Template-based Modeling Results for YGFS_ECOLI


  Submitted Primary Sequence

>Length 162
MKSLIIVNPADCIGCRTCEVACVVAHPSEQELNADVFLPRLKVQRLDSISAPVMCHQCENAPCVGACPVGALTMGEQVVQTNSARCIGCQSCVSACPFGMITIQSLPGDTRQQIVKCDLCEQREEGPACVESCPTQALQLLTERELRRVRQQRIVASGENPL
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MKSLIIVNPADCIGCRTCEVACVVAHPSEQELNADVFLPRLKVQRLDSISAPVMCHQCENAPCVGACPVGALTMGEQVVQTNSARCIGCQSCVSACPFGMITIQSLPGDTRQQIVKCDLCEQREEGPACVESCPTQALQLLTERELRRVRQQRIVASGENPL
CCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCEEEEECCCCCCCCCHHHHCCCCCCEEECCCEEEEECCCCCCHHHHHHHCCCCCEEECCCCCCCCCEEEECCCCCCCCCCCHHHHHCCCCCEEEECHHHHHHHHHHHHHHHCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MKSLIIVNPADCIGCRTCEVACVVAHPSEQELNADVFLPRLKVQRLDSISAPVMCHQCENAPCVGACPVGALTMGEQVVQTNSARCIGCQSCVSACPFGMITIQSLPGDTRQQIVKCDLCEQREEGPACVESCPTQALQLLTERELRRVRQQRIVASGENPL
431100001210100300010013033233322111001102123331000101012032000020011201012320010022301001000100111001012222323320000110332331010021011300101223202311122022224334
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMKSLIIVNPADCIGCRTCEVACVVAHPSEQELNADVFLPRLKVQRLDSISAPVMCHQCENAPCVGACPVGALTMGEQVVQTNSARCIGCQSCVSACPFGMITIQSLPGDTRQQIVKCDLCEQREEGPACVESCPTQALQLLTERELRRVRQQRIVASGENPL
1MUSTER2vpzB0.2740.9694.197threading_1MRYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWIREREVYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQTDGLVLVDPKKCIACGACIAACPYDARYLH-----PAGYVSKCTFCAHRGKVPACVETCPTYCRTFGDLEDPESPVAKALKAAERVDV
2SPARKS1h0hb0.2550.9695.145threading_2-SKGFFVDTTRCTACRGCQVACKQWHGNPATPTEVRMHEQEIDGRIDWLFFPDQCRHCIAPPCKATADMSAIIHDDGCVLFTPKDLEDYESVISACPYDVPRKVAE----SNQMAKCDMCIDRGLRPACVTSCPTGAMNFGDLSEMEAMASARLAEIKAAYS
3PROSPECT22vpwB0.2740.9692.990threading_3MRYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWIREREVYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQKDGLVLVDPKKCIACGACIAACPYDARYLHP-----AGYVSKCTFCAHRGKVPACVETCPTYCRTFGDLEDPESPVAKALKAAERVDV
4PPA-I2vpzB0.2680.9697.914threading_4PRYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWIREREVYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQTDGLVLVDPKKCIACGACIAACPYDARYLHP-----AGYVSKCTFCAHRGKVPACVETCPTYCRTFGDLEDPESPVAKALKAAERVDV
5HHPRED-l1kqf_B0.2560.9884.344threading_5KAEVKLIDVSTCIGCKACQVACSEWNDIRDEVGVMRFSETEQNGKLEWLIRKDGCMHCEDPGCLKACPSAGIQYANGIVDFQSENCIGCGYCIAGCPFNIPRLNKEDNRVYK-CTLCVDRVSVGQEPACVKTCPTGAIHFGTKKEMLELAEQRVAKLKARG-
6HHPRED-g2ivf_B0.2590.9754.765threading_6RQLVTVIDLNKCLGCQTCTVACKNIWTKRPGTRWNNVTGGGKWPNPFFFYLARMCNHCTNPACLAACPTGAIYKDNGIVLVDQERCKGHRHCVEACPYKAIYFNPVS----QTSEKCILCYPRGIANACNRQCPGRVRAFGYLDDTTSHVHKLVKKWKALPL
7SP31h0hb0.2550.9694.648threading_7-SKGFFVDTTRCTACRGCQVACKQWHGNPATPTEVRMHEQEIDGRIDWLFFPDQCRHCIAPPCKATADMSAIIHATGCVLFTPKDLEDYESVISACPYDVPRKVAE----SNQMAKCDMCIDRGLRPACVTSCPTGAMNFGDLSEMEAMASARLAEIKAAYS
8SAM-T992vpzB0.2730.9265.236threading_8-RYAMAIDLSLCVGCAACAVACKMENEVPPGNLWIREREVGEYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQKDGLVLVDPKKCIACGACIAACPYDARYLHPAG-----YVSKCTFCAHRGKVPACVETCPTYCRTFGDLEDPESPVAKALKA------
9MUSTER1ti4B10.2190.9573.719threading_9MQYYMVIDVAKCQDCNNCFMGCMDEHELNEGHRWMNIERRERYPRNDINYRPTPCMHCENAPCVA-KGNGAVYQRDGIVLIDPEKAKGKKELLDTCPYGVMYWNE----EENVAQKCTMCAHLPKMPRCAHNCGSFVYEFLK--TTPEAMAKKVEEEGLEVI
10SPARKS2vpwb0.2740.9694.988threading_10MRYAMAIDLSLCVGCAACAVACKMENEVPPGVFNLWIREREEYPNLVVEFRPEQCLHCENPPCVPVCPTGASYQTDGLVLVDPKKCIACGACIAACPYDARYLHP-----AGYVSKCTFCAHRGKVPACVETCPTYCRTFGDLEDPESPVAKALKAAERVDV

  Predicted Tertiary Structure

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TM-score=0.754 to 1ti4B
SCOP code=b.3.5.1
TM-score=0.761 to 1ti4B
SCOP code=b.3.5.1
TM-score=0.828 to 1h0hB
SCOP code=d.58.1.5
TM-score=0.760 to 1ti4B
SCOP code=b.3.5.1
TM-score=0.759 to 1ti4B
SCOP code=b.3.5.1