Template-based Modeling Results for YFJV_ECOLI


  Submitted Primary Sequence

>Length 338
RALFTWKVLLGAAVDALFANDGAALILTPIVIAMLIALGFSQGTTLAFVMAAGFIADTASLPLIVSNLVNIVSADFFGLSFAQYASVMISVDAAAIAATLIMLYLFFRRVIPATYXVSLLKTPASAIKDLATFRAGWIVLLLLLVGFFFLEPQGILVSAIAAAGAAVLFVVAKRGHSINTGKVLRGAPWQIVIFSLGMYIVVYGLRNAGFTEYLSGVLNLLADKGLWAATFGTGFLTAFLSSVMNNMPTVLIGALSIDGSTATGVVKEAMIYANVIGCDLGPKITPIGSLATLLWLHVLAQKNMTITWGYYFRTGIVMTVPVLFVTLAALAWRLSVTL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
RALFTWKVLLGAAVDALFANDGAALILTPIVIAMLIALGFSQGTTLAFVMAAGFIADTASLPLIVSNLVNIVSADFFGLSFAQYASVMISVDAAAIAATLIMLYLFFRRVIPATYXVSLLKTPASAIKDLATFRAGWIVLLLLLVGFFFLEPQGILVSAIAAAGAAVLFVVAKRGHSINTGKVLRGAPWQIVIFSLGMYIVVYGLRNAGFTEYLSGVLNLLADKGLWAATFGTGFLTAFLSSVMNNMPTVLIGALSIDGSTATGVVKEAMIYANVIGCDLGPKITPIGSLATLLWLHVLAQKNMTITWGYYFRTGIVMTVPVLFVTLAALAWRLSVTL
CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
RALFTWKVLLGAAVDALFANDGAALILTPIVIAMLIALGFSQGTTLAFVMAAGFIADTASLPLIVSNLVNIVSADFFGLSFAQYASVMISVDAAAIAATLIMLYLFFRRVIPATYXVSLLKTPASAIKDLATFRAGWIVLLLLLVGFFFLEPQGILVSAIAAAGAAVLFVVAKRGHSINTGKVLRGAPWQIVIFSLGMYIVVYGLRNAGFTEYLSGVLNLLADKGLWAATFGTGFLTAFLSSVMNNMPTVLIGALSIDGSTATGVVKEAMIYANVIGCDLGPKITPIGSLATLLWLHVLAQKNMTITWGYYFRTGIVMTVPVLFVTLAALAWRLSVTL
51100000000000000011100000000000000210212322000000000000101000010111100000100101002000000000000000000000000031022220222242212212121001000000000000000121110210000000000000003223222102003202020000000000001002200012000000010133021000000000000001001101000000100211112211210000000000100210000000000000200332412010010010000000000000000000212123
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentRALFTWKVLLGAAVDALFANDGAALILTPIVIAMLIALGFSQGTTLAFVMAAGFIADTASLPLIVSNLVNIVSADFFGLSFAQYASVMISVDAAAIAATLIMLYLFFRRVIPATYXVSLLKTPASAIKDLATFRAGWIVLLLLLVGFFFLEPQGILVSAIAAAGAAVLFVVAKRGHSINTGKVLRGAPWQIVIFSLGMYIVVYGLRNAGFTEYLSGVLNLLADKGLWAATFGTGFLTAFLSSVMNNMPTVLIGALSIDGSTATGVVKEAMIYANVIGCDLGPKITPIGSLATLLWLHVLAQKNMTITWGYYFRTGIVMTVPVLFVTLAALAWRLSVTL
1PROSPECT21ejlI0.1040.9941.722threading_1EDIVKGILQATQAARKLLSREIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTGGAIPAFISLLASPH--AHISEQAVWALGNIAGDGSAFRDLVIKHGAIDPLLALLAVPDLSTLACGYLRNLTWTLSNLQILPTLVRLLHHNDPEVLADSCWAISYLTDGPKKGVVPQLVKLLELPIVTPALRAIGQTQKVIDAGALAVFTWTMSNITAGRQDQIQQVVNLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVPLMNLLSAKDTKIIQVILDAISNIFQAAEKLGETEKLSIMGGLDKIEALQVYKASLNLIEKYFS
2PROSPECT21jdha0.1040.9941.662threading_2HAIMRSPQMVSAIVRTMQNTNDVETARC-TAGTLHNLSHHREGLLAIFSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVALLNVKFLAITTDCLQILAYGNQESKLIILASGGPQALVNIMRTYTYEKLLWTTSRVLKVLGMQALGLHLTDPSQRLVQNCLWTLRNLSDAATKQEGMEGLLGTLDINVVTCAAGILSNKMMVCQVGGIEALVRTVLRA-GDREDITEPAICALRHLTSRHQEAEMAQNAVLPVVVKLLHPPSHWPLIKATVGLIRNLALCPAAIPRLVQLLVRAHQDTQFVEGVRMEEIVEGCTGALHILIQRVAAGVLCELAQD
3PROSPECT23a6pA10.0690.9441.638threading_3AMRHFGLQILEHVVKFRWNSRLEKVYLKNSVMELIANGTLNILEEENHIKDALSRIVV-----------EMIKREWPQHDMLIELDTLSKQGETQTELVMFILLRLAEDVVTFQTLPPQRRRDIQQTLTQNMERIFSFLLNTLQENVNKYQQVKTSKAQANCRVGVAALNTLAGYIDWVSMSHITAENCKLLEILCLL------LNEQELQLGAAECLLIAVSRKPLMVLFGDVAMHYILSAAQTACALGNQLCALLGADSDVETPSNFGKYLESFLAFTTHPSQFLRSSTQMTWGALFRHEILSRD--PLLLAIIPKYLRASMTNLSCEYSRFDFDS
4PROSPECT21ee4a0.1000.9761.630threading_4QELPQMTQQLLSATVKFRQRPPIDVVIQAGVVPRLVEFMRENQPEMLQLEAAWALTNIAS-----GTSAQTKVVVDADALFIQLLYTGSVEVKEQAIWALGNVRDYVLQCNAMEPILGLFNSNKPSLPDWSVVSQALPTLTLVDACWAISYLSDGPQEAIQAVIDVRIPKRLVELLSHESTLVQTPALRAVGNIVTGNDLQTQVVINAGVLPALCWTISNITAGNTEQIQAVIDLIPPLVKLLEVAEDKTKKEACWAISNASSGGLQRPDIIRYLVSQGCIKPLVTLDALENILKMGEADKEARGLNINENADFGGMEKIFNCQEKAYKIIETY---F
5PROSPECT21xm9A0.1030.9761.552threading_5PKAVQYLSYQAIGAYYIQHSAKQQVYQLGGICKLVDLLRSPN--------QNVQQAAAGALRNLVFRSTTNKLETRRQNGIREAVSLLIQKQLTGLLWNLSLKEELIADALPVLADRVIIPFSGWCVVDPEVFFNATGCLRNLSSADAGRQTMRNYSGLIDSLMAYVQNCVAASRCDDKSVENCMCVLHNLSYRLDAEVPTRYRQLEYNASDAIRTYLNLMGKSKKDATLEACAGALQNLTASKGLMSSGMSQLIGIARLLQSGNSDRSGASLLSNMSRHPLLHRVMGNQVFPEVTRLLTSHTGNTSNSEDILSSACYTVRNLMAAEAARLLLSDMWL
6SPARKS2xwub0.0650.9940.758threading_6VPLQDCEALIQAAFAA-LQDSELFDSSVEAIVNAISQPDAQRYVNTLLKLIPLVLGLQEQLRQAVGDMETSHGICRIAVALGEHSRALLDQVEHWQSFLALVNMIMFCTGIPGHYVNETFEAEKQAVYQQVYRPVYFQLVDVLLHKADEEYGFWFRIYRVDISDTLMYVYEMLGAELKLGRLLTSYSWHTEALLYGFQSIAETINYSDVVPGLIGLIPRISISNVQLADTVMFTIGALSEWLADHPVMINSVLPLVLHAGNPELSVSSVSTLKKICRECKYDLPPYAANIVAVSQDVLMKQIHKTSQCMWLMQALGFLLSALQVEEILKNLHSLISP-
7PROSPECT23a0oA30.1030.8911.498threading_7GRSARHAAALSAFADAVAKDPNHCGWAEFYEKSVEPWLERPVMPEPQPYPNN-------------TRVATLWRQM-----YIDCQEVIYAIRHLAIAGRVLASRKWLLAVAAWDTKGATSRAYN------DEAGFRVVVALAWGYDWLYDHLSEDERRTVRSVLLERTREVADHVIAHARIHVFPYDSHAVRSLSAVLTPACIALQGESAGEWLDYTVEFLAAEGPHYWMTGMAYLIEAANLIRSYIGYDLYQRPFFQNTTLGDLPGLKLGYNVRQFAGVTGN----GHYQWYFDHIKADATGTEMAFYNYGWWDL---------NFDDLVYRHDYPQ
8PPA-I3g61A10.0890.9260.884threading_8DRLYMLVGTLAAIIHGVALPLMMLIFGDMTDSFASVGNVSKNSTNMSEADKRAMFAKLEEEMTT----YAYYYTGIGAGVLIVAYIQVSFWCLAAGRQIHKIRQKFFHAIMNQEIWFDVHDV------------GELNTRLTDDVSKINEGIGDKIGMFFQAMATFFGGFIIGFTRIGQVLTVFF---SVLIGAFSVGQASPNIEAFANARGAAYEVFKIIDNKQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFRTVVSLTREQKFETMYAQSLQIPYRNAM-----KKAHVFGITFSFTQAMMYFSYAACFRFGAYL-
9HHPRED-l1q16_C0.0960.5830.533threading_9-------------------------------------------------------------------------------QFLNMFFFDIYPYIAGAVFLIGSWLRYDYGQYTWRAASSQ------MLDRKGMNLASNLFHIGILGIFVGHFFGWLPMAGASGVLCLIGGVLLLKRRLFSPRVRATTTGADILILSLLVIQCAL-----GLLTIPFS----AQHMDGSEMMKLVGWAQSVV---TFH--------GGA--SQHLDGVA-FIFRLHLVLGMTLFLLFPFSRPVEYLTR-----KYQLVRARH----------------------------
10HHPRED-g2nwl_A0.1130.8610.531threading_10-YPVILIGILGAIVGLILGHAAVHTYVKPFGDLFVRLLKML---VMPIVFASLVAVTLGIIMARLFNPGAGIH-----PPLVHILLDIVPTNPFGALIILGIAITYLMNSENEKVRK-----SAETLL--D-AINGLAEAMYKIVNGV---MQYAPIGVFALIAYV----MAEQG----V----HV--VGELAKVTAAVYVGLTLQILL---VYFVLL-KIYGIDPISFIKHAAMLTAFVTR-----SSSGTL-PVMRVAKEMGISEGIYSFTLPLGATINMDGTALYQGVC--TFFIANALGSHLTVGQQLTIVLTAVLASIGTAAIAMVLH-SVGL

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.408 to 2qypB
SCOP code=a.64.1.1
TM-score=0.773 to 1ialA
SCOP code=a.118.1.1
TM-score=0.808 to 1t5jA
SCOP code=a.209.1.1
TM-score=0.700 to 1ialA
SCOP code=a.118.1.1
TM-score=0.441 to 1sziA
SCOP code=a.24.23.1