Template-based Modeling Results for YGCL_ECOLI


  Submitted Primary Sequence

>Length 502
MNLLIDNWIPVRPRNGGKVQIINLQSLYCSRDQWRLSLPRDDMELAALALLVCIGQIIAPAKDDVEFRHRIMNPLTEDEFQQLIAPWIDMFYLNHAEHPFMQTKGVKANDVTPMEKLLAGVSGATNCAFVNQPGQGEALCGGCTAIALFNQANQAPGFGGGFKSGLRGGTPVTTFVRGIDLRSTVLLNVLTLPRLQKQFPNESHTENQPTWIKPIKSNESIPASSIGFVRGLFWQPAHIELCDPIGIGKCSCCGQESNLRYTGFLKEKFTFTVNGLWPHPHSPCLVTVKKGEVEEKFLAFTTSAPSWTQISRVVVDKIIQNENGNRVAAVVNQFRNIAPQSPLELIMGGYRNNQASILERRHDVLMFNQGWQQYGNVINEIVTVGLGYKTALRKALYTFAEGFKNKDFKGAGVSVHETAERHFYRQSELLIPDVLANVNFSQADEVIADLRDKLHQLCEMLFNQSVAPYAHHPKLISTLALARATLYKHLRELKPQGGPSNG
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MNLLIDNWIPVRPRNGGKVQIINLQSLYCSRDQWRLSLPRDDMELAALALLVCIGQIIAPAKDDVEFRHRIMNPLTEDEFQQLIAPWIDMFYLNHAEHPFMQTKGVKANDVTPMEKLLAGVSGATNCAFVNQPGQGEALCGGCTAIALFNQANQAPGFGGGFKSGLRGGTPVTTFVRGIDLRSTVLLNVLTLPRLQKQFPNESHTENQPTWIKPIKSNESIPASSIGFVRGLFWQPAHIELCDPIGIGKCSCCGQESNLRYTGFLKEKFTFTVNGLWPHPHSPCLVTVKKGEVEEKFLAFTTSAPSWTQISRVVVDKIIQNENGNRVAAVVNQFRNIAPQSPLELIMGGYRNNQASILERRHDVLMFNQGWQQYGNVINEIVTVGLGYKTALRKALYTFAEGFKNKDFKGAGVSVHETAERHFYRQSELLIPDVLANVNFSQADEVIADLRDKLHQLCEMLFNQSVAPYAHHPKLISTLALARATLYKHLRELKPQGGPSNG
CCCCCCCEEEEEECCCCEEEEECHHHHHCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEEECCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MNLLIDNWIPVRPRNGGKVQIINLQSLYCSRDQWRLSLPRDDMELAALALLVCIGQIIAPAKDDVEFRHRIMNPLTEDEFQQLIAPWIDMFYLNHAEHPFMQTKGVKANDVTPMEKLLAGVSGATNCAFVNQPGQGEALCGGCTAIALFNQANQAPGFGGGFKSGLRGGTPVTTFVRGIDLRSTVLLNVLTLPRLQKQFPNESHTENQPTWIKPIKSNESIPASSIGFVRGLFWQPAHIELCDPIGIGKCSCCGQESNLRYTGFLKEKFTFTVNGLWPHPHSPCLVTVKKGEVEEKFLAFTTSAPSWTQISRVVVDKIIQNENGNRVAAVVNQFRNIAPQSPLELIMGGYRNNQASILERRHDVLMFNQGWQQYGNVINEIVTVGLGYKTALRKALYTFAEGFKNKDFKGAGVSVHETAERHFYRQSELLIPDVLANVNFSQADEVIADLRDKLHQLCEMLFNQSVAPYAHHPKLISTLALARATLYKHLRELKPQGGPSNG
5422211100011242231110102101123311201122221100000000000110010322210231032212231023002100300112323110121221323322102200120112221200122232320000000000000102021222113111411100000020120100000100223313331133232331011232232332111221000200011000010023222030100133221100000123121213111121111022223323233310222222110000020001222333323311100210230233210000000011220000102220110231123003002200210210120013001100321333313222122331021201220120002001302333133001201220120012002301232232131011001011101320331233223344
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMNLLIDNWIPVRPRNGGKVQIINLQSLYCSRDQWRLSLPRDDMELAALALLVCIGQIIAPAKDDVEFRHRIMNPLTEDEFQQLIAPWIDMFYLNHAEHPFMQTKGVKANDVTPMEKLLAGVSGATNCAFVNQPGQGEALCGGCTAIALFNQANQAPGFGGGFKSGLRGGTPVTTFVRGIDLRSTVLLNVLTLPRLQKQFPNESHTENQPTWIKPIKSNESIPASSIGFVRGLFWQPAHIELCDPIGIGKCSCCGQESNLRYTGFLKEKFTFTVNGLWPHPHSPCLVTVKKGEVEEKFLAFTTSAPSWTQISRVVVDKIIQNENGNRVAAVVNQFRNIAPQSPLELIMGGYRNNQASILERRHDVLMFNQGWQQYGNVINEIVTVGLGYKTALRKALYTFAEGFKNKDFKGAGVSVHETAERHFYRQSELLIPDVLANVNFSQADEVIADLRDKLHQLCEMLFNQSVAPYAHHPKLISTLALARATLYKHLRELKPQGGPSNG
1PROSPECT21kwha0.0780.8391.508threading_1KEATWVTKIHMHFRDKWVWDENWVAKESFRLTNVKLQSVANKAATNSQEQFNLMMASVGGDNLKDKFIQYGQEGAHIKAFFKSHPEVERAIKAPDGNIYFIPYVPDGVKPPQNIDELDPNGNGKADEVPFIDRH-------PDEVFRLVNFWGARSSGSDNYMDFYIDNGRVKHPWAETAFRDGMVAQ----------------------WYKEGLIDKEIFTRKAKAREQMFGGNLGGFT--------------HDWFASTMTFNEGLAKTVPGFKLIPIAPPTNSKGQRWEEDSRQKVRPD--------GWAITVKNKNPVEYFSRPGRDISNFGVPGVTYDIKNGKAVSPQPVNNQLYDMGAQIPIGFWQDYDYERQWTTPEAQAGIDMYVK----GKYVMPGFEGVNMTREERAIYDKYWADVRTYMYEMGQAWGTKDVDKTWDEYQRQLKLRGLY--------------------QVLQMMQQAYDRQYK------N
2PROSPECT21de4c0.0810.8571.492threading_2LY---------------------------------------------WDDLKRKLSEKLDSTDFTSTIKLLNENSYVQKDENLALYVENQFRVKDSAQNSVIIVDKNGRLVYLVENPGGYVAYSKAATVTGKLVHANFGTKKDFE-----------------DLYTPVNGSIVIVRAGKITFAEKVANAESLNAIMDQTKFPIVNAELSFFGHAHLGTGDPYTPGFPSFNHTQFPP-------SRSSGLPNIPVQTISRAAAEKLFGNMEGDCPSDWKTDSTCRMVTSESKNVKLTVSNVLKGFVEPDHYVVVGAQRDAWGPGAAKSGMFSDMVLKDGFQPSRSIIFASWSAGDFGSVGATEWLEGYLSSLHLLYTLIEKTMQNLNKVARAAAEVAGQFVIKLTHDVELNLDYERYNSQLLSFVRDLNQ-YRADIKEMGLSL--QWLYSARGDFFRATSRLTTDFGNAEKTDRFVMKKLNDRVMRVLENLKLRKQNNGAFNI
3PROSPECT21hr6a0.1100.7631.471threading_3AR--TDNFKLSSLANGLKVATSNAETLELLGGNYQCTSSRENLNQDVGKMLQLMSETVRFPK------------ITEQELQEQKLSAEYEIDEVWMKPELV------------LPELLHTAAYSGETLGSPLICPRGLIPSISKYYLLDYRNKFY------------TPENTVAAFVGVPALELTGKYLGDWQSTHPPITKKVAQYTGGESCIPPAPVFGNLPELF-----------HIQIGF---------------------------------------------------EGLPIDHPDIYALATLQTLLGGGGSFSAGGPGKGMYSRLYTHVLNQYYFVENCVAFNHSYSDSGIFGISLSCIPQAAPQAVEVIAQQMYNEDEVSRAKNQLKSSLLMNLES-----------------KLVELEDMGRQVLMHGRKIPVNEMISKIPDDISRVAEMIFTGAGNGKGRATVVMQGDRGSFGDVENVLKAYGL--GNSSS
4PROSPECT21qbkb0.0860.9301.468threading_4EQLNQYPDFN----------------NYLIFVLTKLKSEDEPTRSLSGLILKNNVKAHFQNFP---------NGVTDFIKSECLNNIGDSSPLIRATVGILITTIASKGELQNWPDLLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDRPLNIIHSSPKIRSHAVIISRTQALLHIDSFTENLFALAGDEEPEVRKVLLEVRMDRLLPHHNIVEYLQRTQDACEFWLTLAEQPICKDVLVRHLPKLIPVLVNGKYSDIDIILLKGDVEEDETIPDSEQDIRPRFHRSRTVAQQHDTISDWNLRKCSAAALDVLANVYRDELLPHILPLLKELLFH----------HEWVVKLGAIAEGCQGIPYLPELIPHLIQCALVRSITCWTLSRYAHWVVSQPPDTYLKPLTLDSNKRVQEAACSAFAAYILDTLVFAFSKYQHKNLLILYDAIGTLADSVGHHLNKPESGFLPYCEPVYQRCVNLVQKTLAQALNNAQPDG
5PROSPECT21gw5b0.0960.8271.463threading_5SKYFTTN---------KKGEIFELKAELNNEKVNCMQTDNLELKKLVYLYLMNYAVKDCEDPNPLIRALAVRVDKITEYLCEPLRK------CLKDEDPYVRDINAQMVEDQGFLDSLRDLIADSN--------------PMVVANAVAALSEISESHPNSNLLDLNPQKLLTALNECTEWGQIFILDCLSNYNPKDDREAQSICERVTPRLSHAKFLELLPKDSDYYNMLLKKLAPPLVTLLSGEPEVQYVALRNINLIV-----------------------QKRPEILKQEIKVFFVKYNDPIYVKLEKLDIMIRLASQAN--IAQVLAELKEYATEVDVDFV-------RKAVRAIGRCAIKVEQSAERCVSTLLDLIQTKNYVVQEAIVVIRDIFRKYPNKYESI--------------------IATLCENLDSLDEPDARAAMIWIVIDNADELLESFLEGFHDESTQV------QLTLLTAIVKLFLKKPSETQ
6MUSTER1y3nA0.0960.8530.842threading_6TWVTEKPKIHMHFRDKWVWD-WPVAREVARLKLVGVANRAATNSQEQFNLMMALPDIVGGDNLKDKFIRYGMEGAFIP-LNKLIDQNAPNLKFFKTHPEVQRAITAPDGNIYYLPYVPDGLVSR-RQDWLDKLHLKTPQTVDELYTVLKAFKEKDPNGGKADEIPFINRDPEEVFRLVN------FWGARSTGSNTWMDFYVENGKIKHPFAEVLIDPEIFTRKARSREQTF-------------GNNIGGMTH--DWFASTALFNDALSKNIPGFKLVPMAP--PINSKGQRWEEDARQIPRPDGWAIT-----------ATNKNPVETIKLFDFYFGPKGRELSNFGVPAQPVNNQMYDIGAQIPIGFWQDYEYERQWTNDVALQGIDMYIKN-------YVLPQFTGVNLTVEERIYDKYWPDVKTYMFEMGQSW-TKDPEKTWNDYQQQLKNR------------------FYQVMIVMQKAYDRQY-----------
7SPARKS1ihga0.0640.6870.820threading_7------------------------------------------------------------------------------------------------------SHPSPQAKPS---------NPSNPRVFFDVDIGGERVVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKF----MIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDKEGLLSMANAGS----NTNGSQFFITTVPTPGKHVVFGQVIKGM-GVAKILENVEVKGEKPAKLCVIAECGELKEGDDWGIFPKDGSG------DSHPDFPEDADVDLKDVDKILLISEDLK--------------NIGNTFFKSQNWEMAIKKYTKVLRYVEGSRAAADADGAKLQPVALSCVLNIGACKLKMSD-----------WQGAVDSCLEAL-EIDPSNTKALYRRAQGWQYDQALADLKKAQEIAPEDKAIQAELLKVKQKIKAQKDKEKAAY-----
8PROSPECT23smtA0.0880.7911.447threading_8S------------------------------------------PKEILNLTSELLQK--CSSPAKEWEEY-------VQIRTLVEKIRKKQKGLSVTFDYFPDLKWASENGASVEGFEVNFKEEGFGLRATRDIKAEELGNIALAFHLLCERASPNSFWQPYIQTLPSEYDTPLYLQSTQAIHDVFSQYKNTARQYAYF-------YKVIHANKLPLKDSFTYEDYRWAVSSVTRQNQIPTEDGSRVTLALIPLTNGLITTGYNLEDDRCECVALQDFRAGEQIYIFYGTRSNAESGFFFDNNSHDRVKIK----LGVSKSDRLYAKAEVLAR---AGIPTSSVFALHFTEPPISAQLL---------------------AFLRVFCTEEELKEHLLGDSAIDRIFTLGNSEFPVSWDNEVKLWTFLEDRASLLLKTYKTT-------------IEEDKSVLKNHDLSVRAKAIKLRLLEKAVKSAAVNREYYRQQ------
9PPA-I3iv0A0.0850.8410.818threading_9-------------------------------DFWAQGNET-NAEAFLLSIYNSFRNATSQRPFLTYSGDRCYSTGDKYVAYLANNDGELRNTYPDDARGGLIQWDVFYTAIQDANILLAEIDKVPGDE-----LKRSRFKAEAIFRSLSYFFIVRAFGDVPYYTNAPLPRTNVIVLQNLADLQPLLDDDPGAEVLPWSYSSYSSKGIRASVQFDAQNKEQYYRNVVSLGEELERNNGAYSLLDINRSSVIFAGGSDEGLFEIAQNINFNEIFNAKFSDNVSYSCLNKSPLFCYSGDYLTLFPYEDDARKELWFDEKIYSTSVSSSAPKEI------KKFWNIDTYGNGTITSN------------SGNQIVFRYAGALLLYAEALAALGTNDTKACELLNRVRNRAHASEINTS-------------------------GSELDAIFWERCRELIGEGHYYYDLVRTGKVYNRNYCNPTRTNFNVIHRNALKNNTQIGLNLF
10HHPRED-l2p0t_A0.1430.2510.635threading_10--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LHALVDLGERLTTLKAD---------VLA--------KLPLTDALR-------KALAEAPKHNIARKRHILFIGKL-RDQ-----DQE---------------AILVLLDQLDASTRFHNLERWRDRLIAGDDADLEKFVIEYPDDRQQLRSLIATSRKIFKYIRELDELQ-----

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.670 to 3ck9B
SCOP code=a.118.8.6
TM-score=0.752 to 1y3nA
SCOP code=c.94.1.1
TM-score=0.486 to 2c0mC
SCOP code=a.118.8.1
TM-score=0.575 to 1suvA
SCOP code=i.21.1.1
TM-score=0.887 to 1y3nA
SCOP code=c.94.1.1