Template-based Modeling Results for YGEY_ECOLI


  Submitted Primary Sequence

>Length 403
MAKNIPFKLILEKAKDYQADMTRFLRDMVAIPSESCDEKRVVHRIKEEMEKVGFDKVEIDPMGNVLGYIGHGPRLVAMDAHIDTVGIGNIKNWDFDPYEGMETDELIGGRGTSDQEGGMASMVYAGKIIKDLGLEDEYTLLVTGTVQEEDCDGLCWQYIIEQSGIRPEFVVSTEPTDCQVYRGQRGRMEIRIDVQGVSCHGSAPERGDNAIFKMGPILGELQELSQRLGYDEFLGKGTLTVSEIFFTSPSRCAVADSCAVSIDRRLTWGETWEGALDEIRALPAVQKANAVVSMYNYDRPSWTGLVYPTECYFPTWKVEEDHFTVKALVNAYEGLFGKAPVVDKWTFSTNGVSIMGRHGIPVIGFGPGKEPEAHAPNEKTWKSHLVTCAAMYAAIPLSWLATE
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MAKNIPFKLILEKAKDYQADMTRFLRDMVAIPSESCDEKRVVHRIKEEMEKVGFDKVEIDPMGNVLGYIGHGPRLVAMDAHIDTVGIGNIKNWDFDPYEGMETDELIGGRGTSDQEGGMASMVYAGKIIKDLGLEDEYTLLVTGTVQEEDCDGLCWQYIIEQSGIRPEFVVSTEPTDCQVYRGQRGRMEIRIDVQGVSCHGSAPERGDNAIFKMGPILGELQELSQRLGYDEFLGKGTLTVSEIFFTSPSRCAVADSCAVSIDRRLTWGETWEGALDEIRALPAVQKANAVVSMYNYDRPSWTGLVYPTECYFPTWKVEEDHFTVKALVNAYEGLFGKAPVVDKWTFSTNGVSIMGRHGIPVIGFGPGKEPEAHAPNEKTWKSHLVTCAAMYAAIPLSWLATE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEEECCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCEEEEECCEEEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCEECCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHCCCCEEEECCCCHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHCCC
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MAKNIPFKLILEKAKDYQADMTRFLRDMVAIPSESCDEKRVVHRIKEEMEKVGFDKVEIDPMGNVLGYIGHGPRLVAMDAHIDTVGIGNIKNWDFDPYEGMETDELIGGRGTSDQEGGMASMVYAGKIIKDLGLEDEYTLLVTGTVQEEDCDGLCWQYIIEQSGIRPEFVVSTEPTDCQVYRGQRGRMEIRIDVQGVSCHGSAPERGDNAIFKMGPILGELQELSQRLGYDEFLGKGTLTVSEIFFTSPSRCAVADSCAVSIDRRLTWGETWEGALDEIRALPAVQKANAVVSMYNYDRPSWTGLVYPTECYFPTWKVEEDHFTVKALVNAYEGLFGKAPVVDKWTFSTNGVSIMGRHGIPVIGFGPGKEPEAHAPNEKTWKSHLVTCAAMYAAIPLSWLATE
5543222310121033012200300210030303113133002101300350211102023210000100423200000000000100223313111230111220000100000100000000002102312243200000001232331312001000231123010000020131100100201020101010010011113202000110020001022003312223111301000000011121300001100010001002331131012102200112322220112233322120010212121121313431200200020022113321211101100200000032102000000033320121211020210120020001001210334
1234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123456789012345678901234567890123
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMAKNIPFKLILEKAKDYQADMTRFLRDMVAIPSESCDEKRVVHRIKEEMEKVGFDKVEIDPMGNVLGYIGHGPRLVAMDAHIDTVGIGNIKNWDFDPYEGMETDELIGGRGTSDQEGGMASMVYAGKIIKDLGLEDEYTLLVTGTVQEEDCDGLCWQYIIEQSGIRPEFVVSTEPTDCQVYRGQRGRMEIRIDVQGVSCHGSAPERGDNAIFKMGPILGELQELSQRLGYDEFLGKGTLTVSEIFFTSPSRCAVADSCAVSIDRRLTWGETWEGALDEIRALPAVQKANAVVSMYNYDRPSWTGLVYPTECYFPTWKVEEDHFTVKALVNAYEGLFGKAPVVDKWTFSTNGVSIMGRHGIPVIGFGPGKEPEAHAPNEKTWKSHLVTCAAMYAAIPLSWLATE
1MUSTER3ic1A0.2080.8932.892threading_1----------------MKEKVVSLAQDLIRRPSISPNDEGCQQIIAERLEKLGFQIEWMPDTLNLWAKHGTSEPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIALLITSDEEATAKDGTIHVVETRDEKITYCMVGEPSGDVVKNGRRGSITGNLYIQG----IQYPHLAENPIHKAALFLQELTTYQWDKG-NEFFPPTSLQIANIHAGTG--SVIPAELYIQFNLRYCTEVTDEIIKQKVAEMLEKHNLKYRIEWNLSGKPFLT----------------KPGKLLDSITSAIEETIGITPKAETG-GGTSDGRFIALMGAEVVEFGPLN-STIHKVNECVSVEDLGKCGEIYHKMLVNLLD--
2SPARKS3pfoa0.1940.9605.625threading_2TKSDAITQSLRAAVDRNFNDQVAFLQ-RVQFRSVRGEEAPQQEWLAQQFADRGYKVDTFSAGSQVVATADGKGRSLILQGHIDVVPEGPVDLWSDPPYEAKVRDGWI-GRGAQDKGGVSAIFALDAIRT--AGYAPDARVHVQTVTEEES-TGNGALSTL--RGYRADACLIPEPTGHTLTRAQVGAVWFRLRVRGTPVHVAYSETGTSAILHLIRAFEEYTKELNAQAVGQVKNPIKFNVGIIKGGDWA-SSTAAWCELDCRLGLLTGDTPQEARGIEKCLADAQATDSFLSENPA-------ELVWSGFQADPAVCEPGGVAEDVLTAAHKAAFNAPLDARLSTAVNDTRYYSVDYGIPALCYGPYG-QGPHAFDERIDLESLRKTTLSIALFVAEWCGLR
3PROSPECT23ic1A0.2080.8934.593threading_3M----------------KEKVVSLAQDLIRRPSISPNDEGCQQIIAERLEKLGFQIEWFNDTLNLWAKHGTSEPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIALLITSDEEATAKDGTIHVVEARDEKITYCMVGEPSGDVVKNGRRGSITGNLYIQG----IQYPHLAENPIHKAALFLQELTTYQWD-KGNEFFPPTSLQIANIHAGTG--SVIPAELYIQFNLRYCTEVTDEIIKQKVAEMLEKHNLKYRIEWNLSGKPFLT----------------KPGKLLDSITSAIEETIGITPKAETGGGTSDG-RFIALMGAEVVEFGPLN-STIHKVNECVSVEDLGKCGEIYHKMLVNLL--D
4PPA-I3ic1A0.2060.8934.550threading_4----------------MKEKVVSLAQDLIRRPSISPNDEGCQQIIAERLEKLGFQIEWMNDTLNLWAKHGTSEPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIALLITSDEEATAKDGTIHVVETLDEKITYCMVGEPSGDVVKNGRRGSITGNLYIQG----IQYPHLAENPIHKAALFLQELTTYQWDKG-NEFFPPTSLQIANIHAGTG--SVIPAELYIQFNLRYCTEVTDEIIKQKVAEMLEKHNLKYRIEWNLSGKPFLT----------------KPGKLLDSITSAIEETIGITPKAETGGGTS-DGRFIALMGAEVVEFGPLN-STIHKVNECVSVEDLGKCGEIYHKMLVNLLD--
5HHPRED-l3pfo_A0.2090.9483.019threading_5-TKSDAIQSLRAAVDRNFNDQVAFLQR-VQFRSVRGEEAPQQEWLAQQFADRGYKVDTFSGS-QVVATADSDGRSLILQGHIDVVPEGPVDLWSDPPYEAKVRDGW-IGRGAQD-KGGVSA-IFALDAIRTAGYAPDARVHVQTVTEEESTGNGALSTL-RG--YRADACLIPEPTGHTLTRAQVGAVWFRLRVRGTPVHVAYSETGTSAILSA-HLIRAFEEYTKELNADPFGQPIKFNVGIIKGG-DWASSTAAWCELDCRLGLLTGDTPQEA-RGIEKCLADAQATDSFL---SEN--PAELVWSGF-QADPAVCEPGGVAEDVLTAAHKAAFNAPLDARLSTAVNDTR-YYSVDGIPALCYGPYGQG-PHAFDERIDLESLRKTTLSIALFVAEWCGL-
6HHPRED-g1vgy_A0.1940.8932.859threading_6-----------------TEQSLELAKELISRPSVTPDDRDCQKL-AERLHKIGFAAEEFGNTKNIWLRRGTKAPVVCFAGHTDVVPTGPVEKWDSPPFEPAERDGRLYGRGAAD-KTSIACFVTACERFVAKHPNHQGSIALLITSDEEGDALDGTTKVVKARDELIDYCIVGEPTAD-IKNGRRGSLSGNLTVKGKQGHIAYPHLAINPVHTFAPALLELTQEVWDEG-NEYFPPTSFQISNINGGTGATNVIPGELNVKFNFRFSTESTEAGLKQRVHAILDKHGVQYDLQWSCSGQPFLT----------------QAGKLTDVARAAIAETCGIEAELSTT-GGTSDGRFIKA-AQELIELGP-SNATIHQINENVRLNDIPKLSAVYEGILVRLL---
7SP33pfoa0.1990.9585.875threading_7KSDAI-TQSLRAAVDRNFNDQVAFLQ-RVQFRSVRGEEAPQQEWLAQQFADRGYKVDTFSAGSQVVATADGKGRSLILQGHIDVVPEGPVDLWSDPPYEAKVRDGWI-GRGAQDKGGVSAIFALDAIRTAGYAP--DARVHVQTVTEEESTG-NGALSTL--RGYRADACLIPEPTGHTLTRAQVGAVWFRLRVRGTPVHVAYSETGTSAILHLIRAFEEYTKELNAQAVGQVKNPIKFNVGIIKGGD-WASSTAAWCELDCRLGLLTGDTPQEARGIEKCLADAQATDSFLS-ENPAELVWSGF------QADPAVCEPGGVAEDVLTAAHKAAFNAPLDARLSTAVNDTRYYSVDYGIPALCYGPYG-QGPHAFDERIDLESLRKTTLSIALFVAEWCGLR
8SAM-T993ic1A0.2060.8914.466threading_8----------------MKEKVVSLAQDLIRRPSISPNDEGCQQIIAERLEKLGFQIEWMNDTLNLWAKHGTSEPVIAFAGHTDVVPTGDENQWSSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIALLITSDEEATAKDGTIHVVEMADEKITYCMVGEPSSDVVKNGRRGSITGNLYIQGIQ----YPHLAENPIHKAALFLQELTTYQWDKG-NEFFPPTSLQIANIHAG--TGSVIPAELYIQFNLRYCTEVTDEIIKQKVAEMLEKHNLK---------------YRIEWNLSGKPFLTKP-GKLLDSITSAIEETIGITPKAETGGGTSDGRFIA-LMGAEVVEFGPLN-STIHKVNECVSVEDLGKCGEIYHKMLVNLL---
9MUSTER1vgyA0.1960.8982.806threading_9----------------TETQSLELAKELISRPSVTPDDRDCQK-LAERLHKIGFAAEEFGNTKNIWLRRGTKAPVVCFAGHTDVVPTGPVEKWDSPPFEPAERDGRLYGRGAAD-KTSIACFVTACERFVAKHPNHQGSIALLITSDEEGDALDGTTKVVDVRDELIDYCIVGEPTAVDIKNGRRGSLSGNLTVKGKQGHIAYPHLAINPVHTFAPALLELTQEVWDEG-NEYFPPTSFQISNINGGTGATNVIPGELNVKFNFRFSTESTEAGLKQRVHAILDKHGVQYDLQWSCSGQPFLT----------------QAGKLTDVARAAIAETCGIEAEL-STTGGTSDGRFIKA-AQELIELGPSN-ATIHQINENVRLNDIPKLSAVYEGILVRLL---
10SPARKS3tx8a0.2090.8665.133threading_10---------------DLLGDPIVLTQRLVDIPSPSGQEKQIADEIEDALRNLNLPGVEVFFNNNVLARTNRGLASRVLAGHIDTVPIAD-------NLPSRVEDG-IYGCGTVDKSGLAVYLHTFATLA--TSTELKHDLTLIAYECEEVADHLNGLGHIRDEWLAADLALLGEPTGGWIEAGCQGNLRIKVTAHGVRAHSARSWLGDNAHK-LSPIISKVAAYKAAEVIDGLTYREGLNIVFCESGV-ANNVIPD-LAWNLNFRFAPNRDLNEAIEHVVETLELDG-QDGIEWAVEDGAGGA---------LPGLGQQ--------VTSGLIDAVGREKIRAK-FGWTDVSRFSA--GIPALNFGAGDPSFAHKRDEQCPVEQITDVAAILKQYLSE-----

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.796 to 1vgyA
SCOP code=c.56.5.4
TM-score=0.795 to 1vgyA
SCOP code=c.56.5.4
TM-score=0.730 to 1lfwA
SCOP code=c.56.5.4
TM-score=0.788 to 1vgyA
SCOP code=c.56.5.4
TM-score=0.790 to 1cg2A
SCOP code=c.56.5.4