Template-based Modeling Results for TRMN6_ECOLI


  Submitted Primary Sequence

>Length 245
MSQSTSVLRRNGFTFKQFFVAHDRCAMKVGTDGILLGAWAPVAGVKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHTADIQQWITQQTVRFDLIISNPPYYQQGVECSTPQREQARYTTTLDHPSLLTCAAECITEEGFFCVVLPEQIGNGFTELALSMGWHLRLRTDVAENEARLPHRVLLAFSPQAGECFSDRLVIRGPDQNYSEAYTALTQAFYLFM
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSQSTSVLRRNGFTFKQFFVAHDRCAMKVGTDGILLGAWAPVAGVKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHTADIQQWITQQTVRFDLIISNPPYYQQGVECSTPQREQARYTTTLDHPSLLTCAAECITEEGFFCVVLPEQIGNGFTELALSMGWHLRLRTDVAENEARLPHRVLLAFSPQAGECFSDRLVIRGPDQNYSEAYTALTQAFYLFM
CCCCHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCEEEEEECHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MSQSTSVLRRNGFTFKQFFVAHDRCAMKVGTDGILLGAWAPVAGVKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHTADIQQWITQQTVRFDLIISNPPYYQQGVECSTPQREQARYTTTLDHPSLLTCAAECITEEGFFCVVLPEQIGNGFTELALSMGWHLRLRTDVAENEARLPHRVLLAFSPQAGECFSDRLVIRGPDQNYSEAYTALTQAFYLFM
55322211221100222000123310120101000000002122221000000000000000023033211010010223001101200331312210100001022003323220000000011034223121132121312220201100200130033300000000220020002003212131200010133433201000010023334222320001233331030002002201113
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMSQSTSVLRRNGFTFKQFFVAHDRCAMKVGTDGILLGAWAPVAGVKRCLDIGAGSGLLALMLAQRTDDSVMIDAVELESEAAAQAQENINQSPWAERINVHTADIQQWITQQTVRFDLIISNPPYYQQGVECSTPQREQARYTTTLDHPSLLTCAAECITEEGFFCVVLPEQIGNGFTELALSMGWHLRLRTDVAENEARLPHRVLLAFSPQAGECFSDRLVIRGPDQNYSEAYTALTQAFYLFM
1MUSTER3lpmA0.1600.8692.361threading_1LKLIGD-ERLDYLLAENLRIIQSPSVFSFSIDAVLLAKFSYLIRKGKIIDLCSGNGIIPLLLSTRTK--AKIVGVEIQ-ERLADAKRSVAYNQLEDQIEIIEYDLKKITDLIPERADIVTCNPP----------------------TLEDTIRVAASLLKQGGKANFVHRPERLLDIIDI-RKYRLEPKRIQFVHPRSDREANTVLVEGIKDPGVKYVPPVIVYDELGEYTPVIKEILYG-----
2SPARKS3lpma0.1560.8653.232threading_2LIGD---ERLDYLLAENLRIIQSPSVFSFSIDAVLLAKFSYLPRKGKIIDLCSGNGIIPLLLSTRTK--AKIVGVEIQERLAD-AKRSVAYNQLEDQIEIIEYDLKKITDLIPERADIVTCNPP---------------------CTLEDTIRVAASLLKQGGKANFVHRPERLLDIID-IRKYRLEPKRIQFVHPRSDREANTVLVEGIKDPGVKYVPPVIVYDELGEYTPVIKEILYG-----
3PROSPECT23lpmA0.1530.8783.292threading_3KLKLIGDERLDYLLAENLRIIQSPSVFSFSIDAVLLAKFSYLIRKGKIIDLCSGNGIIPLLLSTRTK--AKIVGVEIQERLAD-AKRSVAYNQLEDQIEIIEYDLKKITDLIPERADIVTCNPPCT---------------------LEDTIRVAASLLKQGGKANFVHRPERLLDIID-IRKYRLEPKRIQFVHPRSDREANTVLVEGIGKPGVKYVPPVIVYDELGEYTPVIKEILYG-----
4PPA-I3lpmA0.1600.8653.008threading_4LIGD---ERLDYLLAENLRIIQSPSVFSFSIDAVLLAKFSYLPRKGKIIDLCSGNGIIPLLLSTRTK--AKIVGVEIQ-ERLADAKRSVAYNQLEDQIEIIEYDLKKITDLIPERADIVTCNPP---------------------CTLEDTIRVAASLLKQGGKANFVHRPERLLDIIDIR-KYRLEPKRIQFVHPRSDREANTVLVEGIKKPGVKYVPPVIVYDELGEYTPVIKEILYG-----
5HHPRED-l2ozv_A0.1960.7512.017threading_5-------------------------------DA-LLASLVADDRACRIADLGAGAGAAG-AVAARL-EKAEVTLYERSQE-AEFARRSLELPAFSARIEVLEADVTLRAKLPDEHFHHVI-NPPY--------------------GLFEDWIRTASAI-VSGGQLSLISRPQSVAEIIAACGSR-FGGLEITLIHPRPGEDAVR-LVTAIKGSRLTFRAPLI-HETGSHFTPFVDDLNNGRAAY-
6HHPRED-g2ozv_A0.1950.7552.561threading_6-------------------------------DA-LLASLVADDRACRIADLGAGAGAAG-AVAARLE-KAEVTLYERSQE-AEFARRSLELPAFSARIEVLEADVTLRAKLPDEHFHHVI-NPPY--------------------GLFEDWIRTASAI-VSGGQLSLISRPQSVAEIIAACGSR-FGGLEITLIHPRPGEDAVR-LVTAIKGSRLTFRAPLI-HETGSHFTPFVDDLNNGYARNV
7SP33lpma0.1540.8733.617threading_7LKLIGD-ERLDYLLAENLRIIQSPSVFSFSIDAVLLAKFSYLPRKGKIIDLCSGNGIIPLLLSTRTK--AKIVGVEIQERLAD-AKRSVAYNQLEDQIEIIEYDLKKITDLIPKRADIVTCNPPC---------------------TLEDTIRVAASLLKQGGKANFVHRPERLLDIID-IRKYRLEPKRIQFVHPRSDREANTVLVEGIKKPGVKYVPPVIVYDELGEYTPVIKEILYG-----
8SAM-T993lpmA0.1530.8783.521threading_8KLKLIGDERLDYLLAENLRIIQSPSVFSFSIDAVLLAKFSYLIRKGKIIDLCSGNGIIPLLLSTRTK--AKIVGVEIQERLAD-AKRSVAYNQLEDQIEIIEYDLKKITDLIPERADIVTCNPP---------------------CTLEDTIRVAASLLKQGGKANFVHRPERLLDIIDIR-KYRLEPKRIQFVHPRSDREANTVLVEGIKKPGVKYVPPVIVYDELGEYTPVIKEILYG-----
9MUSTER2ozvB0.1720.7591.549threading_9-------------------------------DALLAS-LVADDRACRIADLGAGAGAAGAVAARL--EKAEVTLYERSQE-AEFARRSLELAAFSARIEVLEADVTLRAKARPDEHFHHVINPPY---------------------LFEDWIRTASAIV-SGGQLSLISRPQSVAEIIAACGS-RFGGLEITLIHPRPGEDA-VRLVTAIKGARLTFRAPLIHETGSHAFTPFVDDLNNGYARNV
10SPARKS1nv8a0.1680.8241.954threading_10GYPLHYILGEKEFMGLSFLVEEGVFVPRPETEELVELALELIRGIKTVADIGTGSGAIGVSVAKFS--DAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFKEKFASIEMILSNPPYVKSSAHLPKDVLPEALFGGEDGLDFYREFFGRYDTSGKIVLMEIGEDQVEELKKIVSDTVF-------LKDSAGK--YRFLLLNRRSS--------------------------------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.715 to 1dusA
SCOP code=c.66.1.4
TM-score=0.725 to 1dusA
SCOP code=c.66.1.4
TM-score=0.728 to 1dusA
SCOP code=c.66.1.4
TM-score=0.698 to 1dusA
SCOP code=c.66.1.4
TM-score=0.723 to 1dusA
SCOP code=c.66.1.4