Template-based Modeling Results for YGFU_ECOLI


  Submitted Primary Sequence

>Length 482
MSAIDSQLPSSSGQDRPTDEVDRILSPGKLIILGLQHVLVMYAGAVAVPLMIGDRLGLSKEAIAMLISSDLFCCGIVTLLQCIGIGRFMGIRLPVIMSVTFAAVTPMIAIGMNPDIGLLGIFGATIAAGFITTLLAPLIGRLMPLFPPLVTGVVITSIGLSIIQVGIDWAAGGKGNPQYGNPVYLGISFAVLIFILLITRYAKGFMSNVAVLLGIVFGFLLSWMMNEVNLSGLHDASWFAIVTPMSFGMPIFDPVSILTMTAVLIIVFIESMGMFLALGEIVGRKLSSHDIIRGLRVDGVGTMIGGTFNSFPHTSFSQNVGLVSVTRVHSRWVCISSGIILILFGMVPKMAVLVASIPQFVLGGAGLVMFGMVLATGIRILSRCNYTTNRYNLYIVAISLGVGMTPTLSHDFFSKLPAVLQPLLHSGIMLATLSAVVLNVFFNGYQHHADLVKESVSDKDLKVRTVRMWLLMRKLKKNEHGE
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480
Download Primary Sequence

  Predicted Secondary Structure

>C-coil;H-helix;E-sheet
MSAIDSQLPSSSGQDRPTDEVDRILSPGKLIILGLQHVLVMYAGAVAVPLMIGDRLGLSKEAIAMLISSDLFCCGIVTLLQCIGIGRFMGIRLPVIMSVTFAAVTPMIAIGMNPDIGLLGIFGATIAAGFITTLLAPLIGRLMPLFPPLVTGVVITSIGLSIIQVGIDWAAGGKGNPQYGNPVYLGISFAVLIFILLITRYAKGFMSNVAVLLGIVFGFLLSWMMNEVNLSGLHDASWFAIVTPMSFGMPIFDPVSILTMTAVLIIVFIESMGMFLALGEIVGRKLSSHDIIRGLRVDGVGTMIGGTFNSFPHTSFSQNVGLVSVTRVHSRWVCISSGIILILFGMVPKMAVLVASIPQFVLGGAGLVMFGMVLATGIRILSRCNYTTNRYNLYIVAISLGVGMTPTLSHDFFSKLPAVLQPLLHSGIMLATLSAVVLNVFFNGYQHHADLVKESVSDKDLKVRTVRMWLLMRKLKKNEHGE
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCEEECCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCC
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480
Download Predicted 3-state Secondary Structure Types

  Predicted Solvent Accessibility

>0-buried to 9-exposed
MSAIDSQLPSSSGQDRPTDEVDRILSPGKLIILGLQHVLVMYAGAVAVPLMIGDRLGLSKEAIAMLISSDLFCCGIVTLLQCIGIGRFMGIRLPVIMSVTFAAVTPMIAIGMNPDIGLLGIFGATIAAGFITTLLAPLIGRLMPLFPPLVTGVVITSIGLSIIQVGIDWAAGGKGNPQYGNPVYLGISFAVLIFILLITRYAKGFMSNVAVLLGIVFGFLLSWMMNEVNLSGLHDASWFAIVTPMSFGMPIFDPVSILTMTAVLIIVFIESMGMFLALGEIVGRKLSSHDIIRGLRVDGVGTMIGGTFNSFPHTSFSQNVGLVSVTRVHSRWVCISSGIILILFGMVPKMAVLVASIPQFVLGGAGLVMFGMVLATGIRILSRCNYTTNRYNLYIVAISLGVGMTPTLSHDFFSKLPAVLQPLLHSGIMLATLSAVVLNVFFNGYQHHADLVKESVSDKDLKVRTVRMWLLMRKLKKNEHGE
55423232322323332223133201002000000100001000000000000221202330001000000000000000100001411213000000001000000001011231011000000000000000001000201211111000000000000002000010100311221010100000000000000013123211100000000000000010122021210220100000210212001000000000000000000100000000020032312243022001010000000000200211100110000000202120000000000000000010010011002100000000000000000020013021222320000000000000001003200330120020002100000000000010001223332322333223432313102101102323333434
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--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480
Download Predicted Solvent Accessibility

  Top 10 Templates

RankMethodTemplateIdentityCoverageN-ZscoreThreading AlignmentMSAIDSQLPSSSGQDRPTDEVDRILSPGKLIILGLQHVLVMYAGAVAVPLMIGDRLGLSKEAIAMLISSDLFCCGIVTLLQCIGIGRFMGIRLPVIMSVTFAAVTPMIAIGMNPDIGLLGIFGATIAAGFITTLLAPLIGRLMPLFPPLVTGVVITSIGLSIIQVGIDWAAGGKGNPQYGNPVYLGISFAVLIFILLITRYAKGFMSNVAVLLGIVFGFLLSWMMNEVNLSGLHDASWFAIVTPMSFGMPIFDPVSILTMTAVLIIVFIESMGMFLALGEIVGRKLSSHDIIRGLRVDGVGTMIGGTFNSFPHTSFSQNVGLVSVTRVHSRWVCISSGIILILFGMVPKMAVLVASIPQFVLGGAGLVMFGMVLATGIRILSRCNYTTNRYNLYIVAISLGVGMTPTLSHDFFSKLPAVLQPLLHSGIMLATLSAVVLNVFFNGYQHHADLVKESVSDKDLKVRTVRMWLLMRKLKKNEHGE
1MUSTER3qe7A0.2760.8283.076threading_1----------------RAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPVLFH-----------INPATVLLFNGIGTLLYLFICKG----KIPAYLGSSFAFISPVLLLL---PLGYEVALGGFIMCGVLFCLVSFIVKKATGWLPPAAMGAIVAVIGLELAGVAAGMAGLLPAEGQTPDSKTIIISITTLAVTVLGSVLFRGFLAIIPILIGVLVGYALSFAMGIVDTTPIINAHWFALPTLY---TPRFEWFAILTILPAALVVIAEHVGHLVVTANIVKKDLRDPGLHRSMFANGLSTVISGFFGSTPNTTYGENIGVMAITRVYSTWVIGGAAIFAILLSCVGKLAAAIQMIPLPVMGGVSLLLYGVIGASGIRVLIEVDYNKAQ-NLILTSVILIIGVSGAKVNIGAAEL---------KGMALATIVGIGLSLIFKLIS------------------------------------
2SPARKS3qe7a0.2820.8305.723threading_2----------------RAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPVLFH-----------INPATVLLFNGIGTLLYLF----ICKGKIPAYLGSSFAFISPVLLLL---PLGYEVALGGFIMCGVLFCLVSFIVGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPAEGQTPDSKTIIISITTLAVTVLGSVLFRGFLAIIPILIGVLVGYALSFAMGIVDTTPIINAHWFALPTLY---TPRFEWFAILTILPAALVVIAEHVGHLVVTANIVKKDLRDPGLHRSMFANGLSTVISGFFGSTPNTTYGENIGVMAITRVYSTWVIGGAAIFAILLSCVGKLAAAIQMIPLPVMGGVSLLLYGVIGASGIRVLIESKVDNKAQNLILTSVILIIGVSGAKVNIGAAEL---------KGMALATIVGIGLSLIFKLIS------------------------------------
3PROSPECT23qe7A0.2800.8304.488threading_3----------------RAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPVLFH-----------INPATVLLFNGIGTLLYLFIC----KGKIPAYLGSSFAFISPVLLLLP---LGYEVALGGFIMCGVLFCLVSFIVGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPAEGQTPDSKTIIISITTLAVTVLGSVLFRGFLAIIPILIGVLVGYALSFAMGIVDTTPIINAHWFALPTLYTPR---FEWFAILTILPAALVVIAEHVGHLVVTANIVKKDLRDPGLHRSMFANGLSTVISGFFGSTPNTTYGENIGVMAITRVYSTWVIGGAAIFAILLSCVGKLAAAIQMIPLPVMGGVSLLLYGVIGASGIRVLIESKVDNKAQNLILTSVILIIGVSGAKVNIGAAEL---------KGMALATIVGIGLSLIFKLI------------------------------------S
4PPA-I3qe7A0.2800.8306.268threading_4----------------RAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPVLFHIN-----------PATVLLFNGIGTLLYLF----ICKGKIPAYLGSSFAFISPVLLL---LPLGYEVALGGFIMCGVLFCLVSFIVKKAGTLFPPAAMGAIVAVIGLELAGVAAGMAGLLPAEGQTPDSKTIIISITTLAVTVLGSVLFRGFLAIIPILIGVLVGYALSFAMGIVDTTPIINAHWFALPTLY---TPRFEWFAILTILPAALVVIAEHVGHLVVTANIVKKDLRDPGLHRSMFANGLSTVISGFFGSTPNTTYGENIGVMAITRVYSTWVIGGAAIFAILLSCVGKLAAAIQMIPLPVMGGVSLLLYGVIGASGIRVLIESKVDYNKQNLILTSVILIIGVSGAKVNIGAAEL---------KGMALATIVGIGLSLIFKLIS------------------------------------
5HHPRED-l3qe7_A0.2800.82412.903threading_5----------------RAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPVLF----HINP-------ATVLLFNGIGTLLYLFI----CKGKIPAYLGSSFAFISPVLLLLPL---GYEVALGGFIMCGVLFCLVSFIVGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLPAEGQT-PDSKTIIISITTLAVTVLGSVLFRGFLAIIPILIGVLVGYALSFAMGIVDTTPIINAHWFALP---TLYTPRFEWFAILTILPAALVVIAEHVGHLVVTANIVKKDLRDPGLHRSMFANGLSTVISGFFGSTPNTTYGENIGVMAITRVYSTWVIGGAAIFAILLSCVGKLAAAIQMIPLPVMGGVSLLLYGVIGASGIRVLIEVDYNK-AQNLILTSVILIIGVSGAKVNI---------GAAELKGMALATIVGIGLSLIFKIS-------------------------------------
6HHPRED-g3qe7_A0.2790.82610.897threading_6----------------RAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPVLF----HINP-------ATVLLFNGIGTLLYLFIC----KGKIPAYLGSSFAFISPVLLLLPL---GYEVALGGFIMCGVLFCLVSFIVGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLPAEGQT-PDSKTIIISITTLAVTVLGSVLFRGFLAIIPILIGVLVGYALSFAMGIVDTTPIINAHWFALP---TLYTPRFEWFAILTILPAALVVIAEHVGHLVVTANIVKKDLRDPGLHRSMFANGLSTVISGFFGSTPNTTYGENIGVMAITRVYSTWVIGGAAIFAILLSCVGKLAAAIQMIPLPVMGGVSLLLYGVIGASGIRVLIKVDYN-KAQNLILTSVILIIGVSGAKVN--I-------GAAELKGMALATIVGIGLSLIFKLIS------------------------------------
7SP33qe7a0.2850.83011.291threading_7----------------RAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPVLFH-----------INPATVLLFNGIGTLLYLF----ICKGKIPAYLGSSFAFISPVLLLL---PLGYEVALGGFIMCGVLFCLVSFIVGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPAEGQTPDSKTIIISITTLAVTVLGSVLFRGFLAIIPILIGVLVGYALSFAMGIVDTTPIINAHWFALPTLY---TPRFEWFAILTILPAALVVIAEHVGHLVVTANIVKKDLRDPGLHRSMFANGLSTVISGFFGSTPNTTYGENIGVMAITRVYSTWVIGGAAIFAILLSCVGKLAAAIQMIPLPVMGGVSLLLYGVIGASGIRVLIESKVDYNKQNLILTSVILIIGVSGAKVNIGAAEL---------KGMALATIVGIGLSLIFKLIS------------------------------------
8SAM-T993qe7A0.2890.8269.369threading_8-----------------AIGVSERPPLLQTIPLSLQHLFAMFGATVLVPVL----FHINP-------ATVLLFNGIGTLLYLFICKG----KIPAYLGSSFAFISPVLLLL---PLGYEVALGGFIMCGVLFCLVSFGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPAEGQTPDSKTIIISITTLAVTVLGSVLFRGFLAIIPILIGVLVGYALSFAMGIVDTTPIINAHWFALPTLYT---PRFEWFAILTILPAALVVIAEHVGHLVVTANIVKKDLRDPGLHRSMFANGLSTVISGFFGSTPNTTYGENIGVMAITRVYSTWVIGGAAIFAILLSCVGKLAAAIQMIPLPVMGGVSLLLYGVIGASGIRVLSKVDYN-KAQNLILTSVILIIGV---------SGAKVNIGAAELKGMALATIVGIGLSLIFKLIS------------------------------------
9MUSTER3qe7A10.2690.4401.214threading_9----------------RAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPVLF----HIN-------PATVLLFNGIGTLLYLF----ICKGKIPAYLGSSFAFISPVLLL---LPLGYEVALGGFIMCGVLFCLVSFIVKKA--------------------------------------------------------------------------------------------------LP---TLYTPRFEWFAILTILPAALVVIAEHVGHLVVTANIVKKDLRDPGLHRSMFANGLSTVISGFFGSTPNTTYGENIGVMAITRVYSTWVIGGAAIFAILLSCV---------------------------------------------------------------------------------------------------------------------------------------
10SPARKS1pw4a0.1010.8651.004threading_10----FKPAPHKARLPAA--EIDPTYRRLRWQIFLGIFFGYAAYYNFALAMPYLVEQGFSRGDLGFALSGISIAYGFSSVSDRSNPRVFLPAGL-----ILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMHWWSQKERGGIVSVWNAHNVGGGIPPLLFLLGMAWFNDWHAYMPAFCAILVALFAFAMMRDTPQ-------------------SCGLPPIEEYKNDTAKQIFMQYV--LPNKLLWYIAIANVFVYLLRYGILDWSPTYLKE-------VKHFALDKSSWAYFLYE--YAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWMNPAGNPTVDMICMIVIGFLIYGPVMLIGLHALELAPKKATAAGFTGLFGYLGGSVAASAIVGYTVDFFDGGFMVMIGGSILAVILLIVVMIGEKRRHEQLLQELVP------------------------

  Predicted Tertiary Structure

Download Model 1 Download Model 2 Download Model 3 Download Model 4 Download Model 5
TM-score=0.423 to 2q6hA
SCOP code=f.54.1.1
TM-score=0.425 to 2q6hA
SCOP code=f.54.1.1
TM-score=0.427 to 2q6hA
SCOP code=f.54.1.1
TM-score=0.436 to 2q6hA
SCOP code=f.54.1.1
TM-score=0.424 to 2q6hA
SCOP code=f.54.1.1