773.136threading_7------------------ADSTITIRGYVRDNGCSVAAESTNFTVDLMENAAKQFNNIGATTVVPFRILLSPCGNAV-SAVKVGFTGVADSHNANLLALEAAGLGIQLLEQQNQIPLNAPWTTLTPGKPNTLNFYARLMA-TQVPVTAGHINATATFTLEYQ
8SAM-T992w07B0.1930.7352.454threading_8---------------------------NVYIP-PCTINNGQNIVVDFGNINPEHVDNSRGEVTKTISISCPYG------SLWIKVTGNTMGGGQNVLATNITHFGIALYGKGM------STPLTL---RSTFTFTSVPFRNGSGILNGGDFRTTASMSMIYN
9MUSTER2j2zB0.1710.8641.543threading_9---------------------RAAFHGEVVRPACTLAMEDAWQIIDMGETPVRDLQNGFSGPERKFSLRLRNCEFNSDSRIRVTFDGVRGETPDKFLSGQAKGINLQIADRGNIARAGKVMAIPLTGNEEALDYTLRIVR-NGKKLEAGNYFAVLGFRVDYE
10SPARKS2uy6b0.1990.8703.107threading_10---------------------KVTFNNTVVDAPCSISQKSADQSIDFGQLSKSFLEAGGVSKPMDLDIELVNCDITAKGTVKLAFTGPIVNGHSDELDTGGTGLAIVVQGAGKNVVFDEGDANTLKDGENVLHYTAVVKKAVGAAVTEGAFSAVANFNLTYQ

  Predicted Tertiary Structure

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TM-score=0.706 to 1pdkB
SCOP code=b.2.3.2
TM-score=0.825 to 2j2zB
SCOP code=b.2.3.2
TM-score=0.702 to 1klfP
SCOP code=b.2.3.2
TM-score=0.595 to 1pdkB
SCOP code=b.2.3.2
TM-score=0.818 to 2j2zB
SCOP code=b.2.3.2