Template-based Modeling Results for YGEQ_ECOLI


  Submitted Primary Sequence

>Length 278
MVIYAFNKRLMEYFMKGKSALTLLLAGIFSCGTCQATGAEVTSESVFNILNSTGAATDKSYLSLNPDKYPNYRLLIHSAKLQNEIKSHYTKDEIQGLLTLTENTRKLTLTEKPWGTFILASTFEDDKTAAETHYDAVWLRDSLWGYMALVSDQGNSVAAKKVLLTLWDYMSTPDQIKRMQDVISNPKRLDGIPVQMNAVHIRFDSNSPVMADVQEEGKPQLWNHKQNDALGLYLDLLIQAINTGTINAEDWQKGDRLKSVALLIAYLDKANFYVMEDS
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MVIYAFNKRLMEYFMKGKSALTLLLAGIFSCGTCQATGAEVTSESVFNILNSTGAATDKSYLSLNPDKYPNYRLLIHSAKLQNEIKSHYTKDEIQGLLTLTENTRKLTLTEKPWGTFILASTFEDDKTAAETHYDAVWLRDSLWGYMALVSDQGNSVAAKKVLLTLWDYMSTPDQIKRMQDVISNPKRLDGIPVQMNAVHIRFDSNSPVMADVQEEGKPQLWNHKQNDALGLYLDLLIQAINTGTINAEDWQKGDRLKSVALLIAYLDKANFYVMEDS
CEEEHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCEECHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCHHHHCCCEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MVIYAFNKRLMEYFMKGKSALTLLLAGIFSCGTCQATGAEVTSESVFNILNSTGAATDKSYLSLNPDKYPNYRLLIHSAKLQNEIKSHYTKDEIQGLLTLTENTRKLTLTEKPWGTFILASTFEDDKTAAETHYDAVWLRDSLWGYMALVSDQGNSVAAKKVLLTLWDYMSTPDQIKRMQDVISNPKRLDGIPVQMNAVHIRFDSNSPVMADVQEEGKPQLWNHKQNDALGLYLDLLIQAINTGTINAEDWQKGDRLKSVALLIAYLDKANFYVMEDS
31001102200210130220000000000100203122110113101100212122223210111233121010001012012104221223102001200321330201332200000001123232223120100000000000000012222221012001100200211310320220121233232122212000010223120111023323221022100100000000001002222132332331310200110000011021122344
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMVIYAFNKRLMEYFMKGKSALTLLLAGIFSCGTCQATGAEVTSESVFNILNSTGAATDKSYLSLNPDKYPNYRLLIHSAKLQNEIKSHYTKDEIQGLLTLTENTRKLTLTEKPWGTFILASTFEDDKTAAETHYDAVWLRDSLWGYMALVSDQGNSVAAKKVLLTLWDYMSTPDQIKRMQDVISNPKRLDGIPVQMNAVHIRFDSNSPVMADVQEEGKPQLWNHKQNDALGLYLDLLIQAINTGTINAEDWQKGDRLKSVALLIAYLDKANFYVMEDS
1PROSPECT23a0oA30.1160.9641.208threading_1CGWAEFYEKSVEPWLERPDCQEVIYAIRHLAIAGRVLGRDDLLDASRKWLLAVAAWDTKGATSRAYNDEAGFRVVVALAWGYDWLYDHLSEDERRTVRSVLLER----------TREVADHVIAHARIHVFPYDSHAVRSLSAVLTPACIALQGESDEAGEWLDYTVEFLATHYWMTGMAYLIEIGYDLYQRPFFQNTGRKAPGTRRANFGDDSTLGDLPGLKLGYNVRQFAGVTHYQWYFDHIKADATGTEMAFYNYGWWDLNFDDLVYRHDYPQVE
2HHPRED-l1gai_A0.1930.5971.370threading_2------------------------------------------------------------------------------ATLDSWLSNEATV----ARTAILNNIGAAWVSGADSGIVVASPSTDNP------DYFYTWTRDSGLVIKTLVDFRNG---DTDLLSTIEHYISSQA---IIQGV-SN---PSGDLSSGGLGEPKFNVDE--------TAYTGSWGRPQRDGPALRATAMGQWLDNGYTSAA---TEIVWPLVRNDLSYV--AQYWNQTG-
3HHPRED-g2vn4_A0.1490.5792.298threading_3-------------------------------------------------------------------------------SVDDFISTETPIA----LNNLLCNVGPDRAFGTSAGAVIASPSTI------DPDYYYMWTRDSALVFKNLIDRF------TETYD--------AGLQRRIEQYITA-------QVTLQGPSGSLADGGLPKFELTLKPFTGNWGRPQRDGPALALIGYSKLINNNY---QS--TVSNWPIVRNDLNYVAQY--WNQTGF
4PROSPECT21hzfa0.0720.9531.194threading_4------SPGGVASLLRIYLAPTLAASRYLDKTEQWSTLPPETKDHAVDLIQKQQFRKADGSYAAWLSRDSSTWLTAFVLKVLSLAQEQVSPEKLQETSNWLLSQQQADGSFQDPCP-----VLDRSQGGLVGNDETVALTAFVTIALHHGLAVFQDEGAEPLKQRVEASIS--KASSFLGEKASAGLLGAHAAAITAYALTLTKAPADLRGVAHNNLAAQEWGQAPALWIETTAYALLHLLLHEGKAEADQASAWLTRQQDTVIALDALSAYWIASHT
5HHPRED-l2vn4_A0.1800.5791.230threading_5-------------------------------------------------------------------------------SVDDFIS-----TETPALNNLLCNVGGCRAFGTSAGAVIASPSTID------PDYYYMWTRDSALVFKNLIDRTYDA----GLQRRIEQYIT-------AQVTLQGLSNPSGSL---A------DGSGLGEPKFELTLKPGNWGRPQRDGPALALIGYSKWLNNNYQS----TVSNIWPIVRNDLNYV--AQYWNQTG-
6HHPRED-g2fba_A0.1630.6622.290threading_6-----------------------------------------------------------AYPSFEA--YSNYK--VDRTDLETFL-----DKQKEVLYYLLQNIAEGQFNNGVPGTVIASPSTS------NPDYYYQWTRDSAITFLTVLSE-LEDNNFNTTLAKAV---EYYINTSYNLQRTSN-------------PSGSFDDE-NHKGLGEPKFNTGAWGRPQNDGPALRAYAISRYLNDVNEGKINFSSTEYKNIIKPDLEYVIGY--WDSTGF
7PROSPECT21ct9a10.0650.8811.188threading_7TDKNELRQALEDSVKSDSSIISAITKKYALHSFAVGLPGSPDLKAAQEVANHLG--------------TVHHEIHFTVQEGLDAIRETYDVTTIRASTPMYL--------------MSRKIKAMGIKMVLSGEG-----SDEVFGGYLYFHKAPNAKELHEETVRKLLALHMYDCARANKAMSAWGVDKKFLDVAMRINDKMCKMEKHILRECFEAYLPASVYSWIDTLKEVAAQQVSDQQLETAFPYNTPTSKEAYLYREIFEELFPLPSAAECVPG
8HHPRED-l1lf6_A0.1780.7881.207threading_8YVIKANNNELM--AKRDNVYTALSSNIGWKGYSIGYYKV---NDIM-TDLDENKQMTRIEGAEIDLTKNSEFEIVLSSAKTALELGEDYKANSLYYMMILKASED-----KTNKGAYIASLSIPWGDGQRTGGYHLVWSRDLYHVANAFIA-AGDVDSANRSLDYLAKV------V-----------KDNGM--IPQNTWI--S------------GKP-YWTGIQLDEQADPIILSYRLKRYDLYD----S------LVKPLADFII--KIGPKTG-
9HHPRED-g1gai_A0.1850.6042.289threading_9------------------------------------------------------------------------------ATLDSWLSNEATVA----RTAILNNIGAAWVSGADSGIVVASPSTDN------PDYFYTWTRDSGLVIKTLVDLF-RN-GDTDLLSTIEHYISS----QAIIQGVSNPSG-DLSS--GGLGEPKFN--------VDETAYTGSWGRPQRDGPALRATAMIGLLDNGY---TSAATEIVWPLVRNDLSYVAQY--WNQTGY
10PROSPECT21ezfa0.0670.9171.149threading_10NS-LKTCYKYLNQTSRSMRNAVCIFYLVLRALDTLEDDMTISVEKKVPLLHNFHSFLYQPDWRFMESKEKDRQVLEDFPTISLEFRNLAEKYQCRRMGIGMAEFLDKHVTSEQEWDKYCHYVAG--------------LVGIGLSRLFSASEFEDPLVGTERANSMGLFLQKTNIIRDYLEDQQGGREF--------WPQEVWSRYVKKLGDFAKPENIDLAVQCLNELITNHIPDVITYLSRLRNGAVKIDATNMPAVKAIIYQYMEEIYHRIPTQN

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.599 to 1fp3A
SCOP code=a.102.1.3
TM-score=0.519 to 2g0dA
SCOP code=a.102.6.1
TM-score=0.479 to 1dl2A
SCOP code=a.102.2.1
TM-score=0.893 to 1hzfA
SCOP code=a.102.4.4
TM-score=0.458 to 1dceB
SCOP code=a.102.4.3